ChIP-Atlas: Target genes

Potential target genes for MBD3

Query protein: MBD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19843163 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
MBD3's Target genes

◢ MBD3: Average

◢ SRX19843161: 293

◢ SRX19843162: 293

◣ SRX19843163: 293

◢ SRX3114572: 293

◢ SRX1674505: HeLa

◢ SRX1674506: HeLa

◢ SRX1674507: HeLa

◢ SRX19843164: Hep G2

◢ SRX19843147: IMR-90

◢ SRX19843146: MCF-7

◢ SRX246860: MCF-7

◢ SRX1489433: MDA-MB-231

◢ SRX1489434: MDA-MB-231

◢ SRX246862: MDA-MB-231

◢ MBD3: STRING

TDRD7
GSN
RAB14
MTRNR2L1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NEIL3
FBRS
ZNF555
POLR2J3
SSBP1
ITGB3BP
EFCAB7
GBA
KCTD18
MTDH
GTF2H2
PCDH9
SPATC1L
TXLNA
ANKRD31
P4HA1
MED23
WDR11
CDC73
CAMTA1
JUND
FRA10AC1
INO80C
KCNJ4
HNRNPH1
PAXBP1
CTCF
FAM50B
RHEB
BCL9
TTC26
MMAA
YTHDF2
NSF
ELOVL2
ZNF77
PSEN2
MTF2
TEAD1
C16orf87
CYREN
PGAM5
CDKN1A
PARP1
HINT3
PEX3
ADAT2
FAM117B
DCP1A
DNPEP
CATSPERE
NFIB
NME1
KMT2C
EIF2D
RNF187
GTF2IRD2
AGK
GTF2IRD2B
RGPD8
RGPD5
RGPD6
STX6
RNASEK
C17orf49
IMPACT
KIAA1586
DPY19L4
HIBADH
FAM240C
ASF1A
EFCAB2
GOLGA7
THEM4
POLR3H
TTLL4
SMIM30
ACTG1
MTR
ZSCAN30
NUF2
MRI1
TIMM17A
DCTPP1
DYNC2I1
RGL1
ARPC5
INTS12
GSTCD
SUN2
C18orf21
MYCBP2
TEX19
KAAG1
DCDC2
GCLM
SEC24B
THAP10
LRRC49
COX16
TMEM255A
DSTYK
TBC1D4
BRAF
HSD17B8
RING1
MRPS33
PTEN
KLLN
ZNF341
EPB41L2
PRRC2B
STX18
RIMBP3
NCOA7
PELI2
GTF2H2C_2
GTF2H2C
FRMD3
GRAMD1C
RPRD1A
SLC39A13
SOD2
WTAP
ZNF212
SHISAL2B
TMEM37
B4GALT7
ZSCAN12
HDAC2
CCDC88A
TSNAX
DNAJC5
CDT1
PIKFYVE
SSBP2
UTP3
SEC31A
THAP9
RCOR3
SDE2
TMEM248
UBE2L3
RIMBP3C
RIMBP3B
LRRC37A3
GFM1
DYNC1LI2
COX20
COMMD2
ZNF398
PAFAH2
DCAF10
DISC1
HMGB1
USPL1
HUS1
INTS5
CHD1L
PRKAB2
MDM4
RPL27
PTTG1IP
DDX18
MFSD14A
AARS2
ATR
PIP5K1A
TCTN3
YARS1
S100PBP
IQGAP2
MED18
TARS2
ARHGEF12
NCBP3
PPP1CB
JADE1
ADAMTS17
KHDRBS1
SEC22B
ZSCAN9
POLN
HAUS3
CBWD5
CBWD3
CBWD6
UST
PRSS27
ZER1
SH2B3
NFIA
SERPINB6
SLC24A1
ZBTB45
UBE2I
PLEKHM3
MED4
ABCB10
AEBP2
DUS1L
MRPS31
ZFP37
PRKAG2
CCNC
CLK3
BSDC1
POLA1
ZNF276
VPS9D1
TEX46
KDM1A
ZRANB2
CSK
USP38
DAB1
TATDN3
NSL1
OMA1
SRFBP1
CPE
WDR36
RBM26
BRI3
NBN
REXO4
ADAMTS13
USP32
PPIP5K2
RWDD1
RPS12
SPRY2
KDM5B
MUC12
NCAM1
SLITRK1
SLC25A45
FRMD8
PIEZO1
ZNF391
MTIF2
VPS37B
MAP7
ZNF76
FAM228B
SF3B6
ZC3HC1
ACTR10
FRG1
ANTXR1
EDC4
FBXO34
GFM2
GOLM2
FAM160B1
GMNN
EFNA5
COG2
VPS72
COMMD4
FBXO48
APLF
KLHL20
FAM98A
ZNF786
BNIP1
ABI2
PHLDA3
ANKRD40
DRG2
SETDB1
SH3GLB1
TMEM170B
TARS3
CXCL2
PDE6D
COPS7B
RWDD3
NSFL1C
PAK1
ZNF425
SLC35A4
APBB3
PPP6R1
PPP1CC
SCARB1
SCOC
MAP2
TRAM1
SLC33A1
RABGAP1L
CRB1
LTV1
CCNL1
UCHL5
RO60
SLC25A24
NUP54
FGGY
RBFOX2
AMZ2
TUT1
UBFD1
EARS2
SLITRK5
GLI4
LSM5
AVL9
SF3A3
RBBP5
HIF1AN
MTERF1
BAG6
APOM
DCUN1D2
RASGEF1B
OPRD1
CGGBP1
C3orf38
STUM
RTN4
TXNDC9
EIF5B
FOXJ3
TRNAU1AP
PSMD9
HPD
OTUD7B
KLHDC10
PYURF
PIGY
HERC3
IFT46
DEK
CEP120
PAK1IP1
C6orf52
CCDC8
KCTD3
CDC42BPA
ZBTB18
ATAD3A
RBM45
PDE11A
DZIP3
CIP2A
STAT3
RAB11B
ZFYVE9
CARS2
CTDSP1
TEX38
ATPAF1
SLC22A23
TSGA10
TGDS
TMA16
HEBP2
RPS7
KLHL32
NDUFAF4
VPS29
RAD9B
GORASP2
DYNLL2
PHF10
ZNF839
TMEM161B
VTA1
NMBR
KAT6A
STPG3
NELFB
PGBD1
ARL14EP
MORF4L2
KANSL3
FER1L5
RMND1
ARMT1
KCTD12
ANKRD12
ZCWPW2
AZI2
BAG3
FUNDC2
F8
FNTA
TBC1D13
KLHL12
MOB4
MAP2K1
UPK3BL1
IFITM1
IBA57
IFITM2
CNIH3
PRPF18
BAZ2B
KCTD5
IFITM3
CALM2
MRPL44
XPC
LSM3
DDX1
GTF3C3
TTC4
NAB1
PPP1R11
USP9X
ASPSCR1
NDUFB7
NOL11
SLC25A40
DBF4
MRPL30
MITD1
ARID3B
ZGPAT
ARFRP1
DYNC1I1
WDR70
METTL9
SRSF11
LARP1
SH3GL1
CHAF1A
MIGA1
PRPF40B
ZNF205
COTL1
SRBD1
CRKL
COL23A1
TLR5
IL12B
STMP1
PTGS2
FUT10
PLS1
AKR1B1
SFI1
INTS13
FGFR1OP2
CCDC107
TVP23B
MRPS18C
HELQ
SRSF4
NOTCH2
BLOC1S5
CTNNB1
RGS9
C7orf31
PIGM
CCNI
NOP53
DIAPH1
SCAND1
MTERF4
ATF3
CCDC200
FBXO4
RBM28
ALAD
ESCO1
RSPH6A
EIF4ENIF1
NBPF15
ZNHIT2
MTRES1
TM7SF2
PABPC4
ZBED9
PRMT9
AMOTL1
ACCS
USP1
D2HGDH
CAND1
ZNF609
ALG10
TMEM219
LMBRD1
RHOT2
ARHGDIA
SMIM12
TOX4
RAB2B
DDX59
HNRNPA1L2
LIMK2
RPS3A
MRPL38
KLHL11
NMNAT1
LZIC
SMARCC2
FAM162A
CCDC58
GGTLC3
WDR27
C6orf120
TCF4
DENND4B
TBPL1
YBEY
MCM3AP
FAM207A
ABT1
MRPL1
MRPL40
HIRA
SHTN1
PEAK1
HMG20A
POLR2J2
C3orf33
IRF2BP2
NECAP2
LRRC40
C10orf88
NUDT9
SLC25A32
DCAF13
PDE4DIP
GPAM
POMP
DNMBP
INSIG1
CELF1
TRMT2A
RANBP1
ROR1
ADPGK
ZNF185
PSMD6
LRRC59
TOR1AIP2
TOR1AIP1
SNRPE
DCP1B
AGBL3
EPRS1
MARCHF4
FAM3C
TBC1D9B
BBS5
POLE2
KLHDC1
SMG5
HEATR1
WASHC2A
NCOA2
TMEM79
FARP2
CXXC4
KDM6B
NDUFS7
UBE2N
ZMPSTE24
SGK3
SMIM8
SMARCD1
MND1
UBOX5
FASTKD5
SRCAP
LOC730183
POLI
BAZ2A
ARHGEF17
GAA
ESYT2
THOC5
TRAK2
STRADB
RHOU
OPN3
CHML
SAR1A
CXCL3
PHIP
GTF2I
TACC2
SLK
TOP3B
ZC3H6
RUVBL1
CYB561D1
EEFSEC
NDFIP2
U2SURP
SRF
GLT8D2
HCFC2
SPAG16
BCAT2
H3-3A
POR
EPM2A
SMOC1
TMEM242
SEMA3C
NYAP1
NANOS3
TPRKB
MUC1
KCNH1
PICALM
DNAJB2
SLC44A1
PFDN4
CREBL2
PARL
MYLIP
VPS13D
SLC24A4
BROX
AIDA
USP3
ALG10B
KLHL5
SDHAF3
HPS6
TCF12
MTURN
CNPY1
GRIA2
STX16
MTHFD2L
PRKACB
ULK3
STX4
DDX46
ZNF397
SCAPER
TPGS2
UBE2R2
DGKH
SELENOM
TP53BP2
AIFM1
FAM199X
EBAG9
BANP
NUP107
C1orf21
TUBB
MDC1
ZNF57
DNAJC11
DUSP11
C2orf78
LARS2
WDR26
ELAPOR2
ALMS1
HDDC2
DPEP2
DUX4
ZCCHC4
FAM156A
FAM156B
H4C14
KLHDC9
H4C15
KLHL8
AFTPH
ZNF2
DDB2
DTNA
TBC1D30
GNS
RPAP3
MRPS23
NDUFC2-KCTD14
NDUFC2
ZNF746
ACADM
VPS33A
E2F6
GARS1
ECHDC1
AGL
KDSR
ZNF316
QKI
NOC3L
ZNF282
DENND6B
ZMIZ1
JARID2
MEIS1
AURKAIP1
PGGT1B
CDC37
DBT
OTUB2
GATA2
C16orf72
PAX2
REV1
DRAP1
C11orf68
ERGIC1
FBXW2
TMEM30A
GPC6
USP54
TBC1D19
BBS1
SELENOH
ADSS2
GGACT
TCAF1
CCDC42
FBXW8
CREM
MRPL16
PROS1
CIPC
CALM1
PTCD1
CPSF4
MIA3
DPH5
AKR1B15
AMBRA1
LTBP2
IGF2BP1
ZNF165
RPL5
OGFOD3
HEXD
TBL1XR1
POLK
CERT1
ARHGAP32
PNMA6E
C6orf89
ZKSCAN8
NOXA1
COMMD7
SYNPO2
SLC1A4
GTF2H3
EIF2B1
MCM9
TSC22D1
RPS29
INTS7
DTL
GRK2
FOXN3
STOML1
PML
FARSA
CALR
DCLRE1B
AP4B1
RBM23
PSMG3
RBSN
SMUG1
C11orf49
MICAL3
CDC7
COA6
NOTCH1
TMEM14B
SOS1
MZT1
BORA
RFXANK
BORCS8-MEF2B
BORCS8
UBR2
ITPRIP
FAM76B
CEP57
CASC3
TIPARP
AAR2
NCOR2
TRAF6
RAG1
ARMH3
HSPE1-MOB4
HSPE1
HSPD1
BTBD1
DNAJC10
ZCRB1
PPHLN1
PDZD2
ARPC2
FAF2
USP25
MTRF1L
FBXL3
BOC
TCHH
ATF6
SMARCD2
TESMIN
PPIL1
METTL25
CCDC59
DNAJC25-GNG10
DNAJC25
USP19
ELOVL7
TAB1
B3GALNT2
NUS1
KRIT1
ANKIB1
TIMM23B
PARG
RUVBL2
GYS1
STX7
PXK
HEMK1
C3orf18
RPS20
ERMARD
TOR1A
LNPEP
CALD1
USP40
IL6ST
COBLL1
OTUD4
SHQ1
COMMD6
UCHL3
SCNM1
LYSMD1
NAPEPLD
HDAC1
SLC10A7
JOSD2
ASPDH
DYRK1B
MTARC1
DOCK7
TMEM221
LCOR
CEP85L
ADPRHL1
CERCAM
RARS1
WASHC5
NSMCE2
STAT1
ZSCAN25
KAT2B
TPK1
DEF8
KCNK13
MYO5B
INAFM1
KCNJ8
KXD1
GATAD2A
UTP11
CCNH
GRN
TJAP1
EPHA3
LTN1
NAF1
HNRNPA2B1
CBX3
FAM124A
TPM1
GPR146
IGF2BP3
FNDC1
ARRDC3
RRP15
ENAH
HAX1
TRDMT1
UQCC1
RPS8
COX7A2
VARS2
LOC112694756
LPAR3
FSIP2
HNRNPUL1
KIT
FAM227B
DTWD1
PALM2AKAP2
TSFM
CUL9
ZFP62
MARCHF7
PDE4C
RNF146
U2AF2
SMARCA5
PCSK5
MIOS
ADNP
MRPL17
DESI2
RABL2A
PPP1R8
SCAF11
HOMER1
CPNE4
PATL1
RNF125
HFM1
DHX8
USP53
LUC7L2
DARS1
CCNT1
FMC1-LUC7L2
FMC1
RNASEH1
SNX24
MTFR2
CLUH
NLGN3
PYROXD1
TAF3
ANXA5
CRYBG1
THEM6
PRKCE
WASF1
TADA1
CDC40
BPTF
EZH2
STK32C
MRPL48
KLF12
SHPRH
TNFAIP3
LRRC27
PNRC2
CTTNBP2
TMSB15B
KCNQ5
NADK2
DMAP1
DAGLA
TEX261
NCKAP1
PRDX1
AVPI1
SPSB2
SPRR2F
PHF21A
C1orf53
ATP5MPL
PIGC
COIL
RBKS
BABAM2
TERF2
ZNF862
COPS8
PPP6C
TUBE1
FAM229B
SQLE
FDX1
TIMM23
SYDE2
ZBTB40
ZNF3
ASMTL
MALSU1
PDCD6
CD37
TTLL12
EPB41L5
STK24
SLC16A10
KPNA5
TEX10
SAMD8
DUSP13