ChIP-Atlas: Target genes

Potential target genes for RFX3

Query protein: RFX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RFX3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX3's Target genes

◣ RFX3: Average

◢ SRX2636179: Hep G2

◢ SRX2636180: Hep G2

◢ SRX23177031: PLC/PRF/5

◢ SRX23177032: PLC/PRF/5

◢ RFX3: STRING

MTRNR2L1
C1orf159
TMEM9
ZBBX
NPAS4
CFAP54
MAMDC2
NDRG4
LRRC6
ZNF497
A1BG
CHURC1-FNTB
CHURC1
NEK10
YIF1A
TMEM151A
PRR29
ICAM2
ZBTB46
TTC23L
POLD3
WFDC3
DNTTIP1
FOXJ1
MAPRE2
DYNC2LI1
KLHL18
KIF9
SDCBP2
PITPNM1
TTLL9
DUSP15
POLL
DPCD
PDE4A
CFAP36
RUNDC1
PTGES3L-AARSD1
PTGES3L
C11orf49
CEP41
ACOX3
BTBD3
HSDL1
DNAAF1
SNRPF
LRGUK
KIF3B
MFSD4B
UBL5
PIN1
FKBPL
ATF6B
POLRMT
FGF22
NPHP1
MTLN
ZSWIM1
SPATA25
DAD1
CTSA
AHI1
ABHD4
BRCA1
LOC112694756
RAB11FIP2
TNNI3
DNAAF3
TEKT1
IQCH
AAGAB
TM9SF1
IPO4
TOR2A
SPATA2L
MTRNR2L2
MSH3
DHFR
DYNC2I1
PES1
DUX4
FZR1
DOHH
EBNA1BP2
CFAP57
BBS1
CARS1
ZNF584
RNF225
RHOD
ACTR6
MRPS2
C9orf116
INTU
EFHC1
PMVK
DYNLRB2
QTRT1
NME9
DNAH7
CSNK1G2
SPEF1
CENPB
CDC25B
AGTRAP
TTLL1
CEP112
CCDC113
CCDC34
PSMC3IP
TRIT1
OVCA2
PRKCG
USP30
CAMK2N1
FANK1
TTF1
CFAP77
CTU1
ZFHX2
THTPA
C7orf50
DCP1B
EPHX3
RFC5
MEAK7
CCDC8
PRKN
PACRG
QTRT2
CCDC191
C16orf46
AP1S1
ADGB
SYS1
WDR93
PEX11A
PI4K2A
MORN4
STK32C
LRRC27
ACACB
LMBRD1
SHQ1
FAM110A
LRPAP1
ARFGAP1
UBXN6
ZNF84
CFAP69
UBXN11
WDR35
RSPH14
RAB36
JAM3
NRSN2
ABI2
MUC1
GNG14
FBXW9
HSP90B1
AZIN2
S100B
LENG1
DYNC2H1
ANGEL1
LARGE1
GRIN1
TSNAXIP1
RANBP10
DYNLL1
UBE2O
AANAT
CSNK1G1
ABAT
DAGLA
CRB2
SCRN2
OSBPL7
LRRC46
CCDC39
POR
ARL6
SPAG8
HINT2
THNSL1
AGPAT5
TTC30A
TXNDC17
KIAA0753
BDP1
RALB
HSPH1
CFAP43
PFDN5
MYG1
SIK3
XKR7
EFCAB12
MOCS3
DPM1
NCOA5
RPL35A
LMLN
IQCG
KIF23
ARMC3
SLF1
KIAA0825
SLC37A1
RSPH1
RPP38
ACBD7
FAM204A
SPAG16
KRT8
PREPL
CAMKMT
POMT2
GSTZ1
PPP1R21
SPEF2
TBCEL-TECTA
TBCEL
PIFO
DMWD
PCOTH
MIPEP
C1QTNF9B
KATNIP
GTF3C1
TRIP12
FBXO36
C11orf94
PGP
E4F1
OTUB1
ZNF446
ZNF324
DNAJC1
C2orf73
NUCB2
NR2F2
RNF141
GTF2E2
INSM2
HMG20B
SPTBN2
COG7
B9D1
STOML2
PIGO
FAM214B
PROSER3
LIN37
HSPB6
ENDOV
STK11IP
ZNF324B
WDR54
C2orf81
NUDT2
KIF24
TP53BP1
MIB2
NR1D1
YIPF3
POLR1C
MAP1A
LRRC73
ELMOD2
CHN1
SERINC3
PKIG
SF3A1
CCDC157
MAFA
CRNKL1
CFAP61
CALR3
C19orf44
KIAA1841
FAM24A
TRAPPC9
GPR137
TSPYL4
DSE
DNAJC16
CASP9
DUSP3
CFAP97D1
RNF40
MORN2
DHX57
CCDC189
PATZ1
CATIP
YWHAQ
PRKAR1A
TOM1L2
DRC3
SORBS2
PTPN1
FAAP24
CEP89
IQSEC3
CHCHD3
RALGAPA1
PER2
C17orf97
WDR31
BSPRY
ALLC
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
SF1
TMX4
SRFBP1
SIPA1L1
DNAH2
CCDC130
TTC30B
VAT1
RND2
ETFRF1
CFAP94
ZFP90
TMF1
MOK
MBD4
IFT122
RFC2
PHC1
ZMYND12
PPCS
CCDC30
TOP1MT
RHPN1
LIN28A
TADA2B
CCDC96
CYTH2
TMEM231
GABARAPL2
SMG7
IFT81
LRRC56
HRAS
L3MBTL2
IQANK1
FAM83H
CACUL1
TMEM107
PACRGL
KIF6
SYT5
ZNF473
VRK3
TASP1
FBXL13
ARMC10
DYRK1A
PRKAR1B
SEMA4B
KLHL38
RFX1
CFAP126
ZC3H10
RPL41
MYADM
ESYT1
ARL4A
DRC7
RNF139
ENTPD5
BBOF1
FSIP1
TSEN2
TMEM53
ARMH1
H1-10
MIER1
DNAI4
ING2
PRMT5
YWHAE
CFAP53
DNAAF4
IQCC
DCDC2B
CCDC28B
JUNB
NDUFA5
SPATA2
ZCCHC3
C20orf96
ID1
DNAJB13
TBC1D19
DYNC2I2
TMEM211
PRKCSH
NECTIN4
KLHDC9
CCDC151
DLG4
ACADVL
ELP1
ABITRAM
TRIM36
GSG1
GTF3C4
DDX31
SPATA4
CFAP58
NAA40
PALM3
KCNH7
ANO3
PHOSPHO2-KLHL23
PHOSPHO2
METRN
FBXL16
CCDC173
KNOP1
U2AF2
NYAP1
CCDC106
THOP1
SGTA
CFAP46
WHRN
RFX3
POFUT2
IFT22
ZNF184
ODF3L1
BTRC
DNAJA1
APTX
RPS27A
CLHC1
TTC26
FAM183A
OSCP1
CEP152
STK19
SPICE1
LOC110384692
DXO
CEP162
C4B_2
C4B
C4A
SLC25A14
LOC728392
CPLANE2
USP54
PCSK1N
ERAS
NQO2
RPGRIP1L
PAK4
FTO
C20orf27
HMGN2
TLX2
PCGF1
LBX2
IFT172
GCKR
FNDC4
NDUFS3
KBTBD4
FAM180B
TSGA10
FBXW7
C2orf15
ARHGDIB
RTF2
MKS1
WDR73
NMB
NUMA1
LRTOMT
FOXN2
EFCAB10
SPATA13
ALS2
PRDM4
ITSN1
CRYZL1
SAXO2
EFL1
SFXN2
ARL3
LOC101928764
GTF2IRD2B
GTF2IRD2
POLI
CCDC65
FAM131C
ARRDC4
FAM214A
MARCHF8
TBC1D32
METTL15
KIF18A
BBS5
SETD1A
ORAI3
UBN2
KMT5C
NME7
BLZF1
RNF39
PPP1R11
POLR1H
TRAF3IP1
DYRK3
TPGS1
TFIP11
SPAG9
RPN1
ZNF768
ZNF747
ERF
HMGCR
PJA2
MAP3K14
TMEM67
REEP6
PCSK4
VTA1
UVRAG
NMBR
LINS1
ASB7
ID2
PODNL1
DCAF15
FAM187A
EFTUD2
CCDC103
ACAP2
CLUAP1
C16orf90
PICK1
PCNX4
IFT140
CRAMP1
ODF2
RHBDD2
NEK2
FANCI
WDR90
MRPS21
MCRIP2
PPP2R1A
TNPO1
YWHAZ
MORN3
CXADR
SLC25A27
KCNK4
CYP39A1
BAD
GAS8
DBNDD1
TMED8
SAMD15
PUM1
C11orf97
ZNHIT1
TCTN3
PLOD3
BCL2L1
NKX1-1
PIH1D2
PARD6A
NKAPD1
C16orf86
ACD
CCDC175
INTS8
AHNAK
ZNF579
MZF1
C16orf71
ANKS3
IQCE
IFT57
PSMB3
PCGF2
THAP10
LRRC49
AXDND1
SLC25A3
MTRNR2L8
HSPBP1
BRSK1
TBC1D16
CCDC40
TULP3
MNS1
ZFYVE28
SLCO2B1
CFAP99
ZNF24
SPG21
MCM7
AP4M1
ZC3H18
MLEC
SPACA9
LPIN2
AK8
SIK1B
SIK1
PIK3R2
DUSP1
KLF16
TUBAL3
NET1
SUN3
C7orf57
TDRP
COQ7
TMEM234
EIF3I
TRAPPC2L
GALNS
EHD1
MSMO1
GNAT2
AMPD2
TSPAN31
RER1
MORN1
MARCHF9
CDK4
NEURL2
MUL1
TENT5C
PRR7
DBN1
PPP1R16A
FOXH1
RPS5
SPCS1
RABL2B
GLT8D1
NEK11
ASTE1
FOXN3
PARS2
LOC390877
CCDC146
TSPO
MCAT
TIGD4
ARFIP1
CATSPERG
EIF2S2
FAM151B
RRP12
MAP1LC3A
CDC37
PBX3
FAM86B2
TEX9
ABHD11
CFAP298-TCP10L
CFAP298
COPS3
VPS53
FAM86B1
DAAM1
PANK2
CCDC57
LRRC23
ZEB1
DUSP18
SPATA24
PROB1
E2F3
RNF5
AGPAT1
AGER
GLRX5
TEDC1
CRIP2
CRIP1
PKP4
CCDC148
MAF1
CYC1
PEF1
RBKS
BABAM2
ALMS1
HIGD2B
BBS4
LTV1
ZNF775
UBXN2B
WDR1
PELI1
CFAP20
CEP295NL
MAPRE3
BAIAP2
ERICH6
TCTN2
PGD
SETD4
CBR1
MSH5
DDAH2
CLIC1
SSBP4
ZNF628
ZIM2
SSC5D
PEG3
NAT14
CENPH
FAM185A
CCPG1
C15orf65
PPP1R42
SRSF7
CEP135
MYCBP
GJA9
CALML4
NAA20
KIAA0319
CRYAA2
CRYAA
ATP23
LOC388282
KIFC3
RUFY2
ITGB3BP
HTR5A
EFCAB7
DNAAF2
CCDC74A
THBS3
MTX1
SDE2
ERCC1
SREK1
RPL36
MICOS13
HSD11B1L
MX2
MFRP
GTF2F1
C1QTNF5
ZNF664-RFLNA
ZNF664
DZIP1
CCDC92
CEP126
ANGPTL5
TECPR2
CINP
LMAN2L
ZNF165
OR1F12
KDELR3
KCNJ4
DNAJC10
RIN1
BRMS1
RASL10A
GOLGB1
GAS2L1
EIF2S1
ATP6V1D
FOXO6
FAM174A
SMARCAD1
WWOX
FBF1
DUSP6
BAIAP3
PLAA
IFT74
E2F8
BRD3OS
ZNF862
NQO1
PLEKHB1
CEP164
SPATA17
GPATCH2
TRMT12
PRR3
GNL1
TUBE1
FAM229B
HSPA12A
ENO4
FAM227B
DTWD1
COPB2
MICOS10-NBL1
MICOS10
FRG2C
TUBA4B
TUBA4A
STK16
GLB1L
DENND2B
TRUB2
COQ4
MARK3
TMEM91
B9D2
STK36
RNF25
MID1IP1
ESRRA
CATSPERZ
TNRC6A
CHERP
TSPAN19
LRRIQ1
OSBPL2
C3orf49
POLR3F
FAM120B
DZANK1
ROPN1L
PLIN5
LRG1
NAP1L1
ARF3
POLD2
CELSR3
UBL3
JUND
IQCN
FLACC1
WDR74
STX5
SHOC2
DNAJC24
DCDC1
BBIP1
B4GAT1
KIAA1522
TIMM21
SLC35A2
PIM2
LYRM4
FBXO15
FARS2
INKA2
DSTN
BFSP1
TMEM88
NAA38
CYB5D1
BBS12
EPN1
POLR3H
COL23A1
RUFY1
DNAL1
TOR3A
CYSTM1
CCDC74B
AJM1
HM13
PYGO2
PBXIP1
LOC101928120
ZMAT2
HARS2
HARS1
HSBP1
ERI3
RNF223
DNAH12
FAM47E-STBD1
FAM47E
TCTN1
C2orf50
ZDHHC1
CYP46A1
NAGPA
ING1
CARS2
HNF4A
SPAG1
POLR2K
SPATA6
RABL2A
TPST1
TEX264
PLCH1
UFSP2
SLC25A46
C4orf47
BSG
ZNF76
DNAJC25-GNG10
DNAJC25
DNAH6
FAXDC2
CNOT8
RAB3GAP1
PPP2R5E
FER
SERTAD3
LOC102724770
DGCR6
TRIM39-RPP21
TRIM39
C12orf43
GNG3
BSCL2
PDCD6
ENTPD7
CFAP299
TOGARAM1
KLHL28
PROS1
ARL13B
MTF1
TTC16
PTRH1
GLRA1
CFAP157
MEAF6
IRAK1BP1
GNL2
SFI1
EIF4ENIF1
C4orf48
GEMIN8
PLCD3
ACBD4
XPR1
ICA1L
GDE1
CCP110
NEMP1
GPN1
CCDC121
NBR1
SYVN1
DNAL4
MDH1B
FASTKD2
SPATA7
HYDIN
REPIN1
MFSD6
TARBP2
P4HA1
MAP3K12
EMC3
TMEM232
SLC27A1
NXNL1
DHX40
SPATA33
ARL2BP
PLA2G2A
SF3B5
NACAD
FHAD1
TPM3
WDR19
NDUFAF3
DALRD3
ZASP
SAP25
CENPS-CORT
CENPS
CCNB1
ZNF214
NLRP14
WIPF2
TAGLN2
CCDC188
TTC7A
MCFD2
SYNGR3
NOXO1
GFER
GLIPR1L1
CAPS2