ChIP-Atlas: Target genes

Potential target genes for RFX1

Query protein: RFX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457514 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX1's Target genes

◢ RFX1: Average

◢ SRX5457513: Hep G2

◣ SRX5457514: Hep G2

◢ SRX2424672: K-562

◢ SRX2424673: K-562

◢ SRX2424777: K-562

◢ SRX2424778: K-562

◢ SRX2423398: MCF-7

◢ SRX2423399: MCF-7

◢ SRX2424431: MCF-7

◢ SRX2424432: MCF-7

◢ RFX1: STRING

QTRT2
CCDC191
TTC23L
SDCBP2
ZNF497
ACAP2
AP1S1
CCDC30
CEP112
DNAAF3
PPAN-P2RY11
PPAN
EFHC1
TPM3
CFAP36
SPAG16
PES1
WFDC3
DNTTIP1
TTC30B
BCL2L1
CACUL1
MAPRE2
STK19
DXO
RSPH14
RFC5
TP53BP1
NRSN2
MCM7
AP4M1
NEK10
ZC3H10
RHPN1
CCDC34
NAA40
LOC112694756
CFAP54
PUM1
PELI1
STK11IP
FZR1
SPATA2
MOK
CRNKL1
CFAP61
SF1
C1orf159
RNF139
NCOA5
DYRK1A
CCPG1
C15orf65
TMEM9
CYTH2
SMG7
RFX1
RPL35A
IQCG
CSNK1G2
ZSWIM1
FOXJ1
MOB3A
IZUMO4
SEC61A2
ZNF473
VRK3
KIFC3
DNAJC16
PTPN1
THTPA
PRMT5
SIPA1L1
UBE4B
TTC7A
MCFD2
MYADM
JUND
LENG1
DAD1
COPS3
THAP10
LRRC49
HSP90B1
TTLL9
EFTUD2
CCDC103
PRR3
GNL1
TOR2A
ZNF184
CFAP43
IPO4
NAP1L1
PPP1R12B
FAM120B
RNF5
AGPAT1
TMX4
SYS1
PIK3R2
ZNF324B
CCDC130
POLRMT
TCTN3
TSNAXIP1
RANBP10
PROSER3
HSPB6
MEAK7
PPP2R1A
C16orf46
FASN
PKIG
UBE2O
AANAT
DMWD
PAK4
WDR54
C2orf81
LRRC56
JAM3
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
CARS1
KLHL18
KIF9
MPC2
DCAF6
TM9SF1
OVCA2
AHI1
CALR3
C19orf44
RFC2
ABI2
PNKD
RAB36
TTC30A
HSDL1
DNAAF1
GTF2IRD2B
GTF2IRD2
TPGS1
ORAI3
ID1
MIB2
RUNDC1
PTGES3L-AARSD1
PTGES3L
PCF11
NR2F2
SIK3
U2AF2
ZBBX
CATIP
DYNC2I2
MOCS3
DPM1
MFSD4B
CCDC113
LINS1
ASB7
SGTA
STK32C
LRRC27
COPB2
TCTEX1D4
BTBD19
BRCA1
YIPF3
POLR1C
IFT172
SPATA33
METTL15
KIF18A
MBD4
IFT122
C11orf49
OTUB1
IQCH
AAGAB
PDE4A
EFCAB12
NUMA1
LRTOMT
NUDT2
KIF24
ARL2BP
PIN1
HMGCS1
CHURC1-FNTB
CHURC1
MZF1
CHCHD3
TMEM67
CEP41
RALB
ZBTB48
ARL4A
POFUT2
MICOS13
HSD11B1L
DYNC2LI1
PDCD6
MED25
THNSL1
RSPH1
TSEN2
IPO11
RNF40
CCDC189
EBNA1BP2
CFAP57
C17orf97
SNRPF
PRKCSH
CCDC151
C7orf50
DUSP3
ZNF768
TRIT1
NPHP1
BSG
COG7
SPN
SIK1B
SIK1
PARS2
TBCEL-TECTA
TBCEL
SYT5
CDK4
PRKN
PACRG
GTF2E2
CPLANE2
LRRC73
DUSP6
ITSN1
CRYZL1
WDR35
KRT8
DYNLRB2
DSTN
BFSP1
ZNF862
FAAP24
CEP89
TTLL1
E4F1
TMF1
KATNIP
GTF3C1
PRKAR1A
TRAPPC2L
GALNS
PREPL
CAMKMT
CTU1
PICK1
C2orf73
KIF3B
ABAT
IQCE
PMVK
DNAJA1
APTX
MORN4
TRAF3IP1
EIF2S2
PBXIP1
YWHAQ
TULP3
RFX2
NME9
LPIN2
PPP1R21
SPCS1
GLT8D1
ARFGAP1
ZC4H2
ENDOV
RPP38
MAFA
L3MBTL2
DYNC2I1
TMEM53
ARMH1
NUCB2
ETFRF1
CFAP94
CBX8
RTF2
DNAH7
GOLGB1
RNF141
PCSK1N
DYNLL1
DAGLA
UBXN2B
MAPRE3
DHX40
FKBPL
FHAD1
MAN1B1
FAM204A
TMEM91
B9D2
SPATA17
GPATCH2
COQ7
ARMC9
DCP1B
RALGAPA1
UVRAG
CCDC74A
WIPF2
HSPBP1
LRRC6
RFX3
HMG20B
TSPYL4
DSE
LMAN2L
SARAF
DNAAF2
ELMOD2
RABL2B
PRDM4
JUN
POMT2
GSTZ1
TMEM107
IQCC
ELP1
ABITRAM
KMT5C
CXADR
UBXN6
SHOC2
BBIP1
REPIN1
LRRC46
MSMO1
RPF2
TSGA10
C2orf15
MLEC
SYVN1
ZIM2
PEG3
REEP6
PCSK4
CCDC74B
WDR90
POLR3H
FBXW7
B9D1
G3BP1
SH3BGR
LCA5L
CLBA1
FOXO6
RAB11FIP2
ERCC1
MRPS21
DYNC2H1
TMX2
MED19
SPICE1
YWHAE
YWHAZ
FSIP1
POLL
DPCD
NDUFA8
MORN5
USP54
STOML2
FAM151B
UFSP2
RPS27A
CLHC1
NQO1
ANGEL1
SRFBP1
BBS1
INTU
EFCAB2
TBC1D32
P4HA1
C20orf27
TADA2B
CCDC96
HSPH1
THBS3
MTX1
TREX1
TXNDC17
KIAA0753
MIER1
DNAI4
HM13
TMEM231
CD68
SREK1
VTA1
NMBR
RND2
ITGB3BP
EFCAB7
TPCN1
IQCD
FBXL13
ARMC10
ACOX3
SFXN2
ARL3
HMGCR
LYRM4
FARS2
MYCBP
CEP135
GTF3C4
DDX31
ESRRA
NDUFA5
SRSF7
TRIM36
TNRC6A
PANK2
BTBD3
RIN1
INO80B
KIF23
E2F3
CENPH
DNAJC1
BDP1
CFAP53
ANKRD54
HMGN2
ZNF324
NME7
BLZF1
TBC1D16
CCDC40
IFT57
RRP12
IFT22
GFER
INTS8
XRCC1
PINLYP
FAM110A
ODF3L1
MARCHF8
LRRC23
ACTR6
SF3A1
CCDC157
CYSTM1
AGPAT5
WDR74
TASP1
CEP152
PCGF1
CSNK1G1
USP30
TIGD4
ARFIP1
KIF6
TRIP12
FBXO36
CNOT8
ERICH2
KLHDC10
ARL13B
WDR31
DUSP18
SPAG8
TAF6
CNPY4
ARRDC4
NEMP1
TEKT1
CCDC57
FOXN2
CEP162
NEK2
CFAP126
ALKBH5
WWOX
C2orf50
TXNL4B
DHX38
RSPH3
WDR73
MSH5
L3HYPDH
JKAMP
GAS8
MORN3
ASPA
MAFG
ZNF446
BBS12
BRMS1
FOXN3
CYC1
MARK3
SLC25A3
PRR29
FANK1
SAXO1
RRAGA
SLC25A46
TTF1
AZIN2
KLHDC9
FBXW9
PSMC3IP
SPEF2
SPG21
PCGF2
FAM227A
CBY1
DIS3
FAM47E-STBD1
FAM47E
POLD3
ZFP36L2
GPR107
CCNB1
AP2S1
ZFYVE28
CFAP99
UBN2
SPATA4
RBBP6
TMEM234
EIF3I
WDR93
PEX11A
IFT81
DYRK3
ERICH6
CIPC
AP3D1
SMARCAD1
LRPAP1
ERF
ALS2
CYP46A1
CCS
CCDC87
OSCP1
CHN1
TEX2
IP6K1
BRD3OS
PPP1R16A
MYG1
ARMC3
KNOP1
LMBRD1
WIZ
TCTN1
C1orf194
DHX16
ZNF24
MORN2
DHX57
UBXN11
CDC37
CABIN1
PGD
SEMA4B
PCNX4
STK33
MVK
SDE2
IRAK1BP1
CEP43
MED31
C17orf100
EFCAB10
SPACA9
AK8
AKAP6
RUFY2
TECPR2
CINP
CEP295NL
ZNHIT1
PLOD3
CACFD1
NAA38
CYB5D1
MICOS10-NBL1
MICOS10
THG1L
TNPO1
TMED10
HNRNPF
LRGUK
BSCL2
TOGARAM1
KLHL28
SLC27A1
ARL6
OR2F1
C12orf71
TEX264
STXBP4
COX11
PCM1
DRC7
TOM1L2
DRC3
UVSSA
CDH4
LETM2
QTRT1
SPEF1
MRPS2
C9orf116
MAP3K14
RABL2A
BTRC
PPP1R11
PLIN5
CENPS-CORT
CENPS
CLUAP1
PIH1D2
NKAPD1
ING2
AOPEP
WDR19
C4orf48
IFT74
KIF27
PNMA1
C16orf71
ANKS3
SORBS2
DCAF15
PCOTH
MIPEP
PNP
SLF1
KIAA0825
STK35
NACAD
RSPH4A
WDPCP
MDH1
NET1
ENTPD5
BBOF1
RBKS
BABAM2
PLXNB1
GLRX5
CCP110
CYSLTR2
ARMC2
FSD1L
WARS2
CFAP58
ZNF594
TUBE1
FAM229B
ZNF584
AP1M1
ZC3H3
STPG1
NIPAL3
DNAH6
MTF1
NDUFS3
KBTBD4
PSMB5
TCTN2
RASGEF1B
CACYBP
CEP164
PKP4
CCDC148
GMPPB
ZDHHC1
AGTRAP
BCLAF1
CCDC175
CCDC107
XPR1
TRUB2
COQ4
SHQ1
NBR1
LOC101928764
GET3
CELF6
PSMB7
ZNF76
HAT1
MKS1
KIAA0232
TENT5C
SAXO2
EFL1
PPM1E
DNAJC24
DCDC1
FAM234A
ZNHIT2
VPS53
ODF2
ENTPD7
SMIM6
EIF2S1
ATP6V1D
ING1
NAT14
DNAJC10
EML1
RPGRIP1L
FTO
YOD1
PFKFB2
RER1
MORN1
RUFY1
LOC390877
GTF2F1
ZSCAN5A
PACRGL
ERI3
SSX2IP
FAM214A
TPST1
GPR137
BAD
HYDIN
GTF2I
FAM160A2
PHTF1
DNAH12
CCDC146
KIFBP
FAM86B2
SEC16A
C9orf163
MNS1
ARF3
KTI12
GPN1
CCDC121
TOB1
PTPN13
ZBTB40
STX18
DENND2B
TRMT5
SLC38A6
CRIP2
POLI
CATSPERG
KIAA0895
LTV1
GALK2
COPS2
AJM1
ARID4A
IQANK1
FAM83H
SFR1
CFAP298-TCP10L
CFAP298
GEMIN8
OXNAD1
DPH3
ALMS1
DNAH10
ABCB8
SDCBP
EIF4E3
RPN1
PIFO
RPS6KA5
DGLUCY
DNALI1
TIMM21
FBXO15
ICA1L
ZNF664-RFLNA
ZNF664
CCDC92
SSBP4
ZNRF1
NAA20
DPY19L1
E2F8
CEP126
HNF4A
PRKAR2B
C11orf97
CDC14A
SLC25A14
EHD1
LOC728392
CCDC170
C16orf86
SYBU
MEAF6
TSPAN3
FAM185A
FBXL14
ARHGAP39
LRP2BP
ANKRD37
SF3B5
STRN4
IL15RA
PPP1R42
ATP7B
ALG11
POLR3F
DZANK1
ANO3
TEDC1
HSPA1B
MAPKBP1
IQUB
TCTEX1D2
CCDC39
DNAJB13
ARRDC3
SWI5
GOLGA2
LMLN
FER
GDE1
PRUNE1
MINDY1
TSPAN19
LRRIQ1
ZNF709
TEX9
TDRP
ANKRD13D
TTLL5
ERG28
PLEKHG5
MYPOP
SPATA7
HSPA12A
ENO4
FAM222A
TECR
DNAJB1
TOB2
RP2
CBX6
UBL3
SNX25
CFAP97
SETD4
FKRP
DIXDC1
PEF1
ZNF165
TTC26
C7orf57
TAOK2
ZNF214
NLRP14
CFAP69
SMPD2
PPIL6
CATSPERB
SFI1
TMEM209
PRKAR1B
RFX4
GNL2
FAM104B
CAPS2
TUB
BCO2
DNAJC25-GNG10
DNAJC25
TCP11L2
INTS3
ODC1
USP2
LRIF1
FAM183A
SWSAP1
TTLL6
LRRC70
ITPK1
ATAD3A
ANKRD45
CLIC1
CCDC32
DNAAF6
RAVER1
DDX3X
UBFD1
EARS2
MCAT
FAM161B
COQ6
RAD23B
UBE2Z
AXDND1
PSMA5
GPSM3
LIMS1
EDEM3
STX12
NUDCD1
ANKRD34A
MINK1
POLD2
KIF14
COPZ1
PFDN5
JMJD8
HS1BP3
SS18L2
SEC22C
SUGT1
UBB
TOMM7
PHC1
MAPK7
NSFL1C
TRIQK
VPS13A
AMPD2
HIGD2B
BBS4
TBC1D19
ADGRA1
CALML4
EFHD2
SLC25A27
CYP39A1
AP3M2
TOR3A
FAM227B
DTWD1
PYY
NAGS
SPAG1
FER1L5
CFAP74
DENND6B
TRMT12
COMMD8
CXorf58
TTC12
NUMB
TSPAN4
TMEM186
PMM2
CYB561
CENPF
C1orf189
KCNK15
SPATA24
SERTAD3
PHF20
HPCAL4
BBS5
NEK11
ASTE1
RHBDD2
ZNF487
ZNF398
MLF1
THADA
CALM2
PELI3
MUL1
EPN1
DNAL1
TRIM39
CFAP73
CAMK2A
SPA17
SIAE
ANKFY1
BRD2
CXXC1