ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CDK12 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◣ CDK12: Average

◢ SRX5975300: 143B

◢ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

MAMDC2
STX16
MTBP
MRPL13
ZBTB45
SLC27A5
MRPL21
IGHMBP2
DMAP1
DPY19L4
UBE3B
KCTD10
SUPT7L
SLC4A1AP
MRPL44
ITGB3BP
EFCAB7
USP30
FAM207A
MED23
INTS12
GSTCD
NME1
NDUFS7
VPS13B
RPS7
TOP3B
WDR97
MAF1
CYC1
PEX3
ADAT2
TARS2
TM9SF1
IPO4
SF3A3
WDR24
STUB1
JMJD8
DCP1A
DUS1L
NDUFB3
FAM126B
GOLGA3
REXO4
ADAMTS13
AAR2
SNAP47
JMJD4
CCAR2
C8orf58
CDK5RAP1
TMEM41A
NDUFS3
KBTBD4
FAM180B
PDE6D
COPS7B
SUGCT
MPLKIP
GTF3C3
C2orf66
TRIP4
PCLAF
BRF2
WDR83OS
WDR83
MAN2B1
STX18
RFXANK
BORCS8-MEF2B
BORCS8
SMG8
FRA10AC1
BMS1
ISY1-RAB43
ISY1
ALKBH3
ZNF296
GEMIN7
GALK2
COPS2
MRPL40
HIRA
ZNF408
ARHGAP1
MAIP1
WDR74
STX5
TACO1
DCAF10
MRPS31
PRRG2
NOSIP
TMED9
B4GALT7
PIH1D2
NKAPD1
HMGB1
MLEC
RAD54L2
VPS52
RPS18
B3GALT4
TMEM262
EIF1AD
CST6
BANF1
NUF2
USPL1
TMEM242
STMN3
RTEL1
MAN2C1
TTC4
TBC1D19
RBBP5
DUX4
WDR36
GFM2
TMEM222
ZER1
SLC24A1
NSFL1C
DSTYK
CCDC97
SLC33A1
MRPL30
MITD1
FAM228B
TATDN3
NSL1
MTERF4
ZNF165
OR1F12
COMMD2
TOR1AIP2
TOR1AIP1
UTP3
DRG2
TP53I3
SF3B6
ZNF391
SLC35A3
POLD1
NR1H2
SEC13
RTTN
MRPL3
ZNF791
ZNF490
MBTPS2
NOL8
CENPP
EIF3F
TEFM
METTL9
MKRN2OS
MKRN2
WNK4
VPS25
RPS5
AURKAIP1
ZDHHC6
VTI1A
TUT1
MTA2
LSG1
SSBP1
FAM227B
DTWD1
GTF3C5
NOL12
GTF2H2C_2
GTF2H2C
PSMF1
ZNF207
C17orf75
RPL37
CARD6
NOXA1
YIPF2
TIMM29
TRUB2
COQ4
TNPO3
KLHL20
GTF2H2
MRPS18C
HELQ
FAM98B
TMEM101
SLC39A3
ZMPSTE24
SLC44A1
CPPED1
NMNAT1
LZIC
WDR31
BSPRY
ACSF3
BBS1
PPIP5K2
CCDC57
ZNF770
WBP1
INO80B
TMCO2
MNAT1
SMG7
SEC22B
RUVBL1
EEFSEC
MRPL1
ALG10B
MTMR9
EDC4
FEM1B
SCAND1
WDR11
NR1H3
ACP2
SLC39A13
OTUD7B
C11orf49
TMA16
GTPBP3
ANO8
PLEKHM3
NOP16
HIGD2A
UBA5
ACAD11
COX16
ZNF581
ZNF580
SAR1B
AQR
ZNF276
VPS9D1
SELENOH
SNRPD3
GUCD1
RNF6
RRP15
KCTD5
YJU2
MRPL16
TVP23B
TDG
C12orf73
DDX1
TSPAN10
NPLOC4
NUP54
PSMG3
STOML2
PIGO
FAM214B
PCID2
CUL4A
POLR3B
HNRNPA1L2
EIF2D
MRPL48
NDUFC2-KCTD14
NDUFC2
C18orf21
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HEMK1
C3orf18
TIGD1
EIF4E2
KIF5C
INTS5
GANAB
ZSCAN22
HUS1
TTC26
NKAP
JRK
SLC39A4
CPSF1
RPL29
DNAJC25-GNG10
DNAJC25
PEMT
ANAPC5
SENP1
PFKM
PHB2
PSD
FBXL15
MRPL58
CSTF2T
MTOR
RBM28
METTL15
KIF18A
EXD2
STPG3
NUPR2
NELFB
FAM166A
CHCHD2
PDCD6
SPSB3
NUBP2
NME3
MRPS34
EME2
AGK
NUP107
PUS10
PEX13
MUC3A
DHX33
PIGL
NCOR1
FBXO22
CCDC106
YBEY
MCM3AP
MTIF2
CGGBP1
LTN1
ALG10
THEM4
RAB18
SEC11A
ZNF623
TBC1D13
LOC102724770
DGCR6
NUDCD3
C10orf88
VPS45
MTRNR2L8
GMEB2
C3orf38
FRG2C
MTRNR2L2
MSH3
DHFR
PPIL3
NIF3L1
SLC25A53
FAM199X
MEIG1
DCLRE1C
TMEM69
GPBP1L1
NXT2
PTPN21
BLOC1S6
EAPP
CCNC
STARD3
PPP1R1B
TRDMT1
ZNF205
TEX38
ATPAF1
MRPL39
ERI1
VARS2
GTF2H4
LRRC49
RGS14
LMAN2
THAP10
HDAC8
MPHOSPH10
MCEE
CFAP298-TCP10L
CFAP298
SNRPB
KRR1
TMEM68
TGS1
CYREN
ANKRD40
GRPEL2
SEC16B
PDCD6IP
TAF12
COQ3
LAS1L
COA6
PHKA2
CCDC200
MKRN3
TIMM9
KIAA0586
TXN2
ZBTB11
RPL24
WDR25
WARS1
PPIL1
C6orf89
TSPO
MCAT
METRN
HAGHL
CCDC78
ANTKMT
ZKSCAN8
GPAA1
EXOSC4
ZNF668
ZNF646
COL23A1
ZBTB33
PCYT1A
TEDC1
CRIP1
DNAJC24
DCDC1
NFKBIL1
DDX39B
ATP6V1G2
PRSS27
RAG2
PLD4
IFTAP
TRIM48
SPAG8
HINT2
FBXW8
BCAT2
PSMC2
DNAJC2
TIGD6
HMGXB3
CLK3
AFAP1
MED18
GSTT2B
DDTL
DDT
ACBD6
MTRNR2L1
POLDIP3
FAM118A
COPS4
PDCD2
GABPA
ATP5PF
FRG2
PTPRN2
SNRNP200
MTRF1
ZC3HC1
RGPD2
RGPD1
RPS4Y1
ZNF579
MTR
AGO3
KIF22
UQCC1
OPA1
OGFOD2
ARL6IP4
ZNF561
GSTT2
ADPRHL1
TEX9
RFX7
MRPS22
TYW1B
TUBGCP3
MFAP3
FAM114A2
USP21
UFC1
TMEM107
LSM5
AVL9
PARP16
ZSCAN10
SREK1IP1
CWC27
C8orf33
TSSC4
BANP
VWA8
RPS20
ZNF596
ZNF564
PDXK
NSUN4
LIG4
ABHD13
CARD8
TXNDC9
EIF5B
DPP9
MST1
SEPTIN4
MTMR4
NUDT5
CDC123
EMC4
SLC25A21
SRP19
FBXW11
DLST
IPPK
SDHAF3
PPID
TYW1
SBDS
ZNF195
PMF1-BGLAP
PMF1
GFM1
ZNF558
TDP2
ACOT13
RFC4
ZNF461
ZNF622
ZNF570
ZNF569
ZNF696
ZNF846
MTRNR2L9
ERCC6L2
ZSCAN9
NEU3
NUP153
TMEM199
SEBOX
POLDIP2
DPH7
NGB
NAA20
YIPF3
TMEM128
POLR1C
LRRC73
PTPRM
CDC16
SH2B1
MTHFD2L
RNF39
PPP1R11
POLR1H
PTPN6
C12orf57
PRR35
PIGQ
NHLRC4
FBXO28
C1orf198
SNX16
SLC22A18
CDKN1C
ECHDC1
VIM
UBIAD1
RSPH3
ABCB9
TUFM
MRPL53
MOGS
LRRC58
FAM168A
SIRT4
SMIM19
SLC20A2
UNC50
COA5
MTG1
USE1
NOTCH2NLC
LSM10
CLOCK
STMP1
C16orf46
NVL
ATG5
KNSTRN
H2AX
DPAGT1
PRKAB1
DNAJB12
LRRC8A
KYAT1
ZNF549
VPS26C
ZNF410
METTL6
EAF1
ZKSCAN4
NKAPL
NFIB
SRSF7
CCDC152
NUDT4B
NUDT4
C2CD2L
ACSL3
FBXW2
EXOSC3
PSMD6
FKBP3
FANCM
CSTF2
NOTCH2NLB
NOTCH2NLA
SLC35B2
HSP90AB1
ARL4D
MMP8
TTC14
C4orf3
MARK3
OPRL1
EIF3D
NDUFA12
MAGEF1
CNPY3
SDR39U1
WDPCP
MDH1
STK3
SIT1
RPL27A
VIPAS39
AHSA1
MAP2K5
SPCS1
GLT8D1
H4C14
H3C15
H3C14
H2AC19
H2AC18
MVB12A
PYURF
PIGY
HERC3
CD68
SPATC1L
VAMP2
C8orf76
H4C15
GAS8
PSME3
BECN1
ZNF302
PUM3
ALDH3A2
SUGT1
PSMD11
SAMD1
MISP3
C19orf67
TM9SF3
NDRG1
RSL24D1
PNPO
SPAAR
HRCT1
SCRIB
MPDU1
LOC100996842
CAP1
TOMM22
NIPBL
KIF2C
RAD23A
CALR
DISP1
FIP1L1
INVS
ERP44
OSGEPL1
H4C12
H4C11
H2BC14
H2AC14
GOSR2
MANBAL
ADAMTS9
SPATA5L1
GORASP2
GATM
SMIM26
PRORP
PPP2R3C
SPATA6L
PLPP6
GPR137
NOP2
TMEM30A
ZBTB4
SLC35G6
RXYLT1
POLR2A
PER1
EIF3H
SOX15
KLHL9
SNRPD1
PRPF18
TPD52L2
ABHD16B
NCBP2AS2
NCBP2
EMILIN2
EHD2
ZNF35
NFKBIZ
PCDH9
CACNG8
NBPF1
TTLL12
ABRAXAS1
OSGIN1
DTD1
SLF1
KIAA0825
LINGO1
CCNL1
ZNF285
CALM1
GNG14
SLC35C2
TRAPPC10
CLCC1
VPS36
SRBD1
CKAP2
RPS2
RNF151
FUBP3
EFR3A
SELENOK
ACTR8
ZCCHC7
SRSF2
MFSD11
DCUN1D5
HIPK1
CCN2
NOTCH2
DDX18
ATF6
TPRKB
PRDX1
ZNF562
WDR4
MFSD14A
MCL1
EIF4A3
RARS1
NCAPD2
MRPL51
ETV5
GLO1
JPT1
CBLL1
EBAG9
APTX
RPS27
RAB13
POC5
SLC30A6
DBF4B
TBX15
ARID4A
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
RPLP1
LYSMD1
SLC9A1
EFHC1
MTAP
CHIC2
CCDC38
AMDHD1
H3C13
H2BC18
RPS6
DDX21
JOSD2
ASPDH
LYPLA2
GALE
BBS10
TARS3
ARHGAP29
TRAM2
RHOB
GOLPH3
CCL3
CAST
RREB1
DIS3L2
CLTA
RGS19
LKAAEAR1
LCORL
LRRFIP2
PROSER1
NHLRC3
RMDN2
POLR2J3
KMT2A
GOLGA6L10
SYNGAP1
CUTA
KAT6A
EIF4A1
ADAR
KIAA0100
TUT7
STAT1
SLC50A1
DPM3
TANK
TM2D3
KIF23
HP1BP3
PLEC
STAU1
DDX19A
CMC1
ADPGK
POLR2M
CCDC14
POLR1B
S100A10
GLI4
LMNA
TLCD5
HSPBP1
BRSK1
SARAF
PRPF3
ZNF229
CCDC107
ARHGEF39
APMAP
CACNB2
PHGDH
ZC3H10
YY1
RPL41
TTC23L
PIGC
C1orf105
ATAD2
SLC3A2
FOS
STYXL1
RCC1
MDH2
CEP350
ZSCAN12
UAP1
GOLGA6L9
MAPKAP1
HERPUD1
SMARCC1
ETV4
PDE4D
LATS1
INTS9
HMBOX1
ZBTB6
RC3H2
ZNF101
GABARAP
ELP5
CTDNEP1
C15orf61
ATP13A1
STK17A
ZNF669
WTAP
SOD2
MRM1
GGPS1
DHRS11
ARID4B
ZNF197
CCDC22
CACNA1F
THAP9
SEC31A
MAT2A
DBNL
CTR9
ZBTB40
SSNA1
IMPACT
H2BC21
H2AC21
H2AC20
ANAPC2
UGGT2
SPTAN1
FOLR1
ELAVL1
LRRC37A3
DYNC1LI1
C21orf91
PCIF1
NXF1
ZNF326
TSSK6
NDUFA13
KRTAP29-1
KRTAP17-1
KRTAP16-1
EIF4G2
XBP1
PPIF
NBPF15
SPDL1
JOSD1
GTPBP1
DCBLD2
RNF10
COQ5
ANO10
ABHD5
VPS53
UBLCP1
TSPOAP1
MRPL54
GADD45A
APBA3
UBE2S
IPO7
PSMD3
WDR48
WDR43
TMEM50B
SCN11A
RPL6
PTPN11
PERP
MAN1A2
CDC42BPA
GEMIN2
ARL6IP1
PDE4DIP
AKAP13
TMX4
PABPC4
ELMOD2
ZNF768
ZNF747
SDCCAG8
FAM133B
CEP170
WDR37
PGAM5
IDI1
ASPH
ZNF697
MDM4
HNRNPAB
AHR
HEATR6
SEC61G
MED1
CDK12
SSRP1
SNAPC3
P2RX3
GMFB
RHOT2
RHBDL1
JAK1
CCZ1B
UNC45B
NLE1
FBXL2
DDAH1
CCN1
TMEM167B
TMEM129
TACC3
SLBP
RPL26
PCBD2
KRBA2
TMEM230
PCNA