ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728789 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◢ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◣ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

WDR74
MTRNR2L8
CYP4F11
MTRNR2L2
RGPD2
RGPD1
SNX16
SCML1
USP17L8
DBF4B
ZBTB40
CDK12
SCNM1
LYSMD1
SMG5
ZNF684
C22orf34
ZMPSTE24
EXO5
MRPS14
ATF6
CAP1
TFPT
PRPF31
STX16
MTBP
MRPL13
ZBTB45
MRPL21
IGHMBP2
DMAP1
DPY19L4
UBE3B
KCTD10
SUPT7L
SLC4A1AP
MRPL44
ITGB3BP
EFCAB7
USP30
FAM207A
MED23
INTS12
GSTCD
NME1
NDUFS7
VPS13B
RPS7
TOP3B
MAF1
PEX3
ADAT2
TARS2
IPO4
SF3A3
WDR24
DCP1A
DUS1L
NDUFB3
FAM126B
GOLGA3
REXO4
AAR2
SNAP47
JMJD4
CCAR2
CDK5RAP1
TMEM41A
NDUFS3
KBTBD4
COPS7B
SUGCT
MPLKIP
GTF3C3
TRIP4
BRF2
WDR83OS
WDR83
STX18
RFXANK
BORCS8-MEF2B
BORCS8
SMG8
FRA10AC1
BMS1
ISY1-RAB43
ISY1
ALKBH3
GEMIN7
GALK2
COPS2
MRPL40
HIRA
ZNF408
ARHGAP1
MAIP1
TACO1
DCAF10
MRPS31
PRRG2
NOSIP
PIH1D2
NKAPD1
HMGB1
MLEC
RAD54L2
B4GALT7
VPS52
RPS18
EIF1AD
BANF1
NUF2
USPL1
TMEM242
RTEL1
MAN2C1
TTC4
TBC1D19
RBBP5
WDR36
GFM2
TMEM222
ZER1
SLC24A1
NSFL1C
DSTYK
CCDC97
SLC33A1
MRPL30
MITD1
FAM228B
TATDN3
NSL1
MTERF4
ZNF165
COMMD2
TOR1AIP1
UTP3
DRG2
SF3B6
ZNF391
SLC35A3
NR1H2
SEC13
RTTN
MRPL3
ZNF791
ZNF490
MBTPS2
NOL8
CENPP
EIF3F
TEFM
METTL9
MKRN2
VPS25
AURKAIP1
ZDHHC6
VTI1A
TUT1
LSG1
SSBP1
FAM227B
DTWD1
GTF3C5
NOL12
GTF2H2C
GTF2H2C_2
PSMF1
C17orf75
RPL37
NOXA1
YIPF2
TIMM29
TRUB2
COQ4
TNPO3
KLHL20
GTF2H2
MRPS18C
HELQ
FAM98B
TMEM101
SLC39A3
SLC44A1
CPPED1
NMNAT1
LZIC
WDR31
ACSF3
BBS1
PPIP5K2
CCDC57
ZNF770
MNAT1
SMG7
SEC22B
RUVBL1
EEFSEC
MRPL1
ALG10B
MTMR9
EDC4
FEM1B
SCAND1
WDR11
NR1H3
ACP2
INO80B
SLC39A13
OTUD7B
C11orf49
TMA16
GTPBP3
PLEKHM3
NOP16
HIGD2A
UBA5
ACAD11
COX16
SAR1B
AQR
ZNF276
VPS9D1
SELENOH
SNRPD3
GUCD1
RNF6
RRP15
KCTD5
YJU2
MRPL16
TVP23B
C12orf73
DDX1
TSPAN10
NPLOC4
NUP54
PSMG3
STOML2
PCID2
CUL4A
POLR3B
HNRNPA1L2
EIF2D
MRPL48
NDUFC2-KCTD14
NDUFC2
C18orf21
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HEMK1
TIGD1
EIF4E2
INTS5
ZSCAN22
HUS1
TTC26
NKAP
JRK
CPSF1
RPL29
DNAJC25-GNG10
DNAJC25
PEMT
ANAPC5
SENP1
PFKM
PHB2
MRPL58
CSTF2T
MTOR
RBM28
EXD2
NELFB
CHCHD2
PDCD6
MRPS34
EME2
AGK
NUP107
PUS10
PEX13
DHX33
FBXO22
YBEY
MCM3AP
MTIF2
CGGBP1
LTN1
ALG10
ZNF581
THEM4
PIGL
RAB18
SEC11A
ZNF623
TBC1D13
NUDCD3
C10orf88
VPS45
C3orf38
PPIL3
NIF3L1
MEIG1
SLC25A53
TMEM69
NXT2
BLOC1S6
CCNC
STARD3
TRDMT1
ATPAF1
MRPL39
ERI1
GTF2H4
LRRC49
LMAN2
THAP10
HDAC8
MPHOSPH10
MCEE
CFAP298-TCP10L
CFAP298
SNRPB
KRR1
TMEM68
TGS1
CYREN
ANKRD40
GRPEL2
SEC16B
ZNF205
PDCD6IP
COQ3
LAS1L
COA6
PHKA2
MKRN3
TIMM9
KIAA0586
TXN2
ZBTB11
WDR25
WARS1
PPIL1
MCAT
ANTKMT
EXOSC4
ZNF668
ZNF646
PCYT1A
TEDC1
DNAJC24
DCDC1
NFKBIL1
ATP6V1G2
PRSS27
IFTAP
SPAG8
FBXW8
BCAT2
DNAJC2
TIGD6
HMGXB3
CLK3
MED18
DDT
ACBD6
POLDIP3
FAM118A
COPS4
PDCD2
GABPA
ATP5PF
DDTL
SNRNP200
MTRF1
ZC3HC1
RPS4Y1
ZNF579
MTR
AGO3
KIF22
UQCC1
OPA1
ZNF561
ADPRHL1
RFX7
MRPS22
ARL6IP4
TUBGCP3
MFAP3
FAM114A2
SREK1IP1
CWC27
C8orf33
TSSC4
BANP
VWA8
RPS20
ZNF596
ZNF564
NSUN4
LIG4
ABHD13
CARD8
TXNDC9
EIF5B
UFC1
DPP9
MST1
MTMR4
NUDT5
CDC123
EMC4
SLC25A21
SRP19
FBXW11
DLST
IPPK
SDHAF3
PPID
SBDS
ZNF195
GFM1
ZNF558
TDP2
ACOT13
RFC4
ZNF461
ZNF622
TYW1B
ZNF570
ZNF569
ZNF846
MTRNR2L9
ERCC6L2
NEU3
NUP153
TMEM199
POLDIP2
DPH7
NAA20
YIPF3
TMEM128
POLR1C
PTPRM
ZSCAN9
CDC16
SH2B1
MTHFD2L
PPP1R11
C12orf57
PIGQ
FBXO28
ECHDC1
UBIAD1
RSPH3
OGFOD2
TUFM
TYW1
LRRC58
FAM168A
SMIM19
SLC20A2
UNC50
COA5
MTG1
USE1
NOTCH2NLC
CLOCK
STMP1
C16orf46
NVL
ATG5
KNSTRN
CCDC200
PRKAB1
DNAJB12
LRRC8A
KYAT1
ZNF549
ZNF410
METTL6
EAF1
NFIB
SRSF7
MRPL53
CCDC152
NUDT4B
NUDT4
FBXW2
EXOSC3
PSMD6
FANCM
CSTF2
NOTCH2NLB
NOTCH2NLA
TTC14
C4orf3
TAF12
MARK3
SIRT4
EIF3D
NDUFA12
VPS26C
MAGEF1
CNPY3
SDR39U1
WDPCP
MDH1
STK3
VIPAS39
AHSA1
MAP2K5
SPCS1
GLT8D1
ZKSCAN4
MVB12A
PYURF
PIGY
HERC3
DPAGT1
H4C14
SPATC1L
C8orf76
PSME3
ZNF302
HSP90AB1
PUM3
H4C15
ALDH3A2
SUGT1
PSMD11
TM9SF3
NDRG1
RSL24D1
PNPO
SCRIB
TOMM22
NIPBL
DISP1
FIP1L1
INVS
ERP44
OSGEPL1
H4C11
GOSR2
MANBAL
SPATA5L1
GATM
SMIM26
PRORP
PPP2R3C
SPATA6L
PLPP6
GPR137
NOP2
TMEM30A
ZBTB4
RXYLT1
POLR2A
EIF3H
MPDU1
LOC100996842
KLHL9
SNRPD1
PRPF18
TPD52L2
NCBP2AS2
NCBP2
ZNF35
NFKBIZ
CACNG8
NBPF1
TTLL12
ABRAXAS1
DTD1
SLF1
KIAA0825
CCNL1
CALM1
SLC35C2
TRAPPC10
SRBD1
FUBP3
EFR3A
ZCCHC7
SRSF2
MFSD11
DCUN1D5
HIPK1
CCN2
NOTCH2
DDX18
TPRKB
PRDX1
ZNF562
WDR4
MFSD14A
MCL1
EIF4A3
RARS1
NCAPD2
MRPL51
ETV5
GLO1
PSMC2
JPT1
CBLL1
EBAG9
APTX
RPS27
POC5
SLC30A6
ARID4A
SLC9A1
EFHC1
MTAP
CHIC2
H2BC18
RPS6
DDX21
JOSD2
BBS10
TARS3
ARHGAP29
TRAM2
RHOB
GOLPH3
CAST
RREB1
DIS3L2
CLTA
LCORL
LRRFIP2
PROSER1
NHLRC3
RMDN2
POLR2J3
KMT2A
PCDH9
KAT6A
EIF4A1
ADAR
KIAA0100
TUT7
DPM3
TANK
TM2D3
KIF23
HP1BP3
STAU1
DDX19A
CMC1
ADPGK
POLR2M
CCDC14
POLR1B
S100A10
GLI4
LMNA
SARAF
PRPF3
RAD23A
APMAP
VPS36
PHGDH
TTC23L
PIGC
ATAD2
SLC3A2
FOS
STYXL1
MDH2
CEP350
ZSCAN12
UAP1
C6orf89
MAPKAP1
HERPUD1
CLCC1
ETV4
ZNF580
LATS1
ZNF101
C15orf61
STK17A
WTAP
SOD2
RPL41
GGPS1
ARID4B
ZNF197
CCDC22
ZNF669
SEC31A
MAT2A
DBNL
CTR9
SSNA1
IMPACT
H2BC21
H2AC21
H2AC20
ANAPC2
UGGT2
SPTAN1
ELAVL1
LRRC37A3
DYNC1LI1
C21orf91
PCIF1
NXF1
ZNF326
TSSK6
NDUFA13
EIF4G2
XBP1
PPIF
NBPF15
SPDL1
DCBLD2
ANO10
ABHD5
VPS53
UBLCP1
TSPOAP1
MRPL54
GADD45A
APBA3
UBE2S
RPLP1
IPO7
PSMD3
WDR48
WDR43
TMEM50B
SCN11A
RPL6
PERP
MAN1A2
CDC42BPA
GEMIN2
ARL6IP1
AKAP13
TMX4
PABPC4
H3C15
H3C14
ELMOD2
ZNF768
SDCCAG8
FAM133B
CEP170
WDR37
PGAM5
IDI1
ASPH
ZNF697
HNRNPAB
AHR
HEATR6
SEC61G
SSRP1
SNAPC3
GMFB
RHOT2
JAK1
CCZ1B
FBXL2
CCN1
PCBD2
LYPLA2
TMEM230
TMEM129
TACC3
PLSCR4
AZIN1
ARMC1
TXNDC11
SLC35D1
MYCBP2
H3C13
GIGYF2
CUL1
APEH
TMEM43
NEPRO
LCMT2
JOSD1
CHCHD4
ADAL
RBM43
CCZ1
RHOU
AKIRIN2
NFKB1
ITGB1BP1
CPSF3
UTP23
MAP3K20
EBNA1BP2
CFAP57
AKT3
SMURF1
PSMA5
INTS6
SPG11
EFTUD2
DIAPH1
CCDC103
MKLN1
ZSCAN25
SLC37A3
DHPS
PSEN2
CLN5
STXBP3
CTNNAL1
CNOT6
ZBTB26
YRDC
QRICH1
PARP11
MKRN1
C1orf122
ZBTB21
NAA50
EIF1
ATP6V1A
TPRA1
CDC25A
ZNF148
STRIP1
MINPP1
YBX1
KLF6
H4C12
DESI2
MORC3
GATAD1
DPM2
PPP1CC
PPAN-P2RY11
PPAN
PIAS1
MOV10
SYNCRIP
PARP1
HSPBP1
ZNF143
SLC30A5
RBM34
NDFIP2
ENPP4
CLIC5
WDR27
SLTM
SLC25A32
SAV1
MAP4K3
INTS2
DCAF13
C6orf120
TCHP
PDE6D
PARP2
KLHL25
EIF3A
ABL1
TLE4
OSER1
MIB1
CDK17
TRIM4
HNRNPU
TTLL11
SENP6
LPIN1
EP300
ACSL3
ZBTB37
TMEM267
SELENOT
FPGS
COX20
YWHAG
TRIM24
CLPTM1
BICD1
TBC1D4
NECTIN3
YWHAZ
UACA
SLC52A2
FBXL6
CSKMT
C11orf98
BORCS5
AP2B1
UBAP2L
SLC38A2
SCO1
C1orf43
ADPRM
RMC1
KHDRBS1
C8orf82
ZNFX1
ZCWPW2
TTPAL
SDHAF2
POC1B-GALNT4
POC1B
MIA3
DDX59
CPSF7
C7orf26
AZI2
ZNF341
RAB14
PCNX2
MCM3
GSN
DIS3
COMT
YWHAB
NEK9
HERC4
PPIA
MTHFS
ATP2A2
SUGP1
SMC4
SERPINI1
PDXDC1
PDCD10
MAU2
CCDC74A
ACTR2
TMPPE
GLB1
EPB41
CAAP1
ANP32E
ZNF3
IER5
SAXO2
GSK3B
GADD45GIP1
FAM149B1
EFL1
ECD
DNAJA1
TLK1
THOC3
NDFIP1
DDX27
RBM33
RB1CC1
PTK2
DNAH14
ATR
UBA3
RBM17
KLF5
CYSTM1
BTBD1
TBX15
POGZ
GBA
CCDC85B
PDE4DIP
LBR
B3GALNT2
H1-5
BIRC6
ZNF445
YKT6
SUV39H2
SCAI
RNF135
NT5C2
IARS2
RAB7A
CLASP2
ZFAND5
TIMMDC1
SDAD1
PAFAH1B2
GTF2H3
ENAH
EIF2B1
MRPL24
LAMA3
CD47
BACH1