ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478563 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◣ SRX10478563: Hep G2

◢ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

NPAS4
XKR7
IQSEC3
LIN28A
FAM24A
CELSR3
INSM2
KCNH7
NKX1-1
HTR5A
GLRA1
RAB37
SMIM17
MTRNR2L2
MSH3
DHFR
MAMDC2
EPHA10
L1CAM
DLGAP3
MTRNR2L1
MTRNR2L8
WDR74
STX5
CPLX2
DUX4
SST
BARHL1
RTBDN
MAST1
CHGB
SCRT1
DGAT1
ZC3H18
LOC102724770
DGCR6
SNAP25
SLC12A5
GDAP1L1
NPPB
HS3ST2
MYT1
BPIFA3
ANK1
MAPK8IP2
SIGLEC10
EAPP
RANBP3
TMEM181
CADM3
SCGN
CHRNB2
UBE2Q1
PTPRN
LHFPL5
CLPS
SLC39A3
SEZ6
ICMT
HES3
DNAJC6
KCNK12
PPP2R2C
CA4
PGBD5
ZNF23
CCDC92B
HPCA
NTSR2
LPIN1
FRG2C
UNC80
AP3B2
CABP7
MTRNR2L9
CHRM4
OGDHL
NRSN1
CHGA
CYP4F3
RBM28
ZFR2
ATCAY
ZFYVE27
PTPRS
CDK5R2
VWC2L
RNF130
GRM1
GPR78
KLF11
SPOP
CEMIP
SCRT2
MMP24
RPF1
SCAMP5
SRRM3
PRMT8
PDE1C
MLN
PIK3R3
VGF
HMGA1
GCFC2
PTMA
CDIP1
HHATL
SEZ6L2
ASPHD1
TMEM179
PCDH8
ST8SIA3
SLC7A6OS
PRMT7
HTR1A
PLEKHM3
STMN3
RTEL1
KCNH6
UGT1A1
PMS2
AIMP2
PPFIA3
C19orf73
CDC16
CCZ1B
JPH3
STAT1
RAP1GAP
LEMD3
POU4F3
MFF
PDE4C
ZNFX1
LHX5
ZSWIM1
SPATA25
NEURL2
CTSA
CTNNA2
LOC112694756
RIPPLY2
CYB5R4
PTPRH
RBM39
LSM12
G6PC3
GTF3C3
C2orf66
S100A8
S100A7A
SCG3
JPH4
SLC18A3
CHAT
GPR6
DLL3
SLC25A21
MARCHF4
KCNAB2
USP30
SVOP
KATNA1
QTRT1
SNTG1
PET117
KAT14
CACNA1B
KDM3A
NME1
HDAC2
SNRPB2
NEUROD1
TAF12
TMEM242
AATF
MUC3A
CENPA
INA
CRH
SULT4A1
PTDSS1
MTERF3
PAX5
INTS5
GANAB
HEATR5A
SAYSD1
RFC1
TMEM230
PCNA
CDS2
MNAT1
SRSF2
MFSD11
GPR158
EPM2A
GOLM1
PRDX1
RESP18
THAP7
P2RX6
NMS
NPDC1
ENTPD2
UTP11
FHL3
SNRPB
FBXL16
SLC7A14
E2F6
CPNE4
SLC9A1
GRIA2
N6AMT1
H4C12
H2BC15
H2AC15
HRH3
H4C11
SPNS2
EVI5
KIF5C
LRIF1
DTD2
TC2N
AKAIN1
TOMM22
TMEM107
H4C3
H1-6
PAQR4
KREMEN2
SHOX2
SPINK1
SPR
MAT2A
FGG
SCIMP
DDX1
CCDC200
GOLGA8A
ABCA3
THOP1
SGTA
OGFOD3
HEXD
HDAC4
C1QL2
FAAH
DNAJC11
STK25
FRG2
UNC13A
XKR4
SLC6A5
STAT3
ELL2
PCSK1
CTDSPL
VPS29
RAD9B
TPH2
MRPL39
KRT39
CCNC
PGF
SRSF6
DNER
PSMD3
PMVK
ARFGAP3
DHDDS
POLR2J3
SIRT4
RNASEH1
ZBTB4
SLC35G6
POLR2A
GLS2
FBXO41
EGR4
PRMT5
PDHB
INSR
BRSK2
PCBP3
SCFD1
TCFL5
SLC45A4
TOMM5
GTF3A
ANKRD34C
IKZF3
ZPBP2
ADGRG6
NUP54
ABCD3
KCNB1
INTS12
GSTCD
SOD2
WTAP
TBC1D14
CDCA7
TTI2
H2BC14
H2AC14
PEX3
ADAT2
HES6
HBQ1
HBA2
HBA1
NDUFAF5
ESF1
NXF1
HCN2
TK2
CKLF-CMTM1
CKLF
DHRS2
ZC3H7A
SKOR1
ZNF513
SNX17
EIF2B4
SLC37A4
AKAP11
RPL31
TRIM67
RAD50
CPQ
NFASC
FEM1B
ID2
ARL6IP1
WDR45B
WDR36
PTPN6
C12orf57
CACNG7
GPSM1
DNLZ
CARD9
METTL15
KIF18A
DRG2
BSN
SEC14L1
PRKDC
MCM4
H1-2
RUNDC3A
MED23
USP48
TGM1
RABGGTA
KIAA0895L
EXOC3L1
E2F4
POLR3D
TAB1
GET4
RRP1B
HSF2BP
IRF9
ACTL6B
LMCD1
RARA
TMC7
RUSF1
CTNNB1
CCDC88A
SRP19
AARS2
CDH4
C14orf93
CDK5RAP1
OPRM1
OPA3
ANKRD36
ACTR3
ZNF473
VRK3
SEH1L
MAPK12
MAPK11
TUBB3
MC1R
CDH18
PRLHR
GMEB2
CSTF1
AURKA
STX16
UNG
TSEN54
LLGL2
CASKIN2
ALKBH2
CLUAP1
C16orf90
ZCCHC7
EBPL
GINS3
LCLAT1
ZSCAN12
SMPD3
SPAG4
POU2F2
ZNF165
OR1F12
GGACT
NSFL1C
GPRIN1
TP53I3
SF3B6
FAM228B
TMEM186
PMM2
TBC1D13
MEST
TSFM
FMNL3
DGAT2
PSMD5
GINS1
INPP1
RPL27
IFI35
RPS7
TIGD1
NR1D1
EIF4E2
SNRPD1
EIF3B
PBX3
TTC26
KANSL3
FER1L5
FAM227B
DTWD1
COG7
DEFB132
ASS1
RAB10
RRBP1
BANF2
SIT1
CCDC107
ARHGEF39
CPNE9
BMS1
GARS1
MRPS15
HMGN3
FAM237A
PHF20
RAB11FIP4
TNXB
C4B_2
C4B
GJA10
RPS6
CLVS1
CTXN2
S100A7
SMARCD2
WNK4
VPS25
MLXIP
LRRC37A3
CNPY3
TEFM
SLBP
TMEM129
TACC3
ACSL6
NCBP3
CLN3
APOBR
YTHDF1
CERS6
FN3K
PTP4A2
TRPM8
RIOK2
NSUN5
NRL
HLTF
EIF4A2
PCK2
NDUFAF3
IMPDH2
DALRD3
RBBP5
REX1BD
DHX40
KIZ
BAIAP2
TEX14
RAD51C
PCSK9
ZBTB33
TM9SF1
IPO4
HSPA1B
NOMO3
ABCC6
ZNF341
PXMP4
NOP14
GRK4
TINF2
GMPR2
FAM187A
EFTUD2
CCDC103
POLE4
HS6ST1
HHIPL1
CCDC85C
RNF103-CHMP3
RMND5A
SHISA7
BRINP1
MTERF4
UGP2
USH1G
OTOP2
FAM177A1
LRP2BP
ANKRD37
H3C3
H2BC3
GGA2
NOS3
KCNH2
WDR35
NDUFAB1
CMIP
H3C4
DPP10
H4C4
H2BC6
TBL3
RPS2
RNF151
NOXO1
TMEM268
TRIM44
SLC35A3
EZH1
STX18
LRRC59
PDE11A
SAMD10
PRPF6
RBM45
NUF2
MDH1B
FASTKD2
STARD13
PLA2G2A
SDHD
RPL10A
EPB41L4B
SPHK1
ELL
NUS1
MTF2
KPNA2
TNFAIP1
IFT20
MFAP3L
LRP6
VARS2
GTF2H4
RHOB
CCL16
CCL14
FUS
KCNH4
HCRT
NDUFB10
F5
COG1
KCNN4
DPYSL4
GRIN1
PEX5L
CDH23
KIF18B
NDUFS7
AP5S1
MED31
C17orf100
DHRS4
ATF7IP2
FAM163B
DLX2
ZNF292
FRG1
USP7
BICDL1
FAM98B
SHF
POLR2J
C8orf37
NOC3L
LTB4R2
LTB4R
CIDEB
TAF5
POLR3E
HSP90AB1
CEACAM5
RBL1
OSTM1
SLC35G2
MRPL44
PSMF1
AURKAIP1
RSPH3
SLC25A10
MRPL12
LDAH
KCNC3
SNAI1
ITPA
DDRGK1
S1PR2
C9orf24
SAR1B
RGPD2
RGPD1
MYORG
NCAN
LTN1
SOGA3
LATS1
PDCD2L
ODC1
MRPL21
IGHMBP2
PNPT1
MTIF2
H3C12
H2BC17
H2AC17
CALM1
SYNJ1
LANCL1
GLS
CPS1
TIA1
PCYOX1
FURIN
ARL14EP
ISM1
DUS2
DPEP2NB
DDX28
PRR3
GNL1
CCDC65
TP53RK
SLC13A3
CMTR2
ARHGAP1
ZCCHC3
C20orf96
DCP1A
CEP295
COPS7A
LTV1
ZNF408
DNAJB3
NEU1
UQCC3
LBHD1
CSKMT
C11orf98
ZNF624
UBXN1
H4C14
H3C15
H3C14
H2AC19
H2AC18
AXIN2
ZBTB22
TAPBP
SMIM40
DAXX
MAP1LC3B
FBXO31
DAGLA
MRPL3
SLC43A3
MRPS10
ESYT3
NANP
DRAM1
RPL13
CNTRL
C5
ACSL4
MARCHF11
ACTA1
CCL20
DCLRE1B
AP4B1
HAL
CTF1
BCL7C
EBAG9
TRAPPC6B
PNN
METAP2
RNF181
HMBS
H2AX
DPAGT1
TOB2
ZNF581
ZNF580
PTCD3
POLR1A
VAMP5
TBCD
ARL4D
SPG11
C10orf88
OSBPL6
CCDC83
CCDC117
LONP1
CATSPERD
NOMO1
COMMD1
MRPL45
TAF6
MBLAC1
CNPY4
R3HCC1
SLC7A6
GDF15
UQCC2
HUS1
TM9SF4
OSGEPL1
RPLP0
GCN1
PPP1R11
RBM34
NUP62
IL4I1
ATF5
FABP1
POLR1H
ANKRD40
TRIM33
RGS20
ATR
GADD45B
VPS16
POLR2C
PCED1A
MST1
SRARP
SNRNP200
MAP3K19
CMTM3
C6orf136
SMIM12
MRPL58
IPO11
USP14
MAN2C1
PGRMC2
BOLA3
DIMT1
NDUFB3
FAM126B
SLC34A1
TASOR2
ANO10
ABHD5
SMC3
UGT2B10
SAMD3
TRMT2A
RANBP1
PRR22
DUS3L
UCKL1
E2F3
ACAD9
TM2D1
SLC16A3
ARFGEF2
AKR1A1
TMEM200A
HBS1L
TOR1AIP2
TOR1AIP1
H4C5
H2BC7
H2AC7
GRIK2
SCAND1
CFAP65
SELENOV
WASHC2C
G2E3
ZNF598
NPW
CACNG3
SNAP47
JMJD4
TCTEX1D2
SHH
TSSK4
FDXR
NPIPA3
NPIPA2
PLA2G10
RRN3
OR2B2
WWP2
NOB1
TMA16
NEK3
ATP5F1E
HID1
CDR2L
WDR6
ADNP
NBPF1
CFL2
POLDIP3
H4C2
H3C2
H2AC4
MCM6
PIGL
NCOR1
EIF2D
COL21A1
TRIP6
SRRT
GLO1
TOMM34
STK4
CYP21A2
TACO1
DUS1L
SLC17A9
PPY
THAP11
PTGES3
CARMIL3
NOP9
DHRS1
STEAP1
APOC3
APOA1
TASOR
DLG2
ZDHHC22
ADCYAP1
RAD9A
PPP1CA
NEPRO
TPBGL
GHSR
HSPA5
SIRT6
DNMT3A
SCN3B
ZFR
RABGAP1L
DRD2
BSX
CITED2
GATAD2A
SNF8
ZNF184
FAM83D
TSG101
MLANA
SYNM
KIAA0513
MIEN1
HERPUD1
GRB7
SLC25A36
TBX10
ITPR1
RPS27L
SETD6
CCT4
XKR9
LACTB2
TSGA10
NOP56
VMP1
PTRH2
MEX3D
LMNB2
PSME3
BECN1
SELENOW
EXOSC6
MRNIP
TMEM222
ZNF264
CBWD5
CBWD3
MOB4
RPL29
BRMS1L
NHLRC1
GFM2
TOM1
UTP14C
RNF227
PLS1
ZGPAT
ARFRP1
NELFA
ELP6
APOB
SKP1
PGAP2
NUBPL
SPTSSA
ZSCAN30
EFCAB13
DNPH1
DHRS4L2
AGGF1
UBL7
ZNF148
ATP2C2
ARSG
BHLHE40
PSMD7
VRK2
GRM4
NEK2
CHID1
AP2A2
SLC39A4
CPSF1
THOC5
CSF3R
GPT2
PBRM1
GNL3
AK2
XYLB
NID1
NOL10
MRPL16
STK19
LOC110384692
DXO
C4A
TMEM106A
ZMIZ1
MRPL30
MITD1
MGAT3
PTH
GTF3C6
SUGCT
MPLKIP
C20orf144
ACTL10
SH3YL1
ACP1
MRM3
GLOD4
FAM53C
CDC25C
ZNF696
NUDT3
RABL2B
NOL7
HECTD1
MAVS
CTR9
IPMK
CISD1
PGGT1B
C16orf89