ChIP-Atlas: Target genes

Potential target genes for PAF1

Query protein: PAF1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9237235 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
PAF1's Target genes

◢ PAF1: Average

◢ SRX119635: A549

◢ SRX119636: A549

◢ SRX15203430: Acute lymphoid leukemia

◢ SRX728785: CCRF-CEM

◢ SRX728786: CCRF-CEM

◢ SRX13834087: DLD-1

◢ SRX13834090: DLD-1

◢ SRX13834093: DLD-1

◢ SRX13834097: DLD-1

◢ SRX15147176: DLD-1

◢ SRX15147177: DLD-1

◢ SRX15147178: DLD-1

◢ SRX15147179: DLD-1

◢ SRX15147183: DLD-1

◢ SRX15147184: DLD-1

◢ SRX15147185: DLD-1

◢ SRX15147186: DLD-1

◢ SRX17152981: DLD-1

◢ SRX17152982: DLD-1

◢ SRX17152983: DLD-1

◢ SRX18207789: DLD-1

◢ SRX18207792: DLD-1

◢ SRX22001219: DLD-1

◢ SRX22001220: DLD-1

◢ SRX22001221: DLD-1

◢ SRX22001222: DLD-1

◢ SRX22001223: DLD-1

◢ SRX22001224: DLD-1

◢ SRX22001227: DLD-1

◢ SRX22001228: DLD-1

◢ SRX22001229: DLD-1

◢ SRX22001230: DLD-1

◢ SRX22001231: DLD-1

◢ SRX22001232: DLD-1

◢ SRX22001297: DLD-1

◢ SRX22001298: DLD-1

◢ SRX1078876: HCT 116

◢ SRX18207806: HCT 116

◢ SRX18207809: HCT 116

◢ SRX2731314: HCT 116

◢ SRX2731315: HCT 116

◢ SRX2731316: HCT 116

◢ SRX3151495: HCT 116

◢ SRX2635788: Hep G2

◢ SRX2635789: Hep G2

◢ SRX3010096: hESC H1

◢ SRX3010097: hESC H1

◣ SRX9237235: K-562

◢ SRX9237236: K-562

◢ SRX9237237: K-562

◢ SRX9237238: K-562

◢ SRX11380016: LNCAP

◢ SRX11380017: LNCAP

◢ SRX11380018: LNCAP

◢ SRX11380019: LNCAP

◢ SRX11380020: LNCAP

◢ SRX11380021: LNCAP

◢ SRX11380022: LNCAP

◢ SRX11380023: LNCAP

◢ SRX11380024: LNCAP

◢ SRX11380025: LNCAP

◢ SRX11380026: LNCAP

◢ SRX11380027: LNCAP

◢ SRX11380028: LNCAP

◢ SRX11380029: LNCAP

◢ SRX11380030: LNCAP

◢ SRX11380031: LNCAP

◢ SRX11380032: LNCAP

◢ SRX11380033: LNCAP

◢ SRX11380034: LNCAP

◢ SRX11380035: LNCAP

◢ SRX6386805: LNCAP

◢ SRX6386806: LNCAP

◢ SRX6386807: LNCAP

◢ SRX6386808: LNCAP

◢ SRX6386809: LNCAP

◢ SRX20928345: MM.1S

◢ SRX13440059: MOLM-13

◢ SRX12416063: MV-4-11

◢ SRX12416064: MV-4-11

◢ SRX15213658: RS4-11

◢ SRX15213659: RS4-11

◢ SRX15213653: SEM

◢ SRX15213655: SEM

◢ SRX15213688: SEM

◢ SRX15213690: SEM

◢ SRX1873455: SEM

◢ SRX19246508: SYO-1

◢ SRX19246529: SYO-1

◢ SRX19246536: SYO-1

◢ SRX19246545: SYO-1

◢ SRX728762: THP-1

◢ SRX728768: THP-1

◢ SRX728777: THP-1

◢ SRX7213063: U2OS

◢ SRX7213064: U2OS

◢ SRX7213065: U2OS

◢ SRX7213066: U2OS

◢ SRX7213067: U2OS

◢ SRX7213076: U2OS

◢ SRX7213077: U2OS

◢ SRX7213078: U2OS

◢ SRX7213079: U2OS

◢ SRX7213080: U2OS

◢ SRX7213081: U2OS

◢ SRX7213082: U2OS

◢ SRX7213083: U2OS

◢ PAF1: STRING

CCDC200
CDCA3
WDR74
FEM1A
PANK4
TSNAXIP1
RANBP10
H4C11
H3C2
H2BC18
H3C13
H4C3
IFRD2
H4C12
ST3GAL2
SCAMP3
PRKRIP1
AKAP8
NUDCD1
AHCYL2
NRAS
DDAH2
SIRT4
EGR1
H2BC11
H2AC11
AP2S1
DNAJC9
H1-2
ADARB1
MOV10
GAGE2A
PAFAH2
NAT10
SUMF2
BOD1
SLC35A2
H2BU1
H2AW
GTF2H4
H3C15
H3C14
H2AC19
H2AC18
BAG6
APOM
H2BC21
H2AC20
H2AC21
DYNC1I2
SNAPC5
VWA7
PRKAG1
FAM83E
TTC33
TSPOAP1
BSCL2
DDX23
PRRT2
KRBA2
POLDIP3
DHPS
CHMP4B
H2BC5
H1-4
RIT1
FLOT2
ABCF3
COX20
WDPCP
MDH1
INTS9
HMBOX1
DNTTIP2
CUL7
CHMP2A
TMEM191C
SF3A3
H4C14
CD68
TIMM13
SLC35E3
CLPB
GSPT1
MMACHC
TFPT
PRPF31
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FAM53C
CDC25C
H4C5
NOP2
C19orf53
H2BC8
H2AC8
VPS28
CASP6
PHF12
SELENOH
PSMG1
C18orf32
KBTBD7
FIS1
TSPAN31
H2AX
PRCC
COA3
CNTD1
CD2BP2
ZSCAN31
WDR1
SLC35E2A
PSMB10
TLCD1
ZNF446
H4C15
RCCD1
FUT11
GPN2
PHF19
GOLGA3
DNAJB14
GAGE7
GAGE5
GAGE4
GAGE2B
GAGE12I
CCDC138
H2BC15
H2AC15
RCOR3
FDX2
DNAJB12
MAML1
BANP
UNK
CHEK1
CDH24
POLR3E
NXF1
SCNM1
LYSMD1
GABARAP
MEMO1
PAXBP1
H2BC17
H2AC17
TEDC2
MIS18A
PEMT
POLB
RBM4
E2F3
H4C4
TMED1
TIMM21
FBXO15
LZTR1
C11orf91
H4C8
GANAB
TMEM101
MED15
SCFD1
VPS50
HEPACAM2
RBL1
SPATC1L
MSH4
UFD1
CDC45
VEZF1
ZBTB4
POLR2A
NBEAL2
DNASE2
EDC4
ZC3H10
KLF6
ACOX3
SNX14
LUC7L2
FMC1-LUC7L2
FMC1
USP21
PHLDA1
SCRIB
PCBP2
DYRK1B
H2BC4
H2AC6
SECISBP2
RPP21
RHOBTB3
ZSWIM9
LIG1
FAM131A
EIF4A1
ACTB
IMPDH2
UFSP1
SYCE2
CTNNAL1
DNAJB2
TMC4
H2BC12
H2AC12
TUBA1B
TMEM230
KBTBD6
NEU1
SRSF3
EPN1
HNRNPA2B1
CBX3
TLCD2
HMGA1
ZC3H4
FAM156B
FAM156A
LYPLA2
TARBP2
CALR3
C19orf44
GABPB2
HNRNPH1
PMF1-BGLAP
PMF1
POMZP3
FBXO22
ZNF587
POM121C
TUBA1C
MFSD3
PPRC1
SRA1
MRPL40
HIRA
TMEM11
TMEM143
PRKCI
TMEM191B
THOC6
HCFC1R1
ATF4
POLR2J3
MAPK8IP3
LRCH3
MDM4
MAPKBP1
DGCR8
PHF1
PIP4K2B
ZNF76
PMM1
SCN9A
DVL2
RABIF
PRMT5
PPP1R10
MRPS18B
GTF3C6
ATAT1
AJUBA
WNK4
EIF1
TSSC4
MRPL24
RPS9
TCEA2
SSBP2
ZNF444
AGO3
GATB
ARRDC3
PRR7
EEF1AKMT1
GRWD1
ADAT1
CHMP4A
USP17L17
MPV17
ZNF35
CCDC90B
PHKG2
NUCKS1
OSTC
ZNF343
MARCHF2
C12orf57
SCG5
ADNP
H2AC16
ZC3H6
MRM1
EIF4EBP3
SRSF6
SRRT
RILP
USE1
INVS
ERP44
KDM3A
PRPSAP1
GP1BB
SETD1A
MAN2C1
VCPIP1
C8orf44-SGK3
CCDC24
CALM2
LRP2BP
ANKRD37
USP48
UBXN8
GATD3B
GATD3A
SIX5
PSMC3IP
MARCHF7
TGIF1
SURF6
KMT2E
LDLR
NQO1
TFR2
PYGO2
LOC101928120
NEU3
SERINC4
HYPK
FADS2
FADS1
NDUFB2
CCDC146
B4GALT2
HAX1
HSD17B8
H3C4
H2BC7
H2AC7
PPP1R35
NPRL2
CYB561D2
MRPL53
TACO1
MTFR2
TMEM223
SLC35B1
MRPL16
EBAG9
HERC1
TRIM41
CTXN1
POU2F1
KIAA1586
FUS
BRD2
JMJD7-PLA2G4B
JMJD7
CRTC2
UPF3A
COX18
CAP1
GMIP
MRPS16
EEF1A1
ZCCHC4
STK19
DXO
H4C2
JUNB
PRAME
CHD8
TMEM120A
EFCAB2
TXN2
TAL1
ZNF451
VARS2
GCN1
CDC6
MST1
LCORL
POLG2
PPIA
B3GAT3
BAZ2A
GSTA4
ZNF24
NAT14
ZNHIT2
MCCD1
PNPLA6
LRIF1
SARNP
ORMDL2
NOLC1
MUC1
GZMM
STX16
KTI12
DNAJB4
FBXW11
FBXW9
RAD23A
CCDC97
FTL
PIP5KL1
HBG2
NFYC
CCNI
TAF1D
C11orf54
ZBTB37
UBE2D3
H2BC13
H2AC13
TRIM37
GTF2IRD2
C7orf25
GTF2IRD2B
HBQ1
TMEM209
PNMT
MAP1LC3B2
EGFL7
DDX21
DERL1
IL10RB
ZNF34
C8orf37
NDUFS3
KBTBD4
FANCG
VPS39
RCC1
GPSM3
RABGEF1
SREK1
TOR3A
CDK11B
CDK11A
TTI2
TRA2B
ZNF77
SOCS2
GPKOW
PACS1
STRADA
PSMA6
CFAP206
HNRNPF
SCO2
PHTF1
NUCB2
MXD1
GADD45A
XXYLT1
POLR2J
PPP1R12C
RHBDL1
AGBL2
MICOS13
HSD11B1L
SLC3A2
MFSD11
SRSF2
ZBTB25
ZBTB1
GTF2A2
KPTN
DDX3X
ATXN7L2
SMG9
KPNA2
RNF32
YES1
C5orf24
LAMTOR3
FAM185A
APTX
PPOX
RBM3
ZNF720
SH2B1
CRPPA
PABPN1
SRSF7
P4HA1
RPL10
CTDP1
H1-3
RNF225
CNOT8
SMC1A
RIBC1
SP3
PPFIA4
PPP1R37
SLC22A4
EIF2D
ANKRD13D
BCLAF1
RIPOR3
SLC13A3
GPR137
TRMT112
PRDX5
REXO2
MAN2A2
BAG2
OGG1
C1orf159
THAP3
PPIL2
MTRF1L
PAQR4
EXOG
SRSF5
EHMT1
NAXE
INO80C
CSNK1G1
H1-5
ADGRL1
ROGDI
DDX5
COPS7B
TOP3B
ACYP2
ELMO3
PDE6D
TUSC2
TSFM
RAB33B
NASP
ZNF8
ZNF888
TANGO2
INPP5K
ATP5MC3
NFE2L2
TOM1
PDCD6
LMNB1
POLK
CERT1
ZNF692
PAF1
MED29
ING3
CHMP3
SIRT5
ZKSCAN3
MAPK1
ZKSCAN2
HSP90AB1
GINS3
HSPA8
MTF1
TXLNA
CCNL1
KMT2D
ECI1
MRPL23
HMMR
NUDCD2
COPS4
HBP1
PDCD6IP
SMG7
SLC27A4
C9orf16
DERL3
MTRNR2L8
SLC39A13
SMARCD2
H4C1
H3C1
MTRNR2L2
FLOT1
INTS10
KANSL3
ZNF609
USP3
E2F6
SYT7
H4C9
C6orf226
IER3
YIPF4
EPS15
DCP1A
EXOSC6
AMDHD2
NPAS4
SYNRG
PPP6R1
LAMP1
WASHC2C
H3C7
H2BS1
H3C10
WWOX
H4-16
SNX16
DHRS11
WASHC2A
KDSR
ZNF653
FUT10
ZNF513
KCNJ4
SIRT7
CASZ1
H3C11
DDX59
INPP5E
B3GALT4
DONSON
TJP3
EIF4A2
ABCA7
CYRIB
ATG14
CIRBP
H4C13
CCAR2
H3C3
H3-2
SUPT4H1
TMSB10
TRAPPC9
H2AC4
ZMIZ1
SLX4IP
MTX1
CITED2
SLC38A2
H3C12
NOTCH2NLC
INO80D
HEXIM1
NOTCH2NLB
NOTCH2NLA
ZC3H3
SUMF1
TTLL3
RGL2
ID1
ST3GAL3
GTF3C3
PDF
DIDO1
ALKBH3
NANOS1
WDR11
GCLC
ACSF3
DAPK3
H3C8
H2BC9
NDST2
CAPS2
KLF7
ARID1A
ULK3
SPNS1
MRPL28
CD320
CSKMT
C11orf98
H2BC14
H2AC14
C17orf75
C7orf26
LENG9
ENOSF1
PSEN1
SNRPB2
USP30
FRA10AC1
CCDC85B
FAF2
PNMA1
UBC
LNPEP
NPM3
SETD5
ZNF410
GSTO2
COX16
HEXIM2
DPP9
SLC25A26
MED23
TMEM222
NKIRAS1
MRPS31
RNF220
NAGPA
GRAMD2A
DDIT4
SETD6
RNF114
ANKRD12
TRNAU1AP
VTI1B
MAT2A
MYG1
FOXK1
MTHFD2
PDE8A
MIER1
NPM1
ACIN1
HMCES
RUVBL1
TMBIM4
MATR3
HNRNPA3
SCAMP1
CELSR3
TRDMT1
IMPA1
CFAP410
SGMS1
JMJD1C
TUBB
TAF10
WWP1
RPL41
CFAP53
SLC39A10
GLE1
MRPS28
FAM174C
CPSF1
CXorf38
MFAP3L
LRRC37A3
TPM1
ROMO1
DYNLRB1
HMGB1
GTF2H2
PLPP5
H3-3B
COQ3
NABP1
H2BC6
AAR2
CSRNP2
MTRNR2L9
RFX1
HNRNPA1
TTC27
GGA2
TRIP4
GPX1
TRMO
PTP4A1
RCE1
OPA1
MAZ
PWP2
LOC102724159
SIPA1
ANKRD40
SRSF11
WDR24
TAF9B
EDEM1
WDR83OS
WDR83
ACTG1
TPT1
NUDT17
AREG
CCDC30
DMAP1
CBX5
MT2A
SNX19
CLDN4
RFX3
GPAM
RRP36
USPL1
FBXL5
DPY19L4
LHB
HEXA
MT1E
PLEKHM3
CCN1
RGPD2
RGPD1
FAM53B
SLC35E2B
TUBGCP6
KMT2A
DPH7
MTF2
RAD54L2
RPL3
SEC31A
ZNF217
HNRNPU
MTMR9
IARS2
UBE4A
ERRFI1
CSE1L
ING5
SLC25A51
CCDC107
DALRD3
LARS2
SFPQ
TMSB4X
SPRED2
XKR7
AIFM1
DNLZ
TSR3
GNPTG
TOPORS
SMIM27
ZNF143
PKM
ISY1-RAB43
ISY1
SLC24A1
MTIF2
TPRKB
MRPS18C
HELQ
ORAI3
ERLIN2
RALGDS
NR1D2
DPP10
ADPGK
GMPPB
PABPC1
ANP32B
C2orf42
DARS1
PARP2
SLC39A6
HSPG2
ELP2
SREBF1
MOB4
ALKBH8
ARFGAP2
ARHGEF1
POLD1
GTF2A1
KRT8
RPTOR
TMEM179B
TBK1
SSH3
MIA3
HIBCH
ECSIT
PAIP2
STMN1
WDR4
RPS7
RNF6
MAD1L1
NDUFS7
DPYSL2
RTEL1
ADK
GET4
BPNT1
MRPL44
CEMP1
TASL
COMMD2
CLTC
INTS6
FAM228B
ZNF518A
ZFAT
MRPL12
C17orf49
TULP3
PTMA
PAK2
NBN
AURKAIP1
TRIB3
MORF4L1
RHOB
HMGN2
POLR3F
DZANK1
CEP192
MTA2
CEP95
CMTR1
KAT2A
HYI
GBA
POLR3D
SNF8
WDR27
C6orf120
SRSF4
C5orf15
TRAF7
TMF1
METAP1D
SOD2
SLC25A42
SFT2D3
OVCA2
MRPL3
NUMBL
JMJD8
IPO4
SEC14L1
MMP24OS
MMP24-AS1-EDEM2
TAF2
SH3BGRL3
GALE
NUP62
IL4I1
ATF5
ZMPSTE24
MRPS15
ZAR1L
BRCA2
DUS3L
UNC5A
MDP1
GAPDH
CS
YWHAZ
EPS8
CBWD5
LATS1
MARCHF8
GPAA1
SRCAP
LOC730183
RAD52
COPB1
WDR6
CHAC1
CALM1
TMEM242
PCIF1
C1QTNF6
H4C6
GTF2H2C_2
GTF2H2C
KIF16B
EIF4G2
TRIM27
NEK9
C8orf76
KLHL11
SLC7A11
LDHA
GPS2
PA2G4
CPPED1
PRDX1
MCL1
C5orf51
CCZ1B
DNAH2
INTS12
GSTCD
IQSEC3
STYX
ATXN7
C6orf47
ZER1
INTS2
RPL6
UBB
GFUS
ZNF497
NUF2