ChIP-Atlas: Target genes

Potential target genes for RFX1

Query protein: RFX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424431 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX1's Target genes

◢ RFX1: Average

◢ SRX5457513: Hep G2

◢ SRX5457514: Hep G2

◢ SRX2424672: K-562

◢ SRX2424673: K-562

◢ SRX2424777: K-562

◢ SRX2424778: K-562

◢ SRX2423398: MCF-7

◢ SRX2423399: MCF-7

◣ SRX2424431: MCF-7

◢ SRX2424432: MCF-7

◢ RFX1: STRING

PES1
CHURC1-FNTB
CHURC1
DNAAF3
TCTN3
ZBBX
PTPN13
PROSER3
HSPB6
TTC7A
MCFD2
RFC5
SIPA1L1
AP1S1
NAA40
CFAP251
QTRT2
CCDC191
CFAP36
RPL35A
IQCG
SF1
DYRK1B
CFAP91
NAP1L1
TPM3
ANGEL1
ZNF473
VRK3
STK19
DXO
CDK20
ORAI3
MAPRE2
EFTUD2
CCDC103
OVCA2
CRNKL1
CFAP61
CACUL1
MBD4
IFT122
WFDC3
DNTTIP1
COPS3
THNSL1
ZNF324B
SDCBP2
TMEM9
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
LOC112694756
DSTN
BFSP1
C11orf49
PPAN-P2RY11
PPAN
TSPAN19
LRRIQ1
DNAJC16
HMGCS1
HSP90B1
KLHL18
KIF9
PELI1
SPATA17
GPATCH2
TTC30B
PUM1
MORN3
TM9SF1
ZC3H10
MAPRE3
PRR3
GNL1
RHPN1
MEAK7
TTC23L
UVRAG
MCM7
AP4M1
TP53BP1
ZNF594
ACAP2
UBXN2B
IFT22
TREX1
IQUB
ZNF184
RRP12
HSPH1
RNF139
PDCD6
DYRK3
CCDC30
MORN4
GTF3C4
DDX31
C7orf50
NRSN2
PCF11
POLRMT
TTLL9
ZNF287
CALR3
C19orf44
ENDOV
PRKCSH
CCDC151
PIK3R2
TPCN1
IQCD
C2orf73
ZNF497
OTUB1
MOB3A
IZUMO4
ZSWIM1
IQCH
AAGAB
FZR1
CYTH2
TMEM67
CCDC34
SRFBP1
POLL
DPCD
SYS1
NME9
DMWD
ZBTB48
CFAP73
CCPG1
C15orf65
MFSD4B
IPO11
DYNC2I2
SSBP2
MOK
WIPF2
FAM183A
THAP10
LRRC49
BCL2L1
CFAP54
DHX40
STK11IP
TOR2A
RTF2
CCDC74A
JMJD8
CCDC184
MIB2
NCOA5
LINS1
ASB7
EFHC1
PTPN1
SNRPF
LRRC46
ZSCAN5A
TMEM53
ARMH1
CSNK1G1
RSPH1
LENG1
DYRK1A
PPP2R1A
HSPBP1
ZC3H3
FOXN2
MOCS3
DPM1
CRIP2
TSNAXIP1
RANBP10
PARS2
CEP112
MRPS21
RND2
GRIK5
E4F1
RNF32
CTU1
CDK4
PRKAR1A
CYP46A1
RFX1
PRDM4
SPATA2
ITGB3BP
EFCAB7
NEK10
HSPA12A
ENO4
MAN1B1
THTPA
HIC1
MVK
THG1L
DYNLRB2
POFUT2
MINK1
LRRC56
RAB36
KRT8
MAPK10
DNAH7
ARRDC4
FAM214A
TRMT5
SLC38A6
PRR29
STK32C
LRRC27
CIPC
TTC30A
XPR1
YWHAQ
PPP1R21
PICK1
DNAAF2
CHCHD3
CENPH
NUDT2
KIF24
SMG7
SAXO2
EFL1
ARMC3
EFCAB12
ZNF862
DNAH6
TSEN2
FHAD1
RNF5
AGPAT1
U2AF2
TMX2
MED19
HMG20B
RFC2
COPB2
WDR13
CEP41
TMEM107
WDR54
C2orf81
INTS8
POMT2
GSTZ1
GOLGB1
BRCA1
MLEC
SEMA4B
TXNDC17
KIAA0753
SLC4A8
NUMA1
LRTOMT
RBBP6
DAD1
MSMO1
SHOC2
BBIP1
CCDC175
CFAP58
NR2F2
GPR107
XRCC1
PINLYP
RUNDC1
PTGES3L-AARSD1
PTGES3L
CHD4
CPLANE2
AKAP11
ARL13B
AHI1
LOC728392
TEKT1
G3BP1
PANK2
DCAF15
PODNL1
TOB1
METTL15
KIF18A
TSPYL4
DSE
RALB
RNF40
CCDC189
SYVN1
ELMOD2
TMF1
WDR73
MAFA
ARMC2
PPM1E
TCTN1
FAAP24
CEP89
STX8
CFAP52
PHTF1
HMGCR
EBNA1BP2
CFAP57
MYADM
ALKBH5
HSPA1B
PRMT5
TOM1L2
DRC3
PAK4
COG7
OSCP1
ZNF768
SIX3
GTF2IRD2B
GTF2IRD2
E2F3
MRPS2
C9orf116
CLBA1
KIF23
TRIT1
C2orf50
POLR3H
YIPF3
POLR1C
TBCEL-TECTA
TBCEL
KLHDC10
RUFY1
USP30
DYNC2I1
CATIP
PPP1R11
ERICH6
DCDC2B
FOXJ1
PIN1
LETM2
TRIM36
ACTR6
SPATA13
C16orf46
RIN1
ARL6
BCLAF1
TMEM91
B9D2
CCDC74B
B9D1
STOML2
P4HA1
ABCB8
CACYBP
DYNC2LI1
L3MBTL2
C1orf159
LPIN2
SPAG8
YWHAE
FAM185A
MZF1
UBXN6
MED9
JUN
SFXN2
ARL3
ARFGAP1
FAM234A
NAT14
WDR93
PEX11A
ARID4A
CCDC130
LRRC6
PPP1R12B
KATNAL2
TNPO1
FSIP1
DCP1B
TMX4
RSPH4A
IFT172
FUZ
CIB4
NACAD
C1orf194
NDUFA8
MORN5
NUCB2
CHN1
MYG1
RFX3
IPO4
FAM204A
SPEF2
CFAP43
GET3
SPICE1
OXNAD1
DPH3
BDP1
YWHAZ
KIFBP
WDR35
NEMP1
FOXN3
CCDC39
NAA38
CYB5D1
PCNX4
TEX264
PDE4A
KIF6
CFAP45
HYDIN
BBS1
CFAP126
FBXL13
ARMC10
RPS27A
CLHC1
IFT57
SLC27A1
FAM227B
DTWD1
PEF1
TPGS1
MED25
NDUFA5
C17orf97
KIF3B
TRIQK
RPP38
COQ7
CBX8
TXNL4B
DHX38
UBE2O
AANAT
NDUFS3
KBTBD4
TRIM41
MICOS13
HSD11B1L
ERICH2
PREPL
CAMKMT
TMEM231
DYNC2H1
CCS
CCDC87
DNAJC1
SREK1
PGD
KMT5C
STRN4
FKRP
ITSN1
CRYZL1
ID1
TASP1
PIFO
HMGN2
MIER1
DNAI4
UBXN11
DNAH2
USP54
EFHD2
RALGAPA1
NQO1
SWSAP1
C4orf48
C16orf71
ANKS3
CEP152
ZFYVE28
CFAP99
KATNIP
GTF3C1
LRRC73
RPL30
ANKRD34A
TTF1
BSG
STXBP4
COX11
L3HYPDH
JKAMP
LMAN2L
DNAJA1
APTX
HSDL1
DNAAF1
TRAK1
TAF6
CNPY4
PCGF1
SF3B5
WWOX
SPEF1
PRKN
PACRG
IQCE
BSCL2
FER
MAP9
TOR3A
YOD1
PFKFB2
MLF1
RASA3
WDPCP
MDH1
ADGRA1
AJM1
UBL3
HEATR6
TIGD4
ARFIP1
TENT5C
AXDND1
HNRNPF
RUFY2
EIF2S1
ATP6V1D
SLC25A3
TRMT12
MICOS10-NBL1
MICOS10
BRMS1
SFR1
CELF6
MARK3
CAND1
SDE2
SYBU
FANK1
CLUAP1
WARS2
NPHP1
PNP
CYC1
SLC25A46
HPCAL4
TULP3
DUSP6
EFCAB10
AP1M1
CARS1
CFAP20DC
DNALI1
PPP1R32
CCDC146
RPF2
HIGD2B
BBS4
VTA1
NMBR
ABHD2
PSMA5
SMC1A
RIBC1
INTU
SPATA33
SMARCAD1
LMBRD1
SPG21
CEP135
GNL2
PRORP
PPP2R3C
KNTC1
ACOX3
RAB11FIP2
EOLA1
RASGEF1B
KNOP1
BTBD3
TSGA10
C2orf15
PLEKHG5
PHC1
TMED8
SAMD15
CYB561
ZNF324
BTRC
AGPAT5
FAM151B
KCNH3
ZNHIT1
PLOD3
MNS1
UBN2
RXRA
SHQ1
SMIM5
RTL5
GLRX5
TBC1D16
CCDC40
QTRT1
ALS2
FAM161B
COQ6
DYNLL1
RPN1
TRIM2
TADA2B
CCDC96
EDEM3
ZNF76
SRSF7
CSNK1G2
TTLL5
ERG28
ARF3
POLD3
C7orf57
HNRNPH2
GLA
HS1BP3
LRGUK
DLG4
TAOK2
ZNHIT2
DUSP3
FBXW7
ERCC1
GPR137
BAD
NUDCD1
ZNF446
ARL4A
IRAK1BP1
MYCBP
CNOT8
DUSP18
ETFRF1
CFAP94
EHD1
TECR
DNAJB1
IFT81
GEMIN8
INO80B
FOXO6
FANCI
ANKRD54
IQANK1
FAM83H
MSH5
RGS3
KCNK15
ZBTB40
CLCN3
CDK9
SH3BGR
LCA5L
DNAAF6
OTUD5
RAD23B
THBS3
MTX1
SRSF1
EIF2S2
TUBE1
FAM229B
MEAF6
CFAP298-TCP10L
CFAP298
KIF14
PKP4
CCDC148
SWI5
GOLGA2
ZNF627
AP2S1
IP6K1
PSMB5
SPATA4
FAM227A
CBY1
KLHDC9
NBR1
TOGARAM1
KLHL28
RSPH14
SYT5
PPP1R42
STX12
BBS12
MAP3K14
TMED10
C8orf37
TCTEX1D4
BTBD19
FAM110A
LRPAP1
CFAP47
CFAP157
RAVER1
LTBP4
NET1
BRD2
TBC1D32
FER1L5
TTC8
AGTRAP
TRUB2
COQ4
STPG1
NIPAL3
TCTN2
SGTA
BBS9
SPCS1
GLT8D1
ZNF444
SLC25A14
CATSPERG
FKBPL
MORN2
DHX57
GRWD1
PLXNB1
RNF141
TMEM209
GOLPH3L
DNAL1
DIS3
ATP13A1
WIZ
TRIM37
SYT6
TRIP12
FBXO36
RP2
DDX3X
PCOTH
MIPEP
POLI
MYPOP
TEDC1
UBB
LEKR1
FAM104B
CEP162
DCAF12
CFAP92
KIAA1841
ZNF165
GAS8
PEX16
TCTEX1D2
USP2
WDR31
GTF2E2
DNAJC10
E2F8
ARG2
AP2A1
FLACC1
CDC37
FAM86B1
TMEM232
PIK3R4
MPC2
DCAF6
RAD50
TEX2
ZFAT
ODF2
ABI2
NUMB
PSMB7
SAMD4B
CCNB1
DALRD3
CCDC32
JAKMIP2
CABIN1
TMEM234
EIF3I
ELP1
ABITRAM
POLD2
STX18
ATAD3A
DRC1
SPATA24
WHRN
ZNRF1
EMC3
SF3A1
CCDC157
FAM47E-STBD1
FAM47E
ALPK3
IDH2
LOC390877
GTF2F1
KTI12
SIK3
SARAF
RPL22L1
CCDC13
CDC14A
ZNF709
NME7
BLZF1
SETD4
PACRGL
VPS53
SIX2
CHCHD5
SPATA6
NCALD
RPS6KA5
DGLUCY
REPIN1
KIF27
DNAJC24
DCDC1
JOSD2
CFAP69
CCDC113
COPZ1
PTPN4
TAPBP
WDR27
C6orf120
HM13
DRC7
MED31
C17orf100
CCDC153
NAA20
RSPH3
SNAPC1
MICU2
MKS1
IQCC
CCDC107
LRRC23
FBXW9
LYRM4
FARS2
POLA2
WDR19
CCDC160
WDR17
CFAP53
ERF
MIA3
GOLM2
PBXIP1
NUDC
RNF20
CCDC28A
H2BC18
UVSSA
UMAD1
MATK
ING1
PKIG
C20orf27
SMC4
IFT80
TTC26
ATP1A1
WDTC1
DCTN3
AMZ2
CFAP300
ZNF713
DAGLA
STK36
RNF25
RBKS
BABAM2
FBXO16
RNF182
UBE2Z
TEX9
DHX9
CAMK2A
HINFP
PNKD
IL15RA
C12orf71
SMKR1
VDAC3
GPATCH4
PNMA1
E2F5
GFPT2
PRUNE1
MINDY1
TMEM186
PMM2
RUVBL1
ATP7B
ALG11
PSMC3IP
TMEM109
RGL1
ARPC5
BRWD3
ZNF24
AP3D1
DNAJC25-GNG10
DNAJC25
SUGT1
IFT74
NEK2
SASH1
SH3GL3
SF3B4
CABCOCO1
TUBA1A
UFSP2
GPN1
CCDC121
HAT1
REEP6
PCSK4
PCSK1N
MARCHF8
GALK2
COPS2
CSTF3
PARP8
MARCHF10
SPN
CAPS2
SPATA7
EIF4E3
CCP110
CNNM4
DERL1
RHBDD2
PHF20
PCDH1
MAFG
AOPEP
VPS13A
WDR47
POLR3F
DZANK1
BBS5
SPAG1
RER1
MORN1
CYSTM1
LOC101928764
KLF4
BRD3OS
RTL6
LRIF1
ZSWIM2
EFCAB6
JUND
ADGRG1
RPGRIP1L
FTO
RBM23
MYH10
GFER
COQ8B
APLP1
SERTAD3
CADM1
ESRRA
PLIN5
ENTPD5
BBOF1
EIF2B2
ZNF584
LMLN
CBLB
TNRC6A
IGSF9
TTLL6
AZIN2
KIAA0319
KIAA0895
TTC16
PTRH1
C2CD2L
INTS3