ChIP-Atlas: Target genes

Potential target genes for RFX1

Query protein: RFX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424431 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX1's Target genes

◢ RFX1: Average

◢ SRX5457513: Hep G2

◢ SRX5457514: Hep G2

◢ SRX2424672: K-562

◢ SRX2424673: K-562

◢ SRX2424777: K-562

◢ SRX2424778: K-562

◢ SRX2423398: MCF-7

◢ SRX2423399: MCF-7

◣ SRX2424431: MCF-7

◢ SRX2424432: MCF-7

◢ RFX1: STRING

RPS5
PES1
CHURC1-FNTB
CHURC1
TNNI3
DNAAF3
TCTN3
ZBBX
PTPN13
PROSER3
LIN37
HSPB6
SPATA2L
TTC7A
MCFD2
RFC5
SIPA1L1
AP1S1
NAA40
CFAP251
CD209
ZBTB46
QTRT2
CCDC191
CFAP36
RPL35A
IQCG
LMLN
SF1
DYRK1B
CFAP91
SLC51B
NAP1L1
TPM3
ANGEL1
ZNF473
VRK3
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
CDK20
PBX3
ZNF584
RNF225
SETD1A
ORAI3
MAPRE2
FAM187A
EFTUD2
CCDC103
OVCA2
CRNKL1
CFAP61
CACUL1
SPTBN2
MBD4
IFT122
WFDC3
DNTTIP1
COPS3
THNSL1
ZNF324B
SDCBP2
TMEM9
ZNF579
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
LOC112694756
DSTN
BFSP1
C11orf49
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
TSPAN19
LRRIQ1
NYAP1
DNAJC16
CASP9
HMGCS1
HSP90B1
KLHL18
KIF9
PELI1
SPATA17
GPATCH2
TTC30B
PUM1
MORN3
TM9SF1
IPO4
ZC3H10
RPL41
ESYT1
MAPRE3
PRR3
GNL1
TOP1MT
RHPN1
MEAK7
TTC23L
UVRAG
MCM7
AP4M1
TP53BP1
MAP1A
ZNF594
ACAP2
UBXN2B
IFT22
TREX1
SHISA5
IQUB
ZNF184
RRP12
HSPH1
RNF139
PDCD6
DYRK3
ZMYND12
PPCS
CCDC30
PI4K2A
MORN4
GTF3C4
DDX31
C7orf50
NRSN2
FXYD7
FXYD5
FXYD1
LGI4
PCF11
PTMS
LAG3
POLRMT
FGF22
TTLL9
DUSP15
ZNF287
CALR3
C19orf44
ENDOV
PRKCSH
CCDC151
PIK3R2
TPCN1
IQCD
C2orf73
ZNF497
A1BG
OTUB1
MOB3A
IZUMO4
ZSWIM1
SPATA25
CTSA
NEURL2
IQCH
AAGAB
FZR1
DOHH
CYTH2
TMEM67
CCDC34
SRFBP1
JUNB
POLL
DPCD
SYS1
NME9
YIF1A
TMEM151A
DMWD
RILP
NDRG4
ZBTB48
CFAP73
CCPG1
C15orf65
MFSD4B
IPO11
DIMT1
DYNC2I2
SSBP2
MOK
WIPF2
FAM183A
THAP10
LRRC49
PITPNM1
BCL2L1
CFAP54
FUT7
C9orf139
ABCA2
DHX40
STK11IP
TOR2A
PTH2
GFY
DAAM1
RTF2
CCDC74A
STUB1
RHBDL1
JMJD8
WDR24
CCDC184
MIB2
NCOA5
LINS1
ASB7
EFHC1
PTPN1
SNRPF
SCRN2
OSBPL7
LRRC46
ZSCAN5A
TMEM53
ARMH1
CSNK1G1
KAAG1
DCDC2
SLC37A1
RSPH1
LENG1
DUSP1
DYRK1A
PPP2R1A
HSPBP1
BRSK1
ZC3H3
FOXN2
LRP4
MOCS3
DPM1
CRIP2
TSNAXIP1
RANBP10
TRAPPC9
NQO2
PARS2
CEP112
SLC35A2
PIM2
MRPS21
C11orf94
VAT1
RND2
ZNF574
GRIK5
PGP
E4F1
RNF32
MYADM
PRKCG
CTU1
TARBP2
MAP3K12
TEDC1
CRIP1
EPHX3
TSPAN31
MARCHF9
CDK4
PRKAR1A
CYP46A1
RFX1
MAFK
PRDM4
SPATA2
ITGB3BP
EFCAB7
NEK10
HSPA12A
ENO4
UAP1L1
MAN1B1
ZFHX2
THTPA
HIC1
EFNB3
MVK
THG1L
DYNLRB2
POFUT2
MUC1
MINK1
ABHD11
LRRC56
HRAS
RSPH14
RAB36
KRT8
MAPK10
FLT3LG
DNAH7
ARRDC4
SH3GLB2
MIGA2
FAM214A
TRMT5
SLC38A6
PRR29
ICAM2
STK32C
LRRC27
GRIN1
CIPC
TTC30A
XPR1
YWHAQ
PPP1R21
PICK1
DNAAF2
CHCHD3
CENPH
NUDT2
KIF24
TSEN34
TMC4
MBOAT7
SMG7
SAXO2
EFL1
CCDC8
ARMC3
HOOK2
EFCAB12
ZNF862
DNAH6
TSEN2
CAMK2N1
FHAD1
RNF5
AGPAT1
AGER
U2AF2
CCDC106
TMX2
MED19
HMG20B
RFC2
COPB2
WDR13
CEP41
FLNA
TMEM107
WDR54
C2orf81
MAP1LC3A
INTS8
POMT2
GSTZ1
GOLGB1
TAF6L
POLR2G
BRCA1
MLEC
ZNF623
DLG4
ACADVL
SEMA4B
TXNDC17
KIAA0753
SLC4A8
NXNL2
NUMA1
LRTOMT
BAIAP3
RBBP6
DAD1
ABHD4
MSMO1
SHOC2
BBIP1
CCDC175
CFAP58
NR2F2
RASL10A
GAS2L1
GPR107
XRCC1
PINLYP
RUNDC1
PTGES3L-AARSD1
PTGES3L
SLC25A25
CHD4
CPLANE2
AKAP11
PROS1
ARL13B
AHI1
LOC728392
TEKT1
G3BP1
PANK2
PODNL1
DCAF15
TOB1
METTL15
KIF18A
PDE4A
TSPYL4
DSE
RALB
RNF40
CCDC189
SYVN1
ELMOD2
TMF1
WDR73
NMB
MAFA
ARMC2
PPM1E
TCTN1
FAAP24
CEP89
STX8
CFAP52
PHTF1
HMGCR
EBNA1BP2
CFAP57
RHOD
ALKBH5
LGI1
OPRL1
LKAAEAR1
HSPA1B
PRMT5
TOM1L2
DRC3
PAK4
COG7
OSCP1
ZNF768
ZNF747
SIX3
GTF2IRD2B
GTF2IRD2
E2F3
MRPS2
C9orf116
CLBA1
AHNAK2
KIF23
TRIT1
C2orf50
POLR3H
H1-10
YIPF3
POLR1C
LRRC73
QTRT1
TBCEL-TECTA
TBCEL
KLHDC10
POLD4
RUFY1
USP30
DYNC2I1
CATIP
RNF39
PPP1R11
POLR1H
ERICH6
IQCC
DCDC2B
CCDC28B
FOXJ1
TH
INS-IGF2
INS
UBL5
PIN1
NSD3
LETM2
TRIM36
ACTR6
SPATA13
C16orf46
RIN1
BRMS1
C3orf49
ARL6
BCLAF1
DBN1
PRR7
TMEM91
B9D2
TGFB1
CCDC74B
B9D1
STOML2
PIGO
FAM214B
P4HA1
ATG9B
ABCB8
CACYBP
DYNC2LI1
L3MBTL2
PPP1R37
C1orf159
LPIN2
SPAG8
HINT2
YWHAE
FAM185A
MZF1
TUBB3
MC1R
UBXN6
MED9
JUN
SFXN2
ARL3
ARFGAP1
LUC7L
FAM234A
ZNF628
SSC5D
NAT14
WDR93
PEX11A
ARID4A
CCDC130
LRRC6
PPP1R12B
UBE2T
KATNAL2
TNPO1
FSIP1
ECE2
DCP1B
TMX4
RSPH4A
IFT172
GCKR
FNDC4
MED25
FUZ
WEE1
LCA5
SPOP
CIB4
NACAD
ELAPOR1
C1orf194
NDUFA8
MORN5
NUCB2
CHN1
PFDN5
MYG1
RFX3
CCDC33
FAM204A
SPEF2
CFAP43
GET3
RNF223
SPICE1
OXNAD1
DPH3
BDP1
YWHAZ
KIFBP
WDR35
NEMP1
FOXN3
CCDC39
TMEM88
NAA38
CYB5D1
PCNX4
TEX264
KIF6
GNB2
CFAP45
HYDIN
BBS1
CFAP126
JPH4
AP1G2
FBXL13
ARMC10
RPS27A
CLHC1
IFT57
SLC27A1
NXNL1
FAM227B
DTWD1
PEF1
TPGS1
NDUFA5
C17orf97
KIF3B
TRIQK
RPP38
ACBD7
COQ7
CBX8
TXNL4B
DHX38
UBE2O
AANAT
NDUFS3
KBTBD4
FAM180B
TRIM41
RPL36
MICOS13
HSD11B1L
ERICH2
PREPL
CAMKMT
TMEM231
GABARAPL2
DYNC2H1
CCS
CCDC87
DNAJC1
SREK1
PGD
KMT5C
STRN4
FKRP
GTSF1L
ITSN1
CRYZL1
ID1
TASP1
ZKSCAN1
C8orf33
PIFO
TPPP3
HMGN2
MIER1
DNAI4
UBXN11
DNAH2
USP54
EFHD2
RALGAPA1
NQO1
CACNA1G
SWSAP1
C4orf48
C16orf71
ANKS3
CEP152
ZFYVE28
CFAP99
KATNIP
GTF3C1
RPL30
POLR3GL
LIX1L
ANKRD34A
TTF1
CFAP77
BSG
STXBP4
COX11
L3HYPDH
JKAMP
LMAN2L
DNAJA1
APTX
HSDL1
DNAAF1
TRAK1
NIM1K
TAF6
MBLAC1
CNPY4
TLX2
PCGF1
LBX2
SF3B5
WWOX
SPEF1
CENPB
CDC25B
PRKN
PACRG
IQCE
GNG3
BSCL2
FER
MAP9
TOR3A
YOD1
PFKFB2
MLF1
RASA3
IRX2
C5orf38
WDPCP
MDH1
ADGRA1
AJM1
UBL3
HEATR6
TIGD4
ARFIP1
TENT5C
AXDND1
HNRNPF
RUFY2
EIF2S1
ATP6V1D
SLC25A3
SYT12
TRMT12
MICOS10-NBL1
MICOS10
B4GAT1
SFR1
CELF6
MARK3
CAND1
SDE2
SYBU
FANK1
CLUAP1
C16orf90
RTN4RL1
DPH1
ZNF771
ZNF48
WARS2
NPHP1
MTLN
PNP
PIP4P1
MAF1
CYC1
SLC25A46
HPCAL4
TULP3
DUSP6
EFCAB10
AP1M1
CARS1
IDS
CFAP20DC
SNIP1
DNALI1
IFT140
CRAMP1
PPP1R32
CCDC146
SLC7A6
RPF2
HIGD2B
BBS4
VTA1
NMBR
ABHD2
PSMA5
SMC1A
RIBC1
YIPF6
INTU
SPATA33
SMARCAD1
LMBRD1
SPG21
CEP135
GNL2
METRN
FBXL16
PRORP
PPP2R3C
KNTC1
ACOX3
RAB11FIP2
HSFX3
EOLA1
RASGEF1B
KNOP1
BTBD3
TSGA10
C2orf15
PLEKHG5
PHC1
TMED8
SAMD15
CYB561
RPP30
HTR7
ZNF446
ZNF324
BTRC
DNAAF4
AGPAT5
ATP23
ALLC
FAM151B
KCNH3
ZNHIT1
PLOD3
MNS1
UBN2
PLEC
RXRA
SHQ1
SMIM5
RTL5
GLRX5
TBC1D16
CCDC40
ALS2
FAM161B
COQ6
PATZ1
ASS1
ITGAD
DYNLL1
LMTK3
RPN1
TNXB
TRIM2
TADA2B
CCDC96
EDEM3
ZNF76
SRSF7
CSNK1G2
TTLL5
ERG28
ARF3
HPCAL1
POLD3
SUN3
C7orf57
HNRNPH2
GLA
REM2
ATP1A3
HS1BP3
SPAG9
DHRS12
LRGUK
TAOK2
ZNHIT2
TM7SF2
MRPL49
FAU
DUSP3
CFAP97D1
PLEKHG1
FBXW7
ERCC1
KCNK4
GPR137
BAD
NUDCD1
GPR68
SRF
CUL9
ARL4A
IRAK1BP1
MYCBP
GJA9
FAXDC2
CNOT8
GOLGA6L4
DUSP18
KNCN
ETFRF1
CFAP94
EHD1
TECR
DNAJB1
IFT81
GEMIN8
WBP1
MOGS
INO80B
FOXO6
RAB6B
FANCI
EIF3L
ANKRD54
IQANK1
FAM83H
MSH5
DDAH2
CLIC1
PSD
FBXL15
RGS3
KCNK15
ZBTB40
CLCN3
LIM2
C19orf84
SH2D3C
CDK9
SH3BGR
LCA5L
METTL2A
DNAAF6
OTUD5
RAD23B
THBS3
MTX1
CALB2
SRSF1
EIF2S2
TUBE1
FAM229B
SPATA46
C1orf226
MEAF6
CFAP298-TCP10L
CFAP298
KIF14
PKP4
CCDC148
SWI5
GOLGA2
ZNF627
AP2S1
IP6K1
PSMB5
PSMB11
SPATA4
FAM227A
CBY1
PLA2G2A
NECTIN4
KLHDC9
NBR1
RALGDS
TOGARAM1
KLHL28
SYT5
PPP1R42
STX12
MPP7
MARCHF10
BBS12
MAP3K14
TMED10
FOXK2
C8orf37
CELF3
TCTEX1D4
PLK3
BTBD19
TRAF4
KDM6B
FAM110A
LRPAP1
CFAP47
TTC16
PTRH1
CFAP157
RAVER1
ICAM3
H2AP
LTBP4
TUBAL3
NET1
BRD2
TBC1D32
KANSL3
FER1L5
TTC8
CCNL1
AGTRAP
TRUB2
COQ4
STPG1
NIPAL3
TCTN2
THOP1
SGTA
BBS9
SPCS1
GLT8D1
ZNF444
ZP1
SLC25A14
CATSPERG