ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424763 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◢ SRX11668227: K-562

◢ SRX11668228: K-562

◢ SRX186627: K-562

◢ SRX20731966: K-562

◢ SRX20731967: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ SRX3322072: K-562

◢ SRX3322073: K-562

◢ SRX2424762: MCF-7

◣ SRX2424763: MCF-7

◢ CUX1: STRING

FAM9A
DEFA5
MEIS1
ABR
TUBD1
RPS6KB1
DUX4
COX16
BCAS1
ACP6
RGCC
EIF2AK2
NUDT15
RPS29
TMEM214
SYCP2
PPP1R3D
FAM217B
SIRT4
SLC25A25
NAIF1
PAQR5
ESR1
SALL4
RAB11B
FRG2C
ERICH6B
PARD6B
IGFBP2
FAM102B
PMEPA1
PPP2R1A
SNRNP35
HJV
BNIP2
MLLT3
ZFHX2
THTPA
ZGRF1
LARP7
CYP24A1
DHX40
UBA5
ACAD11
ATMIN
NEDD9
PLCD3
ACBD4
CNPY1
KDM8
LOC102724770
DGCR6
SEMA3E
GREB1
SPAST
NANOG
IRF2BP2
PNPO
SLC11A2
LETMD1
KYAT1
PARP11
FBXL18
SLC25A35
RANGRF
FBXW8
GSTA4
LAPTM4B
NXNL2
FREM2
ART1
PCDHB3
PCDHB2
PDE6A
WIPI1
ABL1
CNTRL
C5
IBTK
POGZ
ITGA4
LDLR
VCP
FANCG
H3C3
H1-2
AHCYL2
CRLF2
FAM240C
SULF2
BFSP1
RDH12
RDH11
IGSF5
DICER1
EZH2
GMDS
TAF13
BCAS4
SACM1L
HOMER2
ZNF285
ARHGAP12
ANKRD33
SND1
CXCL9
ART3
PPP6R3
UBE2V1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DHX37
BRI3BP
QSOX1
OR8G2P
ZHX2
FAM160B1
WDR12
CARF
DEDD
COG3
CYP3A7-CYP3A51P
CYP3A7
CDK3
RNF19A
ANKHD1-EIF4EBP3
ANKHD1
DNAJC1
RPS3
ID1
PREP
OSER1
PJA2
C7orf50
CCK
BMP7
HCLS1
STK3
MAF
EVL
LY6G6F-LY6G6D
LY6G6F
ABHD16A
SLC38A1
VPS16
PCED1A
NECTIN4
KLHDC9
HSPH1
B3GNT3
CLK3
GNB5
CDH18
KPNA6
ARPIN-AP3S2
ARPIN
FNBP4
TBP
PSMB1
NTMT1
C9orf50
OR4F6
OR4F15
PALLD
SNRNP70
MTO1
CGAS
MBTPS1
WBP1
INO80B
ZMYND8
RAP1GAP
SLC35A3
TTC39C
EIF4E
TEX2
TMEM161B
CD55
IKBIP
APAF1
GLDN
CCL22
CX3CL1
PLSCR2
PLEKHM3
SRI
FAM102A
CYB561
HES7
ALOXE3
SNRPD2
QPCTL
PRKAB1
AASS
ARNT
RPN2
MROH8
CCDC200
MYO6
ZFAND3
SLC7A8
PTPRH
VSIG10
ATP6V0D2
STOML2
PIGO
BCL11B
SESTD1
MEIKIN
PFDN4
NAP1L1
NT5C2
CCND1
PFKP
ONECUT1
TSHB
ABCB5
STRIP2
PUS10
PEX13
R3HDM2
INHBC
NIPSNAP1
MAST2
VBP1
WDR74
STX5
RAP1A
PHACTR3
GRAMD1A
ZBTB46
SCN2A
ITPKC
COQ8B
CAND1
ARRB1
WEE2
DENND11
AP2B1
PEX12
ACSS3
TMEM237
ARL4D
TRA2B
CD36
SLC25A24
VAV3
TMEM141
CCDC183
ZNF77
TET3
ATXN1
CTBP1
DLG5
GDPD4
MTMR11
SPAG16
AKAP1
SGPP1
IQSEC2
GSTP1
ADAM17
TM4SF19
VPS4A
NCOA3
FRG2
LSG1
SNRPG
FAM136A
DUSP1
TXNRD1
SPINK1
ALDH3B2
ZFP91
LPXN
TMSB4X
PIK3CA
MAP3K3
SHMT2
TRIM55
KALRN
KRT19
FOXF1
ATP2C2
TMEM107
FOXJ3
NTNG1
NPR1
ILF2
MAMDC2
UBE2D2
POMZP3
NEBL
LIMK2
ZNF263
SH3BGR
SEC22B
CELA2A
GPR157
FOXN3
RTEL1
STMN3
TMEM161A
VPS33B
PRC1
COPB2
PLD1
ACTL6B
GATA3
LSM14B
MAN2A1
TMEM131
ZNF570
ZNF569
TTI2
SUSD6
PLA2G3
INPP5J
CLIP4
GTPBP4
DMRTC1B
DMRTC1
H4C12
H2BC15
H2AC15
SLC38A5
FTSJ1
HDAC8
PFN2
RBBP5
KRTAP5-11
HABP2
PPP1R12B
PDE4DIP
GPD1L
ZNF185
RBAK-RBAKDN
RBAK
NOTCH1
IFRD1
BCAS3
EXOSC5
BCKDHA
GFPT1
AIP
PYGL
LUC7L2
SLC48A1
FMC1-LUC7L2
FMC1
RAPGEF3
ADARB1
TJP3
PIP5K1C
MBD3L1
C2CD4A
ACBD6
SNX8
MAX
PM20D2
ABCC2
GUK1
MAP3K7CL
CCT8
PTP4A2
KYNU
BICRA
MTFMT
STPG2
NRBP1
ZFYVE26
RAD51B
MRPL48
RGPD1
LPAR2
ADAMTS1
TLCD3B
KHDRBS3
GRB2
CNIH1
CRABP1
GLIPR1L2
HSFX4
EOLA1
MIEF2
FLII
EOLA2
MYO5C
SNAI1
ZNF367
FTCDNL1
NOTCH2
FAM3B
MINDY4B
AKR1B15
NEMF
AEBP2
GCM2
AKR1E2
BMERB1
GGCT
KRT39
ETV7
PHLPP2
GMNN
MARCHF10
POLR2D
GP5
NEPRO
FTCD-AS1
ACYP2
KLRF2
DOK5
ZHX3
SAMD1
C19orf67
ASB8
MVD
C17orf58
CAV3
ZNF398
RNF212B
CDK1
STX16
METTL21A
RAD23B
KIAA1217
MDM2
ATXN7L3B
NDUFB6
ESX1
KLHDC8A
METTL27
KIFC1
CLDN4
SF3B3
COG4
ZNF623
KIF3C
LARP1B
SERPINA12
ADCY3
ZNF704
PTP4A1
SLC13A1
ARL13B
HSFX3
MTMR3
ACBD7
FBXO7
MID1
RNF34
REN
TSEN54
LLGL2
CASKIN2
SLC22A17
SLC35A5
ATG3
SYDE2
POSTN
ULBP1
PSME4
SERPINA3
ABCC5
TMEM241
MXD3
SLC2A4RG
LIME1
TBX2
ZNF410
RIOK3
POLR3E
ECHDC1
CD14
TMCO6
NDUFA2
IK
IL23R
SULT2B1
MIOS
VPS26C
DHRS4
TXNDC16
SLC9A6
WDR72
TBX4
DCUN1D2
ARHGAP32
ITPRID1
SERTAD2
ZC3H3
AARS2
SLC2A5
TRIQK
SLAIN2
C3orf20
TENM1
UBE2H
CLIP1
RHOB
POTEI
TBL1X
MYC
JPT1
CSTF1
AURKA
NHSL1
SIGLEC11
MGAT3
FNIP2
MIEF1
GRIA2
APOL4
RP1L1
GPR61
GNAI3
LATS1
LRIG2
SLC25A29
TRMO
CLK4
PRR25
GNG13
SHF
BZW2
EIF3C
RGPD2
TXN2
SMIM6
SLC26A7
RAB8B
RAB13
SLC39A1
JTB
CREB3L4
RIF1
ARID5B
AQP11
NTRK1
INSRR
RNF114
MTRES1
FKBP1A
GPRC5A
CHD1L
RASEF
RERG
BBX
ATG9B
ABCB8
USP32
ZNRF1
OS9
GRAMD2B
CHD2
AFTPH
MINK1
MPZL1
VGLL3
DAPK1
RABGAP1L
BCL10
ACSS1
FAAP24
CEP89
TCAF2
PSMG3
NBPF9
TPD52
SLC30A1
VKORC1L1
SYCE1L
MON1B
DEFB131A
OSBPL8
EHD4
PRKAG2
TRIM37
ARHGEF6
OR2F1
PHLDA3
UNK
H3-3B
NRDE2
ITPR1
ATP1A2
SPRED2
SLC4A9
MRPS10
DIRAS1
SLC12A3
RGS3
SCCPDH
ZBTB7B
LENEP
CCL15
CUX1
TMEM30B
HEATR4
ACOT2
KRTAP3-2
KRTAP3-1
INTS8
FAXDC2
TESK2
MMACHC
DZIP3
CIP2A
GPR65
SMIM10L1
PRH1-TAS2R14
PRH1
MCTS1
TAS2R42
PSMD6
BORCS6
FBXO11
ZNF212
PLA2G2F
ANXA2
ZNF598
NPW
EMP3
DYNC1H1
KIF5C
IKZF4
LYPD3
TMPRSS11F
ACOX3
KRT7
POLG
CBWD5
EPHA7
NTAN1
MPP7
BASP1
MRPS33
MMP13
SLC39A9
ERH
FHL2
ADCY5
MFSD2B
TMEM225B
SMYD3
CLDN9
CLDN6
CAST
WEE1
ZNF507
CALHM4
PROSER2
DLX2
STRN3
AP4S1
POLR3GL
LIX1L
ANKRD34A
KLK13
EREG
COP1
TET2
S100A16
S100A14
MS4A7
HDC
TBC1D30
ARHGAP35
E2F8
AZIN1
CREG2
MB21D2
SH3BGRL
HMGN5
ARFGEF2
DEPTOR
MANSC4
KLHL42
C8orf37
LPIN3
ZNF710
PKD2L2
YBEY
MCM3AP
SVIL
PSG9
FAM153B
ZNF662
LYPD6B
UXS1
PPP1R15B
VPS45
FAM227B
DTWD1
VEGFC
SPATA2
CSDE1
LIN37
PROSER3
HSPB6
ZNF335
CGRRF1
SKA2
PRR11
CLTC
MTRNR2L2
MSH3
DHFR
DAGLB
MTRNR2L8
IL13
CXXC5
BCL7B
PTPRF
IL1R1
MOB1B
TSHZ2
SLC6A9
MARCHF2
EMILIN2
VILL
DCLRE1B
AP4B1
SLC4A1
OAZ2
DNAJB2
ZNF852
NFE2
BNIP3L
SLC25A17
NRTN
DUS3L
RFX1
OAZ1
JSRP1
TRIM67
RPP25
ERMN
PDZK1IP1
RHD
SULT2A1
USP21
PPOX
RIPOR3
ZNF718
ZNF595
RELN
AGPAT1
BTNL10
MAN2A2
LYL1
COL18A1
LEPROT
LEPR
NOS1AP
FOXN1
TAL1
TMEM120A
CEBPE
SPATA46
C1orf226
AQP1
MACC1
TANGO2
ARVCF
BSG
OR10V1
MAGEA11
C3orf86
LMLN2
YPEL4
CLP1
FCGR1A
SERPIND1
ST6GAL1
PGLYRP4
GPR182
TFR2
SIGLEC12
NFIB
RHCE
SSH1
HERC1
GYPB
PYCR2
CA1
BTG2
RNF10
RINL
SLFN14
FKBPL
ATF6B
HNRNPF
AVPR2
HMX3
C1orf116
KCNN4
R3HDM4
KISS1R
DRC7
PPP1R14D
PI16
CPOX
BIRC2
PLCL2
SPTAN1
MAD2L1BP
GTPBP2
ANK1
GYPE
RTN4
TSPAN32
C11orf21
MRGPRX1
PPM1F
MTRNR2L9
ZNF117
ERV3-1-ZNF117
ERV3-1
KLF2
RAB33A
FGGY
TSPAN33
GYPA
KIAA1586
MTSS2
HAGH
FAHD1
ZSCAN31
LIMS1
PHF19
PRR5
CDC42EP1
FAM83A
UBE2F
MGAT5
SCMH1
PCNT
C21orf58
FKBP8
EPB41
SDE2
CMIP
CD2
FZD5
RCC1
PPP1R15A
TMEM9
MFAP3L
THEMIS2
PLEKHA4
OR2C1
HMBS
H2AX
RHAG
ATG4D
NPL
NXF3
TUBB1
TMCC2
RAB32
SEPTIN5
GP1BB
CFAP410
MINDY4
INMT
STK11
GATA1
FAM214B
EHD1
NARF
ZNF451
HDHD3
DNMT3B
COMMD7
GADD45G
RNF217
PRDM8
UBAC1
THUMPD1
NUPR2
CHCHD2
TXK
H1-0
GCAT
DOT1L
SBNO2
CCRL2
C11orf96
ARRDC2
DENR
SEPTIN9
ZNF564
SLC44A2
RUNX1T1
CRYBG1
HTR4
PAF1
MED29
HEXIM2
S100Z
ZFAT
TTC26
RMND5B
DDC
DHTKD1
EIF2AK1
RNF144A
DCP1A
ANKRD61
PTAFR
ZNF79
PCIF1
IL1RL1
ZNF347
KIF3B
SLC43A3
FECH
KCNH2
OR7A17
SLC14A1
CCDC88B
SLC38A8
CASS4
RFC1
KSR1
TMBIM1
CTPS1
ZNF33B
TRIM35
PTK2B
SNAP29
PI4KA
SPTBN4
BLVRB
MYCL
SPRR2A
SLC25A42
YJU2
ASIC4
ABCB10
SPINK4
TPGS1
PISD
PXN
HPCAL1
TF
TRIM63
MTRNR2L1
MFSD12
HDAC11
TMEM275
ORAI2
ALOX12
YIF1B
KCNK6
ATP6V0A2
SLURP2
MIER1
LYNX1-SLURP2
LYNX1
LY6D
DNAI4
TNFAIP8
SLC45A3
UCP3
FAM210B
LIPC
KNCN
GDPD5
CD300LF
DNMT3A
TENT5C
EXOSC9
PRDM11
SVBP
ERMAP
BCR
SLC2A1
SMCO1
RNF168
ASF1B
TMOD1
BHLHA15
RAD51AP2
ZNF273
CD59
CCM2
SMAP2
TMEM258
FEN1
ZNF669
HECTD3
DDR1
BSDC1
GAD2
MAP1LC3B2
ADAR