ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CPSF4 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◣ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DUX4
FRG2C
DRAP1
C11orf68
ZNF76
ZNF143
POLR2J3
HSPE1-MOB4
HSPE1
HSPD1
GDA
ATXN7L2
IL7R
HYAL2
DAGLA
PDXDC1
MTRNR2L1
KRT34
ARRDC4
HNRNPA2B1
CBX3
FAM53C
CDC25C
WDR74
HHIPL1
CCDC85C
NR4A1
C11orf86
NNMT
CSGALNACT1
PSMC3
SRI
SLC35E2B
SLC39A13
OR10D3
FRG2
OTULINL
SETD1A
STRBP
WASF2
TSR3
GNPTG
HARBI1
ATG13
GPR137
BAD
FOS
RPN2
MROH8
FGGY
LIPK
C5orf51
ATG101
SNX15
ZNF687
CARD16
NEK2
ALDH18A1
ERCC1
CD55
NUDT3
NR6A1
WDR70
TSC1
GFI1B
KLRC2
CUL2
TBL1X
SLC39A10
DNAJB12
BCAS1
GTF3C5
RAPGEF1
FHL2
GLIS1
DKK1
MRPL48
GKN1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FAM156B
FAM156A
TSN
GFM1
RAB22A
PTGES
UBE2B
CDKL3
CPA4
ATF3
KLF1
GCDH
DNAJC11
MARCOL
SFSWAP
CD59
BRPF1
TES
ZC3H6
RCOR3
SLC25A25
NAIF1
PSMA7
PPP1R13L
POLR1G
BIRC3
YY1AP1
DAP3
EIF2D
RHCG
LAMP1
DYNC2I2
ATR
ISY1-RAB43
ISY1
BRIX1
BIRC7
EIF3F
LOC102723996
ICOSLG
IQCH
AAGAB
CDON
TXNIP
CALM1
TSFM
COA1
RALGDS
ASB2
XPO7
DDX17
RASSF9
USP15
CETP
HAX1
SPRING1
RNFT2
GBA
IBA57
RIN1
CALM2
ATAD2
DGAT2
LRRC37A3
TSR2
LOC388282
KIFC3
METTL25
HMG20B
CCDC59
SSNA1
ANAPC2
PHKA2
NADK2
SUMF1
WDR43
PAIP1
CITED4
TXNRD1
ATF7-NPFF
ATF7
ATG16L2
CDCA7L
NDST2
CRBN
PMVK
GNAS
PDE4D
SEPTIN7
PRKCZ
STX16
MFSD12
OSMR
CYP1B1
PIK3R3
H4C14
KAT5
NAGPA
GIPR
CDIN1
TEAD1
CDK5RAP2
SPNS1
NUP155
SAMD9
NYX
NOL8
CENPP
GPRC5A
STPG3
NELFB
ZNF408
ARHGAP1
ATL2
GIT2
ANKRD13A
USP2
GYPC
WNT1
ATP6V0C
COQ7
CDIPT
TIGD5
EEF1D
TRMO
COA6
TMC5
LANCL2
MAOA
ASB6
METTL1
EEF1AKMT3
CYP27B1
RIPOR2
DISP3
S100A13
CHTOP
PER1
PPIB
KIF1C
INCA1
LMNTD1
TMEM41A
MYO9B
HAUS8
TRIP13
TMEM185B
PDK4
BRD9
H4C12
EIF3C
WDR25
WARS1
PDZK1
KRT80
POLG
RPL26
OAS1
ARL8B
FUS
AMDHD2
CYCS
TADA1
KMT2D
DPH7
BAZ2A
H4C15
PLAU
NDUFS3
KBTBD4
DNAJC9
ICE1
TCAF2
PPP5D1
LIFR
CALM3
TEKT2
ADPRS
ARFGAP2
PARK7
HES1
MTCH1
SLC33A1
C21orf91
PRKCI
ZNF219
TMEM253
FBXO4
RELA
PTP4A1
WARS2
UBE2I
POR
NUF2
PCBP2
S100A2
PDK2
FAM102A
WASHC2C
USP36
DICER1
IER3
FLOT1
ZNF341
C1orf198
AGAP11
ADIRF
S100A16
DOLPP1
BRWD1
MEF2D
SCAND1
ZNF668
ZNF646
CMSS1
STK17A
MAZ
UBB
PTDSS1
MTERF3
VPS33A
EIF4A2
ZDHHC6
VTI1A
PLEKHA8
HAGH
FKBP14
FAHD1
RBM8A
PRR5L
ASH1L
AAAS
EIF2S3
SLC25A53
TBC1D13
SPATA25
NEURL2
CTSA
KRT32
SSBP1
MMP13
CLTC
AURKAIP1
POLA1
STX1A
ARAF
ZNF335
SLC8A1
NDUFB1
CPSF2
UBC
JRK
HNF4A
DDX18
KNTC1
DOHH
ITPRIP
TMEM9
LRRC20
THEM4
ARID3B
SLC48A1
FOSB
RPS26
NTMT1
FRAT1
NR2F2
INAVA
SPATA46
C1orf226
COG2
SLC9A1
HNRNPF
ZNF131
GUK1
RBM48
PEX1
BZW2
ANKMY2
MYL12B
SLC41A3
SH3BP4
ROBO1
TRUB2
NBN
COQ4
ITGB3BP
EFCAB7
UBE3B
KCTD10
C19orf33
MBNL1
PLCXD2
P4HB
JUND
AVPI1
SURF6
ZNF212
RFX1
CHD2
FCHSD2
C1orf174
HRH1
PDE6D
COPS7B
CDK1
PIP4K2B
QSOX2
UBQLN1
TSKU
SLC35B1
CAPN2
WDTC1
INA
EIF4G2
ZFAND3
TRAM1
NARF
LRP6
RHOT2
TIMM22
CLPTM1
TSEN54
CASKIN2
ERICH4
DMAC2
CHMP7
CFAP20
CCDC97
ZC3H7A
OGA
LPIN1
MARCHF6
WDR13
GCLM
RPS14
HDAC6
TPRN
TMEM203
RPLP0
NDOR1
NME1
LRPPRC
EIF1AD
BANF1
PRDM10
CIDEC
IL24
RAD51AP1
CXorf58
C12orf4
GTF2IRD2B
GTF2IRD2
LIMS1
KIF21A
EFCAB2
TAGLN2
IFT140
CRAMP1
RPL37
HKDC1
ECT2
COX20
PLIN3
SDE2
USE1
SRPRA
KLF10
FBXO46
ETS1
RCE1
GRIPAP1
HEMK1
C3orf18
ISG20
MUC13
ARID2
TMEM222
POLR2J
MTCH2
KLHDC10
PPEF1
PDCD6
AMOTL1
ATXN1
WASHC2A
SLC6A18
MRRF
MRPL42
NIFK
KLHL15
FBXW2
SENP1
PFKM
INTS7
DTL
PPOX
ZSCAN32
ZNF174
ZER1
RNF103-CHMP3
RMND5A
CDH13
PHF19
PCCB
TRIB1
THUMPD1
SECISBP2
PYGO2
LOC101928120
PCIF1
C18orf63
UQCRC2
CENPN
SURF4
PTGER4
CEP63
ANAPC13
SLC25A45
RHOBTB2
FRMD8
PEX5
EFCAB14
UBIAD1
ANKRD36C
USP9X
CDK9
TNRC18
DTWD2
DDX46
MAPRE3
CEP295
TRIM44
SLC20A1
LY6K
C2orf49
DYNLL1
DDX41
CENPF
TMEM107
NCOA5
RAB27B
PXK
HMCES
CCDC124
MAIP1
KRTAP20-4
SUPT7L
SLC4A1AP
RRP15
AKIRIN1
CSTF1
AURKA
EIF3B
MTRR
FASTKD3
PDHA1
LMNA
ITGBL1
IFT52
EPC2
DAB2
NRM
CCL20
ZFP64
PPP4R3A
ETV6
AP3S1
CWF19L1
ZBED5
POLR1H
HEXA
TMCC1
RRNAD1
PPP1R18
KRT8
ISG20L2
TMEM132A
STAT3
PRSS27
HNRNPH1
ZFAND2A
GABARAPL1
ALG10B
MGLL
RCAN1
NUP214
INKA2
DDX20
CDC14C
AARS2
MRPS23
EED
PFDN4
SQSTM1
SIDT2
NPW
ARHGAP17
TARDBP
NR1H3
ACP2
ZCCHC4
MAP2K3
POLR3B
E2F8
CNTRL
C5
POC1A
CLPB
THAP12
SRXN1
H2AX
GVQW3
OXR1
KIF27
INTS4
CNOT6
CACTIN
AKR1B1
ATP5MC2
TRIM55
PAXIP1
NSFL1C
ZBTB26
RNPS1
NFX1
FAM133B
TPK1
MCOLN1
FZD1
HSPA8
TMEM260
USP49
SERTAD4
MRPS30
EBAG9
PMF1-BGLAP
PMF1
SRSF3
SIRT4
DYNLT3
SLC35E2A
QRICH1
BNIP1
CCDC34
SKA2
PRR11
H1-2
VIRMA
HASPIN
PPP1R37
RPL5
RBM24
INPP4B
ZFX
VDAC2
MRPL27
EME1
ARHGEF1
VPS37A
TCF3
MIA3
LSG1
CNOT7
CIZ1
PRKCSH
NOCT
MGST3
FOSL1
COPS7A
CCDC151
AP1G1
RAB5B
ATF6
SYBU
CKAP2L
CELF1
TPR
SMG7
PARVA
ODR4
PEX11B
TTC9C
HNRNPUL2
TTC33
PRPSAP1
DCLRE1B
AP4B1
MSTO1
EPYC
PIMREG
OLFM1
ETFBKMT
PRRC2B
NR1D2
NKIRAS1
LRRC8A
KYAT1
AXL
SOWAHC
SEPTIN10
SRSF4
MET
DPAGT1
CDKN1C
C2CD2L
SUPV3L1
SMYD3
NEDD4L
CLCN7
OXCT1
STK40
SSU72
SMIM12
EPB41L5
PSMB7
SPINK1
DEDD
RNF7
LGALS9B
VGLL4
TMEM170A
PMPCA
ENTR1
PHF1
ARFGEF2
WDR5
STK19
FEM1A
DXO
MTBP
MRPL13
MEAK7
GNL3L
CLUH
UXT
PSME3
PRC1
C8orf58
ZNF674
SRP9
POLD2
TUBB
TPRA1
SREK1
PLEC
MDC1
CARD14
TATDN3
PSG9
NSL1
GFOD1
PTPN6
NDUFS7
C12orf57
TBCE
NMUR2
LIN7C
CLN3
APOBR
FAM71D
CSTF3
BBS1
SRCAP
LOC730183
AMHR2
TARS2
C8orf33
BOLA3
SF3A3
ELOB
ZNF185
NVL
CCNT1
FUT11
CTSS
CTCF
GTF2H4
KLF4
PRDM11
KDM4D
DNLZ
CWC15
TMEM9B
PTPN14
DPP3
BMS1
CCDC200
CAPRIN2
TRMT61B
LRCH4
FBXO24
C1orf53
BACE2
ADK
POLE3
KCTD9
CDCA2
C9orf43
ZNF367
VPS52
TCERG1
RPS18
RBL1
FAM72D
FAM72C
ZNF620
STX18
COPS4
SLC25A3
NOC4L
MTF2
GABPB2
DDX51
PSMD5
RALY
LARP1
GOLGA1
DHX8
CREM
USP42
U2SURP
STK35
ELFN2
APOLD1
METRN
FLCN
BLM
TAMM41
SEMA3B
ZNF181
USP12
GSN
ATXN2
NDUFB3
FAM126B
VPS13C
EXD1
CMIP
CHP1
C2CD4A
TMEM267
TMEM247
RRN3
RIMBP3C
RIMBP3B
C19orf48
SRD5A1
PRRC2A
POLE4
NUP160
NSUN2
FRMD3
CCT5
BCO2
ATPSCKMT
AIF1
ENSA
TTLL6
FAM25G
FAM25C
YIF1B
RWDD1
KCNK6
GPATCH3
FAM76A
ASH2L
XXYLT1
RNASEK
C17orf49
SUB1
PLAAT2
PGAP2
LIMA1
RXRA
RPS20
PTGES2
PDE4DIP
HMGCS1
PUS10
PEX13
KCTD5
GALNT10
PRMT3
PPWD1
PPP2R5A
PIH1D2
NKAPD1
MRPL21
IGHMBP2
CENPK
UBE2C
IARS1
DCXR
NEDD4
GIPC1
UBE3C
PPP2R3A
SMC3
PTCD3
POLR1A
ZNFX1
UPP1
TOM1L2
PFKP
NRAS
MTUS1
KRT17
KAT8
DRC3
MAPK8
USF1
NIBAN2
MTMR12
FAM149B1
ECD
CBLC
TACC1
PINX1
MARCHF8
HSP90AA1
CPLANE1
ACOT7
PI3
COL16A1
TIMM10
RRP1
RAPGEF3
ACOT9
YTHDF2
TIMM23
CABLES2
TTI1
TMEM95
RPRD1B
MRPS2
KCTD11
CIPC
C9orf116
HPS5
GTF2H1
UQCRH
SYNC
LRRC41
MBTPS2
INPP5E
HSPA9
ARMH3
SNX19
SLC36A4
NDUFAB1
CDKN1B
CDKN1A
WNT9A
SNAPC5
SAP30BP
RECQL5
PSMD4
TMEM199
SMPD1
POLDIP2
RBBP5
PLD1
NDUFS6
NCBP3
MRPL36
OAZ3
NPIPB8
LRATD2
RUNX1
NSUN4
DPY19L4
ATP8A1
ANKRD2
SF3B6
FAM228B
SNAI1
SCAF11
MRM3
GLOD4
DGKZ
COA8
BAG5
WDR53
FBXO45
CEP126
ANGPTL5
ALDOA
TUBB4B
SRRM2
HLCS
CENPS-CORT
CENPS
SMC1A
SIVA1
RUVBL1
RIBC1
PER3
TOR2A
SMAD3
SCRIB
ZNF622
TAF4
ASCC1
ANAPC16
CCDC78
ANTKMT
SLC25A29
PHAX
NUDCD3
DDX5
CEP95
CDIP1
VPS50
USP11
SLC25A10
RETREG1