ChIP-Atlas: Target genes

Potential target genes for HOXA3

Query protein: HOXA3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478483 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXA3's Target genes

◢ HOXA3: Average

◣ SRX10478483: Hep G2

◢ SRX10478484: Hep G2

◢ HOXA3: STRING

DHX36
NPAS4
TVP23B
NOC4L
DDX51
IQSEC3
CWC25
TBL3
AP2B1
POT1
TOR1A
SPTY2D1
APTX
STK38L
PRPF38A
ORC1
MRM3
GLOD4
XKR7
CAMLG
PRMT9
UBA52
RTF2
ZNF721
PIGG
MAGOHB
CCDC86
TRIAP1
MTERF4
PDE4A
SF3A1
CCDC157
RRM1
KIF15
KIAA1143
KAT7
NBEAL1
S100A13
CHTOP
DDX18
COPS8
HINT3
MORN4
FANCD2
ZNF593
C1orf232
C9orf72
NARS1
MRPL55
NUP153
SSNA1
ANAPC2
HOMER1
BLOC1S5
RNF166
CTU2
LEMD2
SHLD1
ZNF547
TRAPPC2B
CCDC174
DDX19A
MAP3K13
GALNT11
ZSWIM7
TTC19
IDH3B
SLC30A9
ENOSF1
RRNAD1
ISG20L2
BRAF
HAUS5
MRRF
PRKCSH
CCDC151
ILRUN
ZNF268
COX18
DGUOK
MTURN
SIK1B
SIK1
UBR4
TRMT61B
ING4
SCYL3
PPIG
AIG1
PRRC2C
RNF139
MVK
SLC25A3
RANBP2
YTHDC1
TSSK6
NDUFA13
OGDH
ZNF548
ESYT2
SRRD
HPS4
STX4
WFDC3
DNTTIP1
TMEM91
B9D2
MAGOH
XRCC6
DESI1
METTL3
CATSPERG
ANAPC10
ABCE1
AFTPH
RCE1
CSTF1
AURKA
GTF2H3
EIF2B1
RALGAPA1
MMADHC
RLF
PRR14
CDC5L
SCLT1
C4orf33
C16orf91
VPS37B
LDAH
COX8A
TSSC4
GUSB
MCMBP
IPPK
TRMT10C
FAM149B1
ECD
CCNT1
NAF1
CRADD
TMUB2
TTLL11
NUP214
PSTK
SSU72
YTHDC2
PRPF38B
SF3B5
METTL25
CCDC59
RPS27
PEF1
RPF2
ZBTB40
CCDC25
TXNDC15
LRRC59
PCNX4
RPL9
LIAS
HECA
KIFC1
MIGA1
WDR53
FBXO45
JOSD1
ELL2
OPA3
ATP5MC1
KAT8
TBCCD1
DNAJB11
ZBTB11
HIRIP3
MAP3K2
USP36
SKIV2L
NELFE
ZZEF1
CYB5D2
PSMD8
TM9SF4
TMEM39A
FAM200A
RPL12
LRSAM1
NUP133
ZC3H11A
ZBTB21
TRIP4
RPA2
VPS16
PCED1A
ATP9B
RANBP6
GHITM
CCNL1
NECAP1
INSM2
RBKS
BABAM2
MORF4L1
PARP2
USP31
ATF1
MCM10
COX7A2
NUS1
JOSD2
RFC1
AP1G1
RIF1
TRMO
PPIL4
RBM42
NOLC1
TPT1
H2BC15
H2AC15
CDK11B
CDK11A
ST7L
CAPZA1
BDP1
GTF3C6
XPO6
IMMP1L
ELP4
ELOVL5
TSGA10
RPL21
RPL24
BIRC2
THUMPD1
TUFM
SH2B1
E4F1
MRPS10
CBWD1
PTBP1
GTF3C3
ATG16L1
NCOA5
SNRPB2
COQ7
CYCS
RAD23A
CMTR1
SPRYD4
ADGRG3
SEC23B
RPS7
AARS2
FAM177A1
CCNH
OXSR1
TBP
PSMB1
RCHY1
PDE4DIP
SYAP1
KPNA5
IMPDH2
HACD2
ARG2
ATAD3B
PPP1R15B
NDUFS2
C5orf15
PELP1
N4BP1
ATP6V0A1
ZGRF1
LARP7
N4BP2L2
SSR4
IDH3G
CDK5RAP2
POMZP3
SNU13
ANGEL2
SAR1B
FEM1A
SELENOK
INO80B
CCDC150
RPRD1A
TFCP2
TOMM6
KDM3A
PGBD4
EMC7
AHCYL1
SDF4
B3GALT6
LONP1
CATSPERD
MBD4
IFT122
SCFD1
SLMAP
RBM12
CPNE1
POLR1H
TUBGCP6
CDK5RAP1
NOP9
DHRS1
PSMF1
FBXO38
NDUFB5
MRPL47
CELF1
BAX
THAP4
ATG4B
CSNK1G2
TMEM230
PDE7A
ZNRD2
STK19
DXO
ZNF764
TMEM101
RACGAP1
NUP35
ZNF23
MRPL21
IGHMBP2
PEX12
IMP4
CCDC115
ZNF501
OSBPL11
UBE2J2
RPL23
ZNF426
DHDDS
ZNF300
CREB1
CSDE1
CBWD5
CBWD3
SF3B6
FAM228B
NOP58
TOR1AIP1
GZF1
MZF1
SEPTIN7
TTI1
RPRD1B
IWS1
JARID2
MAP2K1
RBM25
ZNF76
STX16
ZNF274
MMUT
CENPQ
NEK1
ZDHHC7
ERLIN2
PAK1
SRSF5
TPGS1
CCDC124
WDR33
USE1
NCAPH2
LMF2
WDR7
MFSD13A
DNTTIP2
RBSN
C1orf174
PSMB5
LRRC37A3
THOC1
HTATSF1
HES4
GTPBP10
ATXN1L
ZC3H6
DYNC2I2
TRMT44
ACOX3
EFCAB2
BNIP1
TVP23C
COQ9
CIAPIN1
MRPL20
ECH1
SMG5
OTUD6B
NAT10
WARS2
OXA1L
NHLRC1
DHX40
LSG1
HAT1
RRP1B
HSF2BP
VTA1
NMBR
HOOK2
NME1
RPL27
ZNF507
SECISBP2
DCP1A
STRAP
RFX1
PTPN4
PRORP
PPP2R3C
MTF2
GUK1
GOLPH3
NDUFA10
NDUFV1
EXD2
TIMM10B
ARPP19
SETD3
CCNK
DIABLO
SLC17A5
ANAPC11
ALYREF
TRAK2
STRADB
ZNF2
PPWD1
CENPK
RPS6KB2
EIF4A1
ARIH1
MRPL58
FARSA
NGDN
POLR3D
NUDT18
SLC39A9
ERH
ZNF484
RNF40
CCDC189
ERMARD
LYRM1
DCUN1D3
PREPL
CAMKMT
SNRPD1
RNMT
FAM210A
DUS3L
RPL31
SON
GART
NUMA1
LRTOMT
AP5S1
MRPL2
KLC4
RAB22A
ZNF747
PURB
SRCAP
LOC730183
MFSD14B
ACTR5
UBE4A
SNRPC
AASDH
USPL1
HMGB1
OXNAD1
DPH3
KCTD5
KNL1
FDXACB1
C11orf1
ARMC5
NRF1
FASTKD1
CUEDC2
CCDC186
STAU1
DDX27
RAB5A
EFHB
C2orf49
CACYBP
DCTN4
ZFX
CTNNB1
ESCO1
C1D
ERCC5
TTC1
TIGD1
EIF4E2
SECISBP2L
VCPKMT
CHFR
YTHDF3
TEAD1
CTCF
ARF4
ENSA
DDX42
CCDC47
PPP1R21
PAGR1
MFSD14C
HPS5
GTF2H1
SUMO1
RPL13A
CEP350
RPS11
CCAR2
CENPW
RPS28
NDUFA7
PPP2CA
RABGGTA
THAP1
TFIP11
SUPT5H
LRRC29
TAB2
NDUFS5
TBC1D22A
RAB37
MRPL44
LRRC57
HAUS2
CLK1
DLD
OST4
TMEM199
POLDIP2
VPS33A
UTP4
DERPC
CHTF8
PIGU
IPO11
MKS1
ACAD9
MRPL49
FAU
CBWD6
USF1
INTS12
GSTCD
TMEM259
MFN2
PRSS27
ADK
R3HDM2
FRA10AC1
STRIP1
U2AF1L5
U2AF1
ZFPL1
CDCA5
SLX4IP
NDUFB6
TAPT1
SPG11
ZCCHC9
RAB5IF
CHGB
STX18
TMEM131
NUF2
SPTLC1
NUFIP1
GPALPP1
PSKH1
ADPRS
MRPL52
NSMCE3
SAP30BP
RECQL5
ZNF337
RFC3
CCDC71
XRN2
HTR5A
PINX1
TDRD7
SNX5
MGME1
PRPF6
PEX3
ADAT2
LUC7L3
METAP1D
NR3C1
COPS7B
THAP9
SEC31A
UFC1
AKAP9
RPS13
SETD4
IFT172
RFC2
SNF8
POLR2C
NFX1
CDIP1
FBXL19
EMD
TBC1D15
RHOT2
MED23
NDUFAF5
ESF1
CKS2
EXOSC9
IPO4
MAP1LC3B
FBXO31
ZNF614
ALKBH3
BCAS2
PABPN1
PMPCA
ENTR1
ACTR3
EIF1
GARS1
LTV1
MTHFSD
CHCHD5
ABT1
CLASP2
SARAF
EAPP
DUS2
DDX28
ZSCAN9
RBM39
UBAP2L
C1orf43
NAA60
STARD3NL
NDUFS7
MRPS18C
HELQ
ADAT1
EIF3H
MTIF2
COMMD1
CCT4
SRSF11
LRRC40
MRPL4
MANF
PHF20
NSFL1C
HERPUD1
EIF1B
NDUFAB1
DNAJC11
CNOT1
TRIM52
LRRC8A
KYAT1
PLEKHM3
PSMB2
MBIP
TMEM198
CHPF
RAF1
UQCRQ
GDF9
DDX1
GAN
SRPRA
KIAA0895L
ANKRD17
TTC16
PTRH1
WDR75
ZNF165
CIPC
ETF1
MRFAP1
MRPL53
OVCA2
TSR3
GNPTG
ATAD3A
DDX46
ZNF384
KMT2E
CYSTM1
CSNK2A1
TPD52L2
ELOB
NDC80
METTL4
TBC1D2
CAAP1
EPN1
RMDN3
NDUFA12
PRPF8
YWHAE
OPA1
PRPF4
CDC26
FCF1
AREL1
TMEM128
ZNF606
MRPL3
DUS1L
AAR2
DPAGT1
RRP1
SNX13
ADPGK
COMMD2
LAMTOR5
NUP42
NRBF2
MVB12A
WTAP
SOD2
SLC35E1
MDC1
GOSR1
RRP15
RPP14
HTD2
TNRC6A
PPP4C
MUL1
FAM131A
TBC1D17
AKT1S1
C2CD5
KPTN
TP53BP1
CNNM2
DHX15
CREM
TTC17
H4C12
TXNL4A
LMLN
IQCG
UBAP1
MED9
HNRNPA3
TRMT5
SLC38A6
KDM1A
TRUB1
SLC25A44
ABHD16A
BBS1
CEBPZ
EDC3
PFAS
NKIRAS2
DNAJC7
TMEM242
COMMD9
RPS3
PCNP
CCP110
SF3A3
CPEB4
NDUFS3
KBTBD4
SMPD4
MZT2B
WASHC5
NSMCE2
RALGAPB
MFAP3
FAM114A2
TUT1
IFRD2
UQCRB
TSPAN31
ZNF394
FBXL18
FBXW2
NSRP1
ZDHHC3
EXOSC7
YIPF6
KHDC4
ZNF26
UCHL5
RO60
UBXN4
TMEM237
ATRN
FAM227B
DTWD1
RNPS1
NCBP2AS2
NCBP2
TFPT
PRPF31
C12orf43
LEMD3
NOL7
TPM4
COQ5
RRN3
BTF3
RPS8
MIA2
C19orf53
PLD3
C19orf47
SIRT2
NFKBIB
UBE2H
SURF6
PTEN
KLLN
SRSF3
MED25
PPP4R3B
PHB2
PTRHD1
CENPO
EIF3E
DARS2
CENPL
CLUAP1
TAF11
TAB1
EFTUD2
CCDC103
NOL11
SEC23A
EXOSC6
RABGEF1
ANKRD13C
CPPED1
PGAP2
LCLAT1
MANBAL
UQCRFS1
SF3B4
OXSM
NGLY1
ZNF524
FIZ1
ROMO1
GLRA1
FOXJ3
NOL10
MRPS23
SERP1
EIF2A
TERF2
USP42
NOP53
MIB2
RPS21
PPP4R3A
ABHD12
SEC14L1
MZT2A
METTL2A
SMIM26
ZSWIM6
WRAP53
TP53
EXOSC2
CHMP4A
TM9SF1
STK16
GLB1L
WIPF2
SCAF8
SMC3
CPLX2
SLC25A21
UBE2M
GOLGA1
POLR1F
SPHK2
RPL18
LYSMD3
NACA
USP7
IBA57
SASS6
MAPK8IP3
BCL2L13
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
BORCS7
CCDC107
SRRM1
TMEM217
TBC1D22B
RCAN1
SHOC2
BBIP1
QTRT2
CCDC191
STAT3
UTP15
ANKRA2
PSME3
SEC62
PFDN2
NIT1
KLHL12
GOT2
C2orf69
MRPS35
GOPC
THADA
SNAPC5
NECAP2
NUP155
PET117
KAT14
TXNL4B
DHX38
MDN1
MDP1
SNRPB
AQR
MRFAP1L1
POLE4
HEXIM2
DRG2
CRK
ARHGEF7
RPL5
RARA
GAR1
DDX47
NR1H2
TSC2
NTHL1
WDR74
MED18
BLOC1S6
SNX17
EIF2B4
THRAP3
POLR2J3
METTL1
EEF1AKMT3
TAMM41
SLC25A51
MAPKAPK5
RAB11B
AOPEP
CCDC88A
TRMT12
AARSD1
WASL
DDX41
UBE2V2
CFAP20
CDADC1
BUD13
G6PC3
LONP2
ABCC11
NELFA
RING1
ZBTB17
WDR48
SCN11A
PARL
TBRG4
ILF3
TATDN3
NSL1
MED27
WDHD1
SOCS4
PKN2
TOMM22