ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478564 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◢ SRX10478563: Hep G2

◣ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

XKR7
NPAS4
LIN28A
IQSEC3
INSM2
NKX1-1
FAM24A
CELSR3
L1CAM
HTR5A
GLRA1
KCNH7
MAMDC2
RAB37
EPHA10
CPLX2
ZC3H18
DLGAP3
SMIM17
MTRNR2L2
MSH3
DHFR
SCRT1
DGAT1
RTBDN
MAST1
CHGB
MTRNR2L1
BARHL1
MTRNR2L8
DUX4
SST
WDR74
STX5
SNAP25
EAPP
RANBP3
ICMT
HES3
MYT1
LOC102724770
DGCR6
ANK1
LHFPL5
CLPS
MAPK8IP2
SLC12A5
GDAP1L1
HPCA
TMEM181
KCNK12
CADM3
BPIFA3
MMP24
DNAJC6
CA4
NPPB
SRRM3
FRG2C
NTSR2
LPIN1
SCRT2
PPP2R2C
SEZ6
SIGLEC10
GCFC2
CHRNB2
UBE2Q1
PTMA
TMEM230
PCNA
CDS2
GRM1
ZNF23
USP30
SVOP
RIPPLY2
CYB5R4
PPFIA3
C19orf73
CHRM4
RAB11FIP4
CCDC92B
KDM3A
SLC39A3
SCGN
RAP1GAP
PTPRN
LEMD3
HS3ST2
CDIP1
VGF
CABP7
OGDHL
RNF130
PAX5
NRSN1
MUC3A
ODC1
STMN3
RTEL1
UNC80
SLC7A6OS
PRMT7
KLF11
HMGA1
PDE4C
BICDL1
JPH4
PGBD5
CEMIP
HBQ1
HBA2
HBA1
IKZF3
ZPBP2
SCAMP5
MTRNR2L9
ZFYVE27
DLL3
VWC2L
SPNS2
N6AMT1
PMS2
AIMP2
MLN
PDE1C
PTPRH
JPH3
PIK3R3
CHGA
CDCA7
CCDC200
PTPRS
TRIM44
PTP4A2
PRMT8
STAT1
FBXL16
MFF
HDAC2
FUS
SPHK1
HHATL
THOP1
SGTA
ARL4D
PROCR
SEZ6L2
ASPHD1
TASOR2
SLBP
TMEM129
TACC3
CPNE9
DHDDS
LCLAT1
CACNA1B
AP3B2
GPR78
FBXO41
EGR4
SLC18A3
CHAT
C1QL2
CTNNA2
HES6
TAF12
FRG2
EVI5
RFC1
TEX14
RAD51C
GPR6
NEUROD1
TMEM179
NOC3L
RAMAC
TIGD1
NR1D1
EIF4E2
GTF3C3
C2orf66
GJA10
KCNH6
PAQR7
CTF1
BCL7C
CTDSPL
LHX5
DIABLO
TPH2
DNAJC11
RESP18
SCAPER
HCN2
OGFOD3
HEXD
POU4F3
ZFR2
ATCAY
LGALS13
SMARCD2
TINF2
GMPR2
EFHD1
HRH3
KATNA1
RPL31
BCL7B
H4C12
H4C11
H2BC14
H2AC14
THAP7
P2RX6
ZNF473
VRK3
PET117
KAT14
LTB4R2
LTB4R
CIDEB
SLC7A14
SPOP
RBM28
GDI2
SIRT4
LOC112694756
URGCP
UBE2D4
ACSL3
SLC9A1
SCG2
TMEM242
LRP6
C9orf24
TRPM8
MYORG
RNF227
GPRIN1
CEP295
KCNAB2
TMEM107
PRKDC
MCM4
E2F3
MGAT3
TOMM34
STK4
ZNF3
COPS6
H4C14
H3C15
H3C14
H2AC19
H2AC18
KCNN4
CEACAM8
H4C3
H1-6
H2BC15
H2AC15
PODXL2
ADGRG6
MARCHF4
TM9SF1
IPO4
DISP2
TSSK4
USP14
TTI2
OPA3
SMPD3
PDHB
TMEM268
PRRT2
PAGR1
MAZ
MTERF4
PMVK
FAAH
LTV1
ARSG
ADCYAP1
SRSF6
PSMD3
QTRT1
CRH
MAT2A
ARFGAP3
PLEKHM3
SLC45A4
UGT1A1
WDR36
AATF
NEK3
CDK5R2
RNASEH1
HDAC4
ZFP90
DHRS2
SPAG4
MOGAT1
EIF4A3
PRMT5
KPNA2
NCAN
SUPT3H
SOD2
WTAP
RBM39
RAD50
MEX3D
HECTD1
AKAP10
TTI1
RPRD1B
E2F1
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
NMS
DDX1
TSEN54
LLGL2
CASKIN2
PHF20
POLDIP3
SCG3
SULT4A1
IL17RC
FGG
GGACT
PTDSS1
MTERF3
SNRPB2
CDC16
VRK2
EPM2A
MRPL3
MED31
C17orf100
RNF103-CHMP3
RMND5A
SEH1L
ARHGAP1
ZNF408
MTF2
DNER
RGMB
ZBTB4
SLC35G6
POLR2A
CCDC88C
HTR1A
H3C12
H2BC17
H2AC17
GRIK2
S100A8
S100A7A
UTP11
FHL3
BSN
H4C15
TOB1
GOLM1
ESYT3
MDP1
CHMP4A
KCNH4
HCRT
SEC14L1
RIOK2
EPHX2
PCDH8
RGS20
CENPA
ABCA3
RSPH3
NID1
PTPN6
C12orf57
ANKRD36
RTN2
PPM1N
UTS2R
SIT1
CCDC107
ARHGEF39
CNKSR3
CC2D1A
C19orf57
KIF5C
DPP10
ANKRD36C
VPS13A
GRM4
DLG2
RARA
ZDHHC22
UNC13A
TGM1
RABGGTA
CLVS1
GPN1
CCDC121
SLC6A17
SH2D3C
GTF3A
ELOVL3
KIAA0895L
EXOC3L1
E2F4
MVD
TMEM106B
HSP90AB1
NME6
LRP2BP
CCNL1
ANKRD37
ZNHIT3
DNA2
HBM
ATP6V1B2
SNRPB
NANP
C16orf72
AIP
MPPED1
APOLD1
CYP4F3
NSFL1C
NOP56
POLE4
SLC25A21
LRIF1
NDUFS7
ID2
KIFC1
HLTF
FANCL
POLR2J3
NOP14
GRK4
RPLP1
FANCD2
SYNJ1
CFAP65
SRSF7
TSPAN10
NPLOC4
PCSK1
SNTG1
ANKRD34C
CTXN2
HS6ST1
DHRS4
NCL
SNAPC2
CTXN1
SYP
CEACAM18
NBPF1
SCIMP
H1-2
MAPK12
MAPK11
PRRC2B
ANAPC11
ALYREF
EBNA1BP2
CFAP57
ZNF131
POU2F2
LRRC59
SCGB1D2
E2F6
ACSL6
GLUL
GET4
CITED2
THUMPD3
H3C4
DTD2
HHIPL1
CCDC85C
TEDDM1
H4C4
H2BC6
KRI1
CDKN2D
TERF1
CFDP1
MNAT1
NPDC1
ENTPD2
ASS1
NAGK
ZNFX1
TMEM115
NPRL2
CYB561D2
NDUFS3
KBTBD4
FAM180B
ATP5F1E
ZMYND10
RASSF1
PGRMC2
HIRIP3
SLC25A3
CNPY3
RRP1B
HSF2BP
EIF2B3
REX1BD
SPTSSA
KCNC1
NME1
EBAG9
ISM1
GRIA2
XKR4
NELFA
ZNF337
PRG3
POLG2
DDX5
CEP95
DUS1L
BRMS1L
RPS13
SHOX2
NOMO2
GPCPD1
EIF2D
P4HA1
MCM3
AGO2
ANO10
ABHD5
ZCCHC7
ATF7IP2
OSCP1
SLC24A1
TASOR
TEFM
LONP2
ABCC11
IPMK
CISD1
ST8SIA3
FTL
PRDX1
CERS6
SLC25A10
MRPL12
RTTN
ID1
PBRM1
GNL3
NOMO3
ABCC6
H3C3
H2BC3
SELENOV
ZNF579
CNTRL
C5
CCDC83
RPF1
NR1H3
ACP2
NXF1
FOXJ3
TIMM21
FBXO15
CPNE4
AKAIN1
LUC7L
FAM234A
CCDC57
TAS1R3
SLC3A2
DISP3
PRLHR
KIF2C
TK2
CKLF-CMTM1
CKLF
COX18
SMDT1
PHETA2
HMBS
H2AX
DPAGT1
NAGA
THNSL1
C14orf93
HERC3
PYURF
PIGY
LMCD1
TRAPPC6B
PNN
UCKL1
INSR
MIA2
ZNF285
EIF3CL
EIF3C
CCZ1B
CALM1
ZCCHC3
C20orf96
DPYSL4
NOLC1
GATAD2A
ZNF280D
C7orf25
H3-3B
UNK
TMA16
PSMC3IP
TMEM14B
FEM1B
NOL10
C16orf89
ALG1
ZNF628
NAT14
GINS3
STX16
ACTA1
ABCB6
MYBL2
COQ8A
OTOA
TANK
MRPL44
SMAD2
FRA10AC1
PNPO
MOCS3
DPM1
PITRM1
CDK5RAP3
JPT1
SLC17A9
CHID1
AP2A2
EPOP
CKMT1A
TBC1D14
CMTR2
TMEM167B
HNRNPAB
SAR1B
NUP62
IL4I1
ATF5
SLC39A4
CPSF1
SUPT7L
SLC4A1AP
UBE2S
EXOC2
S1PR2
ZNF629
MARCHF11
GOLGA8A
CACNG7
RAD9A
PPP1CA
SCGB1D4
GJD2
GFI1
CALB1
BARHL2
CDK5RAP1
NSUN5
MEIG1
DCLRE1C
RUNDC3A
FAM163B
EFCAB13
PKM
INA
SLC44A1
ZNF296
GEMIN7
TPRA1
PSTK
RPL27
IFI35
CYP21A2
LSM12
G6PC3
OPRM1
METTL2A
SRSF2
MFSD11
AP5S1
TRIM67
TUBB1
CTSZ
KCNIP2
DIDO1
TP53RK
SLC13A3
MAP2K2
HEATR5A
GID8
FN3K
LDAH
PPY
ZKSCAN2
SLC23A3
KIAA1586
PPP1R3C
RETREG2
CNPPD1
POLD2
DDIT4
FURIN
VPS29
RAD9B
ELAC1
DCP1A
ACTL6B
FBLL1
ZSCAN9
SLC6A12
RANBP2
PBX3
C10orf88
CPPED1
ZNF207
C17orf75
RIF1
TMED4
DDX56
BBC3
TUBGCP3
INTS12
GSTCD
MSH5
DDAH2
CLIC1
FAM133B
GLS2
UGDH
SPRYD4
CDIN1
KANSL3
FER1L5
CCDC117
C19orf48
FERMT1
CENPS-CORT
CENPS
ZC3H7A
ATIC
HAUS4
ZNF770
YDJC
CCDC116
TFRC
SSTR5
RPS19
FAM151B
EBPL
MLXIP
ARL17B
NOL7
ARL17A
HINFP
FOXRED2
RIOK1
CAGE1
TEAD3
TXNDC5
KIF2A
HSPA1B
ACAD9
MYBPHL
BRSK2
VCPKMT
ANKHD1-EIF4EBP3
ANKHD1
DGAT2
LDHA
POU4F2
MBTPS2
RPL10A
NDUFAF5
ESF1
CPE
DLX2
SNF8
CNGA3
PYCR1
MYADML2
MAFG
RXRA
ZBTB33
LAPTM4B
PIGL
NCOR1
PSMF1
CPQ
NQO2
ERCC6
ECSIT
NUP54
CDC20
TOMM5
LONP1
CATSPERD
SMC3
USP42
COA7
NET1
METAP1D
KCTD13
TAF3
RNF4
ELOVL1
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
TRIM48
TMC7
PRCD
CD320
LHX3
CYGB
CETN3
TGFBI
H2AJ
STX18
GTF2H2
KRR1
H4-16
THUMPD2
GOLGA4
DUS2
DPEP2NB
DDX28
CAMTA1
SPRYD3
SMAD5
SLC35A3
SNRPD1
PRR22
DUS3L
SCFD1
DHX40
WASHC2C
UBE2V2
MRPL58
TBC1D19
SRP19
AXIN2
CLCN7
SLC25A36
KCNB1
SYNGAP1
PHF1
CUTA
SRP54
YIF1A
TMEM151A
IGFBP4
STXBP1
CTNNB1
TSPO
MCAT
NFATC3
AAR2
AARS2
GGA2
FABP1
TSN
RTL10
GNB1L
GDAP1
LTO1
TIMM22
TCF25
PDP2
GTF2H2C_2
GTF2H2C
MARCHF8
ARL6IP1
JAGN1
FLYWCH1
MTHFD1
RPIA
TBCB
POLR2I
OVOL3
YTHDF3
TIAL1
SH2D2A
NTRK1
STAU1
DDX27
AK2
GTF3C6
TOB2
PSME3
BECN1
IPO7
MCL1
ARL6
UQCC2
TRIP4
CSTF1
AURKA
ZSWIM1
SPATA25
NEURL2
CTSA
TACO1
PCLAF
HNRNPH1
ZNF391
MOB4
SOGA3
SLC17A6
MRRF
SKOR2
TUBA1B
OR1E1
GPC6
DTX1
NGDN
MRPL27
EME1
RPL21
POR
LGALS16
FANCA
HAAO
DNAJB2
BCDIN3D
XKR9
LACTB2
GINS2
SFI1
PNPT1
DPY19L4
UBE3B
KCTD10
USP4
ZNF556
FN1
EIF4ENIF1
EIF2B5
DBI
C2orf76
GOT2
BAIAP2
H4C5
H2BC7
H2AC7
PUM2
STK25
SCAND1
GPSM1
DNLZ
CARD9
NOMO1
NPM1
FAM120B
PTPRK
ZNF248
CBFB
SRSF1
TTC7A
MCFD2
BCKDK
PGLS
GADD45A
DDC
EPB41L4B
MSL2
C4B_2
C4B
NEK10
HASPIN
STK19
LOC110384692