ChIP-Atlas: Target genes

Potential target genes for ZNF558

Query protein: ZNF558
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16498354 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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ZNF558's Target genes

◢ ZNF558: Average

◢ SRX2423956: 293

◢ SRX2423957: 293

◣ SRX16498354: Hep G2

◢ SRX16498355: Hep G2

◢ ZNF558: STRING

NPAS4
XKR7
IQSEC3
LIN28A
RAB37
HTR5A
FAM24A
NKX1-1
INSM2
SMIM17
BARHL1
L1CAM
CELSR3
RANBP3
WDR74
STX5
CPLX2
KCNH7
GLRA1
CHGB
MAMDC2
LHFPL5
CLPS
SIGLEC10
LOC102724770
DGCR6
FRG2C
DLGAP3
RHOG
HPCA
SCRT1
DGAT1
MTRNR2L1
MTRNR2L2
MSH3
DHFR
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
LRRC8D
COX5A
LPIN1
NTSR2
EPHA10
ZC3H18
SCRT2
GDAP1L1
ZNF23
KLF11
NPPB
RTBDN
MAST1
SRRM3
SNAP25
MAPK8IP2
PTPRS
MTRNR2L8
CDIP1
VGF
CADM3
DUX4
KATNA1
UBE2Q1
CHRNB2
MYT1
EAPP
OGDHL
CCDC92B
SPOP
LEMD3
KDM3A
BPIFA3
MMP24
RFC1
UNC80
SLC7A6OS
PRMT7
PMS2
AIMP2
TMEM230
PCNA
CDS2
PTMA
CABP7
RBM28
ARL4D
N6AMT1
PMVK
RNF130
HBQ1
HBA2
HBA1
NOMO3
ABCC6
GCFC2
PTPRN
PAX5
ICMT
HES3
ZPBP2
IKZF3
HMGA1
HDAC2
KCNK12
STAT1
EVI5
SCAMP5
SEZ6
AATF
RAP1GAP
VWC2L
USP14
SLC12A5
ANKRD36
ANK1
SLC39A3
FN3K
ANAPC11
ALYREF
AHCYL1
CENPA
USP30
SVOP
CHGA
PIK3R3
ZFYVE27
MARCHF4
DLL3
STMN3
RTEL1
ANKRD36C
NRSN1
KCNH6
TIGD1
EIF4E2
TGM1
RABGGTA
TPH2
DNAJC6
CA4
PDE1C
RNF187
SCGN
ARFGAP3
PGRMC2
SLC23A3
RETREG2
CNPPD1
PPP2R2C
MLN
SYP
STK25
PCDH8
RAD54L2
CERS6
PPFIA3
C19orf73
CYP21A2
GRM1
H4C12
H2BC15
H2AC15
H4C11
TMEM242
NOC3L
TMEM181
CCDC200
ZNF337
USPL1
HMGB1
RESP18
PGBD5
LRRC59
NDUFAF5
ESF1
DTD2
RPL31
ENO1
ACAD9
SHOX2
LOC112694756
NSUN5
CTDSPL
FRG2
CHRM4
TOMM5
ZSWIM1
SPATA25
NEURL2
CTSA
FMNL3
GTF3A
TMEM129
TACC3
SLBP
SUGP2
ARMC6
PUM2
E2F6
SLC25A36
RSPH3
CEP295
CACNA1B
SEH1L
BCL7B
FBXL16
LTB4R2
LTB4R
CIDEB
WDSUB1
TRIM67
SLC9A1
RNF103-CHMP3
RMND5A
TDRD7
NCOA5
QTRT1
POLE4
FANCL
SELENOV
DNAJC11
MFF
TMX3
CCDC102B
SLC25A10
MRPL12
KCNC3
ACTL6B
ABCA3
CRH
SST
ODC1
SF3A2
PLEKHJ1
PRKDC
MCM4
TINF2
NEDD8-MDP1
NEDD8
GMPR2
UTP11
FHL3
MRPL3
CRLS1
H2BC14
H2AC14
STX18
TTC7A
MCFD2
AKAIN1
POLR2J3
ATP6V1B2
SEC14L1
TASOR2
PSMD7
FAM177A1
CDCA7
TMEM268
NPIPA3
NPIPA2
PLA2G10
CNPY3
ELAVL3
WDR36
FOXRED2
SGTA
NSFL1C
THOP1
PSMD3
SAYSD1
NR1D1
ZFR
DISP2
HDAC4
SLC7A14
CLVS1
SCAND1
DHDDS
PAQR4
KREMEN2
HS3ST2
ACSL6
SLC13A3
BAIAP2
ZCCHC7
DDX1
ENOSF1
PDE4C
NUP62
IL4I1
ATF5
GINS1
SOS1
TTPAL
AP3B2
TCAIM
ZNF3
COPS6
CACYBP
FERMT1
TUBA1B
SYNGAP1
PHF1
CUTA
ZNF473
VRK3
SPNS2
TMEM179
AKAP10
CMTR2
NEUROD1
ST8SIA3
EFCAB13
TM9SF1
IPO4
AAR2
TNXB
SHISA7
MRPL44
INTS12
GSTCD
AIP
USP37
CNOT9
STX16
PET117
KAT14
PLEKHM3
PRMT8
SPTSSA
TBC1D13
YPEL1
LAMP1
PTPRH
SIT1
CCDC107
ARHGEF39
PBX3
PPP1R3C
MFAP3
FAM114A2
SEZ6L2
ASPHD1
SCFD1
HS6ST1
CFDP1
CDK5R2
TSGA10
ZNF292
NHLRC1
SGF29
RSL1D1
CLCN7
TRADD
NOL3
HSF4
FBXL8
POLR3E
PPY
TEFM
NOL7
BICDL1
ATIC
C14orf93
GDI2
CPQ
GRIA2
GPR158
NPDC1
ENTPD2
SLC18A3
CHAT
CYB5R4
RIPPLY2
KIAA0895L
EXOC3L1
E2F4
RNASEH2C
KAT5
RMI2
RRP1B
HSF2BP
NOP56
WASHC2C
SLC25A21
SCAPER
JPH3
DPYSL4
CFAP65
STAT3
CDK5RAP1
TUBB3
MC1R
LDHA
TACO1
PEX3
ADAT2
UNG
ALKBH2
TSEN54
LLGL2
CASKIN2
EIF3C
SCAF11
LMCD1
EIF3CL
SLC44A1
CNTRL
C5
GLS2
MUC3A
MED23
GOPC
EIF4A3
PEDS1-UBE2V1
PEDS1
TBC1D15
DNER
TRIM44
SLC17A9
CYP4F3
CCDC88A
SCAMP4
ADAT3
HAAO
EPM2A
TK2
CKLF-CMTM1
CKLF
DNAJB2
WRNIP1
MYLK4
HECTD1
LTV1
E2F1
KRI1
CDKN2D
MPHOSPH10
MCEE
MTERF4
POLR2D
OSBPL8
NCAN
EZH1
TMEM186
PMM2
ASCC3
PC
LRP2BP
ANKRD37
VRK2
ERMARD
DIABLO
TMEM106B
KANSL3
FER1L5
HEATR5A
COMMD1
CCT4
CPNE4
CFL2
JPH4
XKR4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IRF9
MIPOL1
GJA10
EIF2B3
LSM12
G6PC3
HHATL
MTHFD1L
EXOSC6
LUC7L
FAM234A
WASHC1
PROCR
HCN2
PDHB
GMCL1
ESYT3
DNA2
KCNAB2
SLC30A6
METAP1D
AGMAT
PCSK1
HES6
DCP1A
GTF2H2
TOMM34
STK4
GJD3
H4C14
H3C15
H3C14
H2AC19
H2AC18
NRL
GTF3C3
C2orf66
TCFL5
PCK2
PTDSS1
MTERF3
PHF3
KCTD18
RBM45
PDE11A
RPL37A
ANKRD34C
ZSCAN30
THAP7
P2RX6
RNASEH1
SLC16A3
WDR35
CEMIP
RRN3
RNF166
CTU2
NABP1
NMS
C1QL2
C6orf136
FRA10AC1
MTIF2
MAP2K2
EBAG9
UNC13A
HNRNPF
TRIP4
PCLAF
AARS2
MRRF
POLR1B
UBE2V2
LAP3
GXYLT1
NBPF1
TTC9C
HNRNPUL2
SLC45A4
RAB5IF
ZNF219
TMEM253
EPB41L4B
PNPT1
ABCB6
GET4
TSSK4
OGFOD3
HEXD
DBI
C2orf76
UNC50
COA5
BUD13
MLLT1
WTAP
SOD2
ROMO1
TMEM169
PECR
VTA1
NMBR
APMAP
TAOK2
PLD6
TUBGCP3
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
SPHK1
NT5C
ENTPD6
G2E3
PREPL
CAMKMT
EBPL
AURKAIP1
CSE1L
SRF
CUL9
AP5S1
YDJC
PGD
CCDC116
RUNDC3A
TRMT6
MCM8
NOMO2
MRPL17
EIF3B
RTN2
PPM1N
POU2F2
H3C3
H2BC3
TENT4B
POGK
GGA2
SULT4A1
SNRPB
DHRS4L2
MIEN1
GRB7
GOT2
CCNC
CTNNB1
MRTFB
THNSL1
NUF2
NAGK
HM13
HSPE1-MOB4
HSPE1
HSPD1
ZNF341
GTDC1
TMEM107
PDE6D
COPS7B
GEMIN2
TRIM65
MRPL38
ASS1
PSD4
TASOR
ANKAR
PTP4A2
TRPM8
MARCHF7
RPS15
EXOC2
THUMPD3
TFDP1
ABT1
SNAP47
JMJD4
UNC45B
NLE1
H1-2
SMG1
PSME3
BECN1
PYCR1
MYADML2
MAFG
NME1
MIA2
TIMM23B
PARG
C1QBP
SETD6
OPRM1
LRRC37A3
NHEJ1
FANCA
DNAJA2
HNRNPDL
ENOPH1
RBM12
CPNE1
ATP5F1E
RBL1
BCKDK
TATDN3
NSL1
NCK1
SLC25A13
NET1
RAB11FIP4
ATRN
NDUFS7
ZMYND10
TMEM115
RASSF1
NPRL2
CYB561D2
TSPAN10
NPLOC4
TAF3
TEX46
KDM1A
TIMM22
PSMG4
DPP10
PYGB
CTSE
GUSB
CLU
RANBP2
SLC6A12
ERGIC3
RIOK2
BIRC6
MSH5
DDAH2
CLIC1
RIF1
AGPS
DPY19L4
PRMT5
MOB4
BRMS1L
LONP1
CATSPERD
EFHD1
MTHFD2
SMARCAD1
TBCD
ZC3H6
SLC9A8
KLHL9
CCDC88C
RAD50
COCH
CAB39
HEXB
TXLNA
NEMP2
FOXJ3
MRPL45
CSTF1
AURKA
ZKSCAN2
LCLAT1
MRPL52
MMP14
SLC7A7
REX1BD
KCNH1
CEP131
BNIP3
RPL27
IFI35
SNRPB2
FAM227B
DTWD1
RNPS1
EIF2D
MRPL21
IGHMBP2
PSMF1
GDAP1
SUPT3H
HBS1L
ZFR2
ATCAY
ZCCHC3
C20orf96
CLUAP1
C16orf90
LMLN2
C14orf119
ACIN1
METTL9
WWP2
NOB1
MZT1
BORA
TRA2B
IPMK
CISD1
NSG2
BSN
TPBGL
TMEM177
MARCHF8
HLF
RMND1
ARMT1
ADNP
RIOK1
CAGE1
ZFPM1
ZSWIM7
TTC19
RAB18
MLH3
R3HCC1
ZDHHC14
FAAH
E2F3
MRPL58
ZDHHC22
DHX35
MNAT1
NOP9
DHRS1
DHX40
PPARD
OLA1
CCT2
NCOA3
PCNX4
SIRT4
HEXA
LHX5
GPR78
SIRT1
RINT1
PUS7
RBM34
MOGAT1
SMIM4
RAB4A
NT5DC2
PPM1G
IGF1R
HLCS
TTI1
RPRD1B
MCUR1
IDH3B
PDP2
NFATC2IP
C10orf88
MEIG1
DCLRE1C
PKP4
CCDC148
SOGA3
WDR43
TMEM167B
ERCC5
RPL10A
ZFP1
FUS
NCL
ABHD12
NOMO1
PTGES3
CCNL1
FAM53C
CDC25C
JPT1
GPR6
MRI1
C19orf53
FAN1
SRSF6
ATF7IP2
RPF2
DDX18
ZBTB9
USP42
SPAG4
NUBP1
ADSL
HBM
RPS7
FAM187A
EFTUD2
CCDC103
C10orf95
DDX19A
ANKRD36B
CDK5RAP3
HHIPL1
CCDC85C
FITM2
ZNF843
SPRYD4
NEU4
VPS16
PCED1A
MED31
C17orf100
PAQR7
FBXO41
EGR4
ARIH1
ANO10
ABHD5
HTR1A
LTN1
PSMB5
PSMB11
HDDC2
H4C15
MSL2
AHI1
YTHDF1
ZNF84
ZNF131
NFKBIA
CHEK1
MSH6
SDCBP
SNAI1
PTPN2
GPCPD1
EPHX2
ACTR3
COPS7A
ABCF1
TUBB2A
DDX19B
AARS1
TXNDC5
MTF2
DHRS4
MYORG
C9orf24
FBXW8
UBAP2L
C1orf43
TEKT2
ADPRS
TRNAU1AP
WDFY1
SMIM24
ID1
POLR2C
SMARCAL1
TBCB
POLR2I
OVOL3
STXBP6
AKAP11
KCTD5
NANP
TEAD3
NFAT5
PHF20
THUMPD2
CITED2
POLR2J
NR1D2
NKIRAS1
MRNIP
DRG2
DPY30
CDC16
ARHGDIA
ZP3
AEBP2
TM7SF3
MED21
CBFA2T2
RUVBL1
USP4
PPP4R3B
EEFSEC
MRM3
GLOD4
WASHC4
UBE2N
PRKD3
FOCAD
TUBA4B
TUBA4A
STK16
GLB1L
ZNF628
TWF2
SHQ1
REV1
PPM1M
NAT14
DYRK4
SOST
SNRPD1
TRPM3
TRMT2A
SYN1
RANBP1
PPP1CB
POU4F2
PDS5A
OSTM1
FBLL1
ERN1
CTXN2
CFP
MAPKBP1
DCUN1D5
TRIM8
ACSL3
TIGD2
PRLHR
LENG8
FOXQ1
WFDC3
DNTTIP1
SLC35A3
TMEM18
HNRNPC
ASAH1
UBE2D3
CISD2
SYNDIG1L
DNPH1