ChIP-Atlas: Target genes

Potential target genes for HOXA3

Query protein: HOXA3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXA3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXA3's Target genes

◣ HOXA3: Average

◢ SRX10478483: Hep G2

◢ SRX10478484: Hep G2

◢ HOXA3: STRING

DHX36
NPAS4
AP2B1
NOC4L
DDX51
UBA52
PRPF38A
ORC1
CWC25
XKR7
TBL3
RNF151
CCDC86
IQSEC3
STK38L
CAMLG
TOR1A
RRM1
PDE4A
POT1
APTX
HINT3
RNF166
CTU2
KAT7
MRM3
GLOD4
NBEAL1
SPTY2D1
MTERF4
NUP153
TVP23B
PRMT9
HOMER1
MVK
ENOSF1
BRAF
RRNAD1
ISG20L2
LEMD2
RANBP2
S100A13
CHTOP
ZNF593
C1orf232
MTURN
FANCD2
GALNT11
TRIAP1
SF3A1
CCDC157
CSTF1
AURKA
SSU72
BLOC1S5
ZSWIM7
TTC19
ZNF547
TRAPPC2B
ESYT2
KIF15
KIAA1143
RALGAPA1
AIG1
METTL3
MRRF
DDX19A
MAGOHB
MORN4
COPS8
SHLD1
MRPL55
ILRUN
ZNF721
PIGG
VPS37B
PEF1
NARS1
USP36
CCDC174
C9orf72
STX4
SSNA1
ANAPC2
RTF2
TMEM91
B9D2
ZBTB21
PPIG
JOSD1
GTPBP1
OGDH
ELL2
ING4
HIRIP3
RNF139
XRCC6
DESI1
HAUS5
MAP3K13
INSM2
SIK1B
SIK1
MORF4L1
PRKCSH
CCDC151
UBR4
SCYL3
ZNF268
DDX18
COX18
RCE1
ZNF548
PTBP1
PRR14
OXSR1
IDH3B
SLC30A9
ELOVL5
CDC5L
ZZEF1
RBKS
CYB5D2
BABAM2
TM9SF4
TRMT61B
RPA2
MAGOH
CATSPERG
MFF
JOSD2
ASPDH
COQ7
ATP9B
TMUB2
ESCO2
CCDC25
MMADHC
ANAPC10
ABCE1
RPS27
RAB13
HECA
SRRD
HPS4
COX8A
DGUOK
H2BC15
H2AC15
ZBTB40
HES4
RIF1
LIN28A
CRADD
TSSC4
C16orf91
GUSB
STK19
DXO
RLF
PSTK
YTHDC1
NAF1
ATF1
METTL25
CCDC59
ST7L
CAPZA1
SEC23B
WFDC3
DNTTIP1
AFTPH
VPS16
PCED1A
GHITM
YTHDC2
ADGRG3
ZBTB11
TTLL11
PCNX4
SLC25A3
RANBP6
AP1G1
MAP3K2
TRMT10C
FAM177A1
TXNDC15
TMEM39A
POGLUT1
OPA3
TRMO
CCNT1
TSSK6
NDUFA13
LDAH
RPL12
LRSAM1
MCMBP
KAT8
GTF2H3
EIF2B1
RFC1
POLR1H
CSNK1G2
IPPK
SF3B5
THUMPD1
PDE7A
LRRC59
CCNL1
PRRC2C
HACD2
C1orf174
THAP4
HTR5A
GZF1
ATG4B
SEPTIN7
XPO6
PARP2
JARID2
GUK1
PAK1
SCLT1
C4orf33
RPL21
FAM24A
NUP214
RPF2
NECAP1
SKIV2L
NELFE
GTF3C3
NKX1-1
RFX1
PRORP
PPP2R3C
ZNF764
FAM200A
TBCCD1
KIFC1
DNAJB11
IWS1
TPT1
NUDT18
PPIL4
USP31
NOLC1
FEM1A
CDK11B
CDK11A
AP5S1
GTF3C6
CSDE1
TPGS1
IMP4
CCDC115
E4F1
TFCP2
FAM149B1
ECD
RAD23A
RAB37
BIRC2
PSMB5
PRPF38B
PSMD8
NUP133
ZNF747
ZNF426
TRIP4
ZC3H6
CCDC124
CREB1
PREPL
CYCS
CAMKMT
KDM3A
SAR1B
PSMF1
MRPL21
IGHMBP2
TMEM259
CNN2
SDF4
B3GALT6
BDP1
SELENOK
SSR4
IDH3G
STX16
MIGA1
ZGRF1
LARP7
IMMP1L
ELP4
WARS2
RPL9
LIAS
NOP58
RPL24
RBM42
SRSF5
BNIP1
COX7A2
HAT1
SPRYD4
EFCAB2
NOP9
DHRS1
NCOA5
CCNH
NUP35
ATP5MC1
TUBGCP6
ZNF507
PELP1
AARS2
N4BP1
CLK1
SNRPB2
TBP
PSMB1
ECH1
SNRPD1
NUS1
ZDHHC7
NHLRC1
CDK5RAP2
KPNA5
SLC39A9
ERH
ZNRD2
FAM89B
MZF1
POMZP3
DYNC2I2
TMEM230
ARG2
TSGA10
TUFM
SH2B1
ACTR5
MTF2
ZC3H11A
ZBED6
TOR1AIP2
TOR1AIP1
SLMAP
MFSD13A
HOOK2
WDR33
RBM12
CPNE1
THOC1
RBM25
TMEM101
ATP6V0A1
MRPS10
PPP1R15B
CBWD1
PEX12
WBP1
INO80B
LONP1
CATSPERD
BAX
NDUFB5
MRPL47
LRRC37A3
DHDDS
PXT1
KCTD20
DUS3L
RNF40
CCDC189
TOMM6
NDUFS2
ADAMTS4
DNTTIP2
ARMC5
SNU13
SCFD1
AHCYL1
ZNF76
WDR53
FBXO45
TBC1D17
PDE4DIP
AKT1S1
ANGEL2
USE1
EIF4A1
ZNF23
ATG16L1
ZNF501
LSG1
UBE2J2
ATAD3B
SON
GART
MRPL44
RPL23
NDUFS5
N4BP2L2
KNL1
NME1
RPRD1A
RACGAP1
CBWD5
CBWD3
CMTR1
NSFL1C
WDR7
SNRPC
LYRM1
DCUN1D3
TTI1
TEAD1
RPRD1B
CHGB
TRMT44
ACOX3
TVP23C
RPS7
MBD4
IFT122
ARIH1
MCM10
CUEDC2
ENSA
RCHY1
RPS6KB2
OR6B2
NDUFA10
CTNNB1
CCDC150
CACYBP
OXA1L
ADK
SYAP1
ESCO1
FBXO38
RRP1B
PPP2CA
HSF2BP
NCAPH2
LMF2
CDK5RAP1
HTATSF1
GTPBP10
PTPN4
EXD2
C5orf15
TMEM79
SMG5
OTUD6B
STRAP
ZNF2
STX18
CELF1
DDX42
CCDC47
THAP9
SEC31A
NEK1
ARPP19
AASDH
C1D
ZNF274
SF3B6
FAM228B
SECISBP2
ERLIN2
LUC7L3
NDC80
METTL4
C2CD5
HPS5
GTF2H1
FLNA
EMD
PURB
SETD3
CCNK
MRPL20
GLRA1
TRAK2
STRADB
PRRT2
PAGR1
MVP
VCPKMT
NDUFS7
RBSN
MAP2K1
LRRC57
HAUS2
YTHDF3
GOLPH3
RMDN3
PGBD4
EMC7
TRIM52
SLX4IP
MKKS
FBXL19
MRPL2
KLC4
DCP1A
ERMARD
CHD2
NRF1
RNMT
FAM210A
DUS2
DDX28
DHX40
ZNF337
ERCC5
TMEM131
PSKH1
IMPDH2
FDXACB1
C11orf1
NAA60
R3HDM2
PPP1R21
INHBC
FRA10AC1
RABGGTA
LCMT1
PHF20
DCTN4
CBWD6
SRCAP
LOC730183
DDX1
ABT1
TAB2
NR3C1
MRPL4
INTS12
GSTCD
ATXN1L
SLC17A5
RPL27
KMT2E
COMMD1
CCT4
MIA2
MRPL58
TUBB
NDUFB6
MDC1
NDUFAF5
ESF1
BCAS2
SARAF
USPL1
SMIM17
HMGB1
CNNM2
MAP1LC3B
FBXO31
ZFX
MMUT
CENPQ
SETD4
NGDN
OXNAD1
DPH3
DIABLO
CENPW
RAF1
SCAF8
GARS1
DUS1L
TTC1
TBC1D15
DLD
OSBPL11
RPL31
PIGU
SNX5
MGME1
KPTN
NDUFV1
CPLX2
RPS11
RBM39
METAP1D
RAB5A
EFHB
CCAR2
C8orf58
ZNF165
SRSF11
LRRC40
NKIRAS2
DNAJC7
CLASP2
FARSA
CALR
PINX1
COQ9
CIAPIN1
STRIP1
TSPAN31
AGAP2
PEX3
ADAT2
ZNF614
TTC17
IPO11
ZNF300
EAPP
ANKRD13C
NAT10
RAB22A
STARD3NL
SPG11
NFX1
CIPC
PABPN1
DPAGT1
C2CD2L
ZNF484
TDRD1
CCDC186
RPL13A
L1CAM
TIMM10B
CKS2
TDRD7
ACAD9
SPAG4
MFN2
OST4
CTCF
TEKT2
LRRC8A
KYAT1
ADPRS
UFC1
ACTR3
MKS1
PPWD1
CENPK
USF1
TIGD1
EIF4E2
U2AF1L5
U2AF1
MTHFSD
SAMD10
PRPF6
RAB11B
C2orf49
YWHAE
ZNHIT2
MRPL49
FAU
MANF
RPS28
NDUFA7
FASTKD1
VTA1
NMBR
NUF2
CREM
THAP1
ARF4
NDUFA12
UQCRQ
GDF9
ZNF606
IFT172
CHFR
CDIP1
LRP2BP
ANKRD37
ANAPC11
ALYREF
MRPS18C
HELQ
SPTLC1
CYSTM1
TRMT5
SLC38A6
CHCHD5
RALGAPB
MRPL52
AKAP9
PTRHD1
POLR3D
CENPO
TBC1D2
EXOSC9
CPEB4
UBAP2L
SMPD4
MZT2B
C1orf43
XRN2
RHOT2
SRSF3
PRPF8
MFSD14B
NDUFAB1
CELSR3
CPPED1
WDR75
UBE4A
RPL14
ZCCHC9
PDE6D
COPS7B
NUMA1
LRTOMT
VPS33A
MRPL3
AAR2
TPD52L2
ABHD16B
LRRC29
FCF1
AREL1
ZNF384
MDP1
LSM5
CHMP4A
AVL9
RAB5IF
KCTD5
MRPL53
PRSS27
H4C12
EIF1B
ZDHHC3
OPA1
EXOSC7
HEXIM2
ELOB
MED23
ADPGK
PLEKHM3
RFC3
ANKRD17
RFC2
LTV1
TMEM237
SMC3
SUMO1
GOSR1
BBS1
HERPUD1
CEBPZ
NOL7
TBC1D22A
ATRN
WRAP53
TP53
RNPS1
ATAD3A
MTIF2
NELFA
SRPRA
PFAS
CTC1
PGAP2
TMEM198
FBXO34
CHPF
TMEM242
RPS13
IPO4
STAU1
DDX27
UTP4
DERPC
CHTF8
SF3A3
RARA
POLR1F
KCNH7
WDR36
SUPT5H
UBE2V2
TFIP11
MFSD14C
USP7
CCDC88A
SIRT2
NFKBIB
DDX46
MAPK8IP3
ZSCAN9
TXNL4A
POLR2C
LCLAT1
DNAJC11
ALKBH3
WTAP
SOD2
RRP1
COQ5
TMEM199
POLDIP2
PSMB2
CFAP20
MRPS35
FAM187A
EFTUD2
CCDC103
LMLN
IQCG
TATDN3
NSL1
KIAA0895L
FOXJ3
CEP350
ZFPL1
TMEM262
CDCA5
NSMCE3
THADA
ZNF19
COMMD2
UBAP1
ETF1
MRFAP1
CCDC71
PMPCA
ENTR1
PCNP
NRBF2
TRA2B
CSNK2A1
BCL2L13
SNX13
EIF1
RCAN1
ADAT1
FAM131A
DRG2
MBIP
SNAP25
SEC23A
TTC16
PTRH1
EIF3E
DHX15
CAAP1
ADNP
NTSR2
CNOT1
CCDC107
FAM227B
DTWD1
LAMTOR5
ZNF264
TAPT1
SNRPB
ABHD12
TP53BP1
SRRM1
MED25
FUZ
SNF8
SASS6
RPP14
HTD2
ARFGEF2
TFPT
PRPF31
CLTC
ATF6
TPM4
NUFIP1
NCBP2AS2
NCBP2
GPALPP1
TRMT12
SPHK2
RRP15
RPL18
DUSP3
CFAP97D1
MDN1
ZNF394
ZKSCAN5
TMEM128
PET117
KAT14
ZNF410
PRPF4
CDC26
MANBAL
GAN
MED9
LOXL3
DOK1
COMMD9
TACO1
STAT3
NUP42
HNRNPA3
CCDC200
BMS1
NDUFS3
KBTBD4
NUDT3
YIPF6
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TPRN
TMEM203
TAF11
NDOR1
ANKS1A
ATP1B3
MTG1
LEMD3
UBE2H
SLC25A21
OVCA2
ZNF524
TEX46
KDM1A
FIZ1
NOL10
ZNF891
ZNF10
TRUB1
GDE1
CCP110
BTF3
CLUAP1
C16orf90
WASHC5
NSMCE2
TMEM217
TBC1D22B
WDR74
FBXL18
CDC14B
NOP53
SAP30BP
RECQL5
CDADC1
KNOP1
RANBP3
PPP4R3B
CMSS1
SFPQ
SLC25A44
TBC1D13
SEC62
RPS8
GAR1
EXOSC6
DARS2
CENPL
UTP15
ANKRA2
MED20
BYSL
SSBP1
SECISBP2L
PARL
BIRC6
MRFAP1L1
GOT2
ASPSCR1
TBRG4
HNRNPUL1
SURF6
PCIF1
FAM83E
LY6G6F-LY6G6D
LY6G6F
IBA57
GID8
DIDO1
ABHD16A
PTEN
KLLN
UCHL5
RO60
C19orf53
PSME3
FOSB
FBXW2
SMIM26
CWC22
SF3B4
PPP4R3A
EPHA10