ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424762 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◢ SRX11668227: K-562

◢ SRX11668228: K-562

◢ SRX186627: K-562

◢ SRX20731966: K-562

◢ SRX20731967: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ SRX3322072: K-562

◢ SRX3322073: K-562

◣ SRX2424762: MCF-7

◢ SRX2424763: MCF-7

◢ CUX1: STRING

MEIS1
PPP2R1A
ABR
NANOG
TSHB
BNIP2
COX16
TUBD1
RPS6KB1
PLCD3
ACBD4
EIF2AK2
SYCP2
PPP1R3D
FAM217B
MBTPS1
DUX4
RGCC
BCAS1
FRG2C
FAM9A
SLC25A25
NAIF1
KHDRBS3
SIRT4
CUX1
FAM102B
PCDHB3
PCDHB2
KDM8
VBP1
KIAA1217
PHACTR3
WDR74
STX5
ESR1
SNRPD2
QPCTL
SLC30A1
PARD6B
NUDT15
LAPTM4B
DHX40
MBD3L1
SALL4
VCP
FANCG
RPS29
IGFBP2
FNBP4
ATMIN
TMEM214
PNPO
PPP6R3
HCLS1
FAM240C
PAQR5
CLK3
COG3
RPS11
RPL13A
AASS
CYP24A1
WDR12
CARF
WEE2
DENND11
CNPY1
SNRNP35
VPS16
PCED1A
CYP3A7-CYP3A51P
CYP3A7
MTMR3
CTBP1
RDH12
RDH11
SEC22B
STK3
H3C3
H1-2
SULF2
ZFHX2
THTPA
IRF2BP2
ITGA4
LOC102724770
DGCR6
EZH2
PRKAB1
TMEM161A
SLC25A35
RANGRF
WIPI1
PDE6A
TSEN54
LLGL2
CASKIN2
NXNL2
FBXL18
KPNA6
PPP1R12B
GSTA4
GMDS
CSTF1
AURKA
PMEPA1
TMEM107
ARL4D
DHX37
BRI3BP
SNRNP70
SPAST
HOMER2
ZGRF1
LARP7
ERICH6B
KRT19
OR8G2P
CNTRL
C5
SEMA4D
KALRN
RIF1
ZNF77
UBE2D2
DIRAS1
ART1
CD36
PTPRH
MYLK4
WRNIP1
ZHX2
GPD1L
PSG2
PALLD
GLDN
POGZ
ACP6
GSTP1
EMP3
GTF2F2
MGAT3
MIEF1
CDK3
FRG2
PARP11
LY6G6F-LY6G6D
LY6G6F
ABHD16A
AHCYL2
MTRNR2L1
TLE3
BCAS4
NEDD9
NHSL1
MAP3K7CL
CCT8
SLC25A24
STOML2
PIGO
OR1I1
RGMB
OR4F6
OR4F15
ABL1
CD55
FREM2
GRAMD1A
DLG5
EXOSC5
BCKDHA
MAF
CCDC200
RAB11B
RAP1GAP
HEXIM2
PREP
SCCPDH
KYAT1
MLLT3
EIF4E
OS9
LOC389199
AFAP1
SEMA3E
RNF19A
NPR1
ILF2
ITPKC
COQ8B
SLC6A3
MRPS23
BORCS6
NEMF
BCL11B
ZNF285
RPS3
SNRPG
FAM136A
FBXW8
RPN2
MROH8
DNAJC1
NTMT1
C9orf50
SRI
RBAK-RBAKDN
RBAK
LIMK2
PHLDA3
TBP
PSMB1
AKAP1
PFDN4
IGSF5
CRADD
COL23A1
TMED1
TMEM237
SUSD6
CAMTA1
CDK1
GUK1
TENM1
NOTCH2NLC
NOTCH2
MAMDC2
ONECUT1
UBA5
ACAD11
PRR25
GNG13
DEDD
PIH1D1
ALDH16A1
BRIP1
PLA2G3
INPP5J
YY1
TM4SF19
ZMYND8
ZFHX4
TESK2
MMACHC
TMEM131
DHRS4
MRPL48
INTS8
RAP1A
TRIM55
TMEM161B
CPVL
CHN2
FTCDNL1
FKBP1A
TEX2
STX16
LSG1
TRIM37
KRTAP5-11
ATP6V0D2
CHST12
CELF2
B3GNT3
SLC35A3
ZNF570
ZNF569
OSER1
PDF
NIP7
COG8
OR4D2
ADARB1
SND1
PRPF38B
SLC7A8
KCNJ15
RNF212B
EXOSC2
PSMD6
PSKH2
ADCY3
RNF222
ZNF704
TMEM205
RAB3D
CCDC159
TJP3
PIP5K1C
SAXO2
EFL1
NECTIN4
KLHDC9
HNRNPA3
BMP7
MCTS1
NIPSNAP1
LDLR
MVD
BCAS3
SNW1
NT5C2
FNIP2
NEPRO
SYNPR
TBX2
PRR13
NCOA3
ABCC5
ARPIN-AP3S2
ARPIN
PDE4DIP
MYO6
MAST2
SLC38A1
MTFR1
UBE3D
DOP1A
CA6
BASP1
RGPD1
ASIC5
CD14
TMCO6
NDUFA2
IK
ACTL6B
DYNC2I1
KLHDC8A
UBE2V1
COPB2
RNFT1
STRIP2
MIOS
BFSP1
SMIM6
PRKAR1A
TMF1
MAP3K3
CXCL9
ART3
CRLF2
BZW2
VAMP1
SKA2
PRR11
RHOB
SPINK1
MTO1
CGAS
C17orf58
ANKRD33
IL23R
WBP1
INO80B
CAND1
IMMP2L
ARSD
SLC48A1
RAPGEF3
TMEM141
CCDC183
RBBP5
ABHD2
ZFYVE26
RAD51B
SLC26A7
CXXC5
TAF4
TET3
FAM160B1
PFN2
ZNF700
ZC3H3
CTNNBL1
CUX2
GREB1
HDGFL3
KIFC1
SHMT2
PSMC6
RPS6KA5
DGLUCY
TTI2
LBR
SPTSSB
USP32
METTL21A
AHCY
POMZP3
TC2N
ETFDH
C4orf46
RAPGEF1
DHRS4L1
MAL2
PMEL
SLC35A5
ATG3
SGPP1
ICE1
NTSR1
NACA2
H4C12
H2BC15
H2AC15
CGRRF1
ZFAND3
HSFX4
EOLA1
EOLA2
RACGAP1
VIPR2
EAPP
ZNF585B
ZNF383
ACBD7
GLCCI1
LATS1
HSFX3
APBA2
ATP2C2
ARHGAP29
RGS19
OPRL1
LKAAEAR1
LRRC23
MYO1C
POLG
DOK5
ALDH3B2
METTL2A
AGTR1
KIF3C
ARRB1
FAM102A
OAT
TTC39C
ENO2
TXN2
PHRF1
TMEM225B
LARP1B
MMD
TLE4
DET1
SLC11A2
LETMD1
ZNF410
FXYD2
TBL1X
NOP58
TRIM7
QSOX1
ATF1
FIGNL2
PLEKHM3
RTEL1
IKBIP
APAF1
GGCT
LMNB1
ZNF263
VSIG10
ID2
NAP1L1
IBTK
GDF15
FOXN3
SLC12A3
SPIDR
SH3BGR
BICRA
MPZL1
GPBP1
SLC2A4RG
LIME1
LPCAT1
APPBP2
HNRNPH1
LUC7L2
FMC1-LUC7L2
FMC1
PPP6R1
POLR3GL
LIX1L
ANKRD34A
PCM1
SLC22A5
PPM1D
IFT46
ARCN1
SLC4A9
CCND1
TUBB4B
ZNF367
ATP5MC1
FAM166A
TEX19
TUBB6
BTN3A2
IKZF4
CACNG1
DACT3
NSUN7
PAK2
PLA2G2F
AFTPH
CLEC18B
FAXDC2
SMARCD2
ISG20
SFR1
TMEM211
AEN
ELF3
PSMD12
UBE2C
CRLS1
ASB8
TRA2B
PCDHA13
PCDHA12
MARVELD3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PM20D2
PJA2
INTS5
GANAB
AP2B1
PEX12
ABCC2
SLC2A3
ACSS3
SPATA2
SNX20
RNF114
VGLL3
ARFGEF2
PPIL3
NIF3L1
OR2W1
SMYD3
TPTEP2-CSNK1E
CRYGS
MAN2A1
SERPINI1
PDCD10
CLN8
ZNF185
KBTBD6
IL20
FAM151B
CAP2
BAIAP2
TAF13
DCLRE1B
AP4B1
ZFAND6
FAM104A
C17orf80
TXNRD1
VPS26C
TRIQK
TEX14
RAD51C
HES7
ALOXE3
PFKP
RASEF
RMND5B
NCK2
R3HDM2
INHBC
SERPINA3
MTMR11
ETV3
MKRN2OS
HSPB1
ACYP2
ATAD2
AARS2
KNL1
C2CD4A
MB21D2
PSG9
TACC1
UTS2B
CCDC50
ZGLP1
ABCG2
FDX2
BATF
SH3GL3
CHGA
COPS4
RCAN3
CYB561
CD276
ZBED9
GPR157
C8orf33
DICER1
SIK2
BRSK2
RGPD2
FOXF1
HSPH1
IL18R1
BAHCC1
TAB3
PSME4
IQSEC1
CNOT11
EIF2D
VPS4A
RPUSD3
KYNU
DCUN1D2
FAN1
TRIP4
PCLAF
CHD1L
PRKAB2
ACSS1
TNFAIP1
TMEM97
IFT20
CELSR3
KIAA1522
MMAA
ZNF213
NMNAT1
LZIC
ALG1L
ERBB3
MS4A8
PLAAT3
SAMD1
C19orf67
ARNT
SRSF1
PSMB7
LPAR2
KRTAP3-2
KRTAP3-1
POLR3G
MBLAC2
THOC3
DIO3
CRYAB
C11orf52
OR5A2
OR5A1
LSM14A
DIXDC1
MTFMT
HDAC8
ZMYND12
PPCS
PDCD6
HS6ST3
CCDC30
NSUN6
ARL5B
ZBTB46
POLR2D
YPEL3
CEP78
XKR9
LACTB2
PDCD2
GDPD3
NOTCH2NLB
NOTCH2NLA
GRN
ARHGEF37
LMLN2
HOMEZ
PKM
HJV
RAB13
SLC39A1
JTB
CREB3L4
LIMA1
GKN2
C14orf119
ACIN1
FAM72C
CDK11B
CDK11A
FAM72D
CNIH1
LRIG2
SEPTIN4
MTMR4
GATB
LENG1
SNX8
MUC3A
NFIA
AKR1B15
ACTN4
DIAPH1
CRABP1
TBC1D31
PATJ
RIPOR3
EHD4
IGF2BP3
GMNN
RERG
UBE2H
AIP
SPAG16
HIPK1
SLA
CLIP4
ZHX3
ANKRD33B
TRIM69
CCDC174
TXNDC16
PIKFYVE
FOXD3
RHOD
ZNF784
DUSP1
ZNF580
HIF1A
TAF9
RAD17
INTS2
AK6
ZNF623
SLC38A5
FTSJ1
NUDT4B
NUDT4
GRB2
PRKCI
KLHDC4
BRINP3
RNF34
TMEM229B
LYPD6B
PDZRN3
RPS9
SLC33A1
NME1
PDIA4
RPL35A
IQCG
SLC22A16
TLCD3B
ATXN7L3B
FAM227B
DTWD1
FST
SPATC1L
CCL22
CX3CL1
ZNF507
PRUNE1
MINDY1
KCNJ8
IGSF3
GPR21
FABP7
CSNK1A1
POC1B-GALNT4
POC1B
GALNT4
GTPBP4
VWC2L
UQCRB
TMEM183A
FAM72B
SSBP1
WDR72
TMEM125
CYP27C1
SLC35E1
ATXN1
ACO1
ARHGEF6
HOXB8
HOXB7
HOXB6
VAV3
ZMYM2
PNP
RNASE4
ANG
SHF
YWHAB
PIP4P1
INSM2
GABPB2
C10orf67
PRSS41
PLEKHO2
WBP1L
COMMD2
CEBPG
S100P
SF3B4
CPLX2
PIGX
CEP19
HPS1
INAFM1
OPA1
EIF3C
DHX8
NOL11
UBE2L5
SPAAR
HRCT1
MKS1
AADAC
OTX1
RAB5B
CDK2
HNRNPH2
GLA
TPD52
BCAS2
TMEM69
GPBP1L1
RGL1
ARPC5
CNNM3
RNF43
GRWD1
KCNJ14
GOLT1A
TMPRSS11F
RANBP6
KIAA2026
AP3M2
C9orf40
DYNC2H1
CLDN4
FAAP24
CEP89
RBMXL1
PGM1
PCBP2
MXRA8
KYAT3
APMAP
CSTF2T
GPR61
GNAI3
SRGAP2
EPX
ETFA
ZNF385A
PHTF1
CSDE1
C2CD5
KLF9
DCP1B
WDPCP
MDH1
MPP7
DBNL
SNRPB2
SULT1A4
SULT1A3
AEBP2
TRPS1
HSH2D
LIMS1
C6orf89
ID1
IMP4
CCDC115
BAX
PPIL1
PMPCB
ITSN2
ZNF398
GARRE1
PRRG2
NOSIP
ACOX3
TLR5
MARK1
LSM14B
CLIP1
GNB2
ATF7IP
HMGN1
DARS1
EPB41L2
CTSD
FOXJ2
DYNC1H1
GRAMD2B
SLC38A2
JPT1
SVIL
HSPA1L
HSPA1A
ATG9B
ABCB8
LSM2
SEPHS2
MIEF2
FLII
GSKIP
ATG2B
TGFB2
SUPT7L
SLC4A1AP
TOX4
RAB2B
KRT39
ARMCX5-GPRASP2
ARMCX5
EXPH5
DENND4A
TBX4
ARAP2
SULT2B1
TBC1D30
POLR3E
IPPK
SYCE1L
MON1B
EPHA7
MMP16
EPO
FBXO7
EVL
USP2
CBWD5
CBWD3
SLC22A17
SETDB1
OR13C9
OR13C5
OR13C2
PPP1R15B
STX1A
ADAM17
HNRNPA0
KCTD3
C8orf37
TRAPPC9
NRDE2
AP1M2
CLTC
ATP7B
ALG11
SGK3
CEBPE
SPINK4
AKIRIN2
SCGB1C2
SCGB1C1
ODF3
ZNF572
GATA3
E2F8
LEO1
H3C8
H2BC10
PRC1
TPCN1
KLHL12
STAT1
HBP1
PSME3
BECN1
TM2D1
CEACAM7
POLD4
C16orf54
ADCY6
ABCD4
OXSM
NGLY1
FZR1
SPATA9
RHOBTB3
NEBL
TSPYL4
DSE