ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX431474 | Hep 3B
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◣ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

DUX4
FRG2C
DLGAP4
TRIM15
TRIM10
SKIV2L
NELFE
NOP9
LTB4R2
LTB4R
DHRS1
CIDEB
ITGB2
SLC38A3
GNAT1
NUDCD1
CSRNP1
HAAO
ECHS1
CLYBL
RIN3
GET1-SH3BGR
GET1
CCDC90B
ISG15
HES4
FGFR3
ENTPD8
GCHFR
C15orf62
RMDN3
ZNF232
USP6
OPA3
RBIS
NOMO2
NDUFS1
EEF1B2
ERF
ATXN7
PCNX3
MAP3K11
MIA2
AGMAT
SLC17A5
TMEM177
FRG2
KNL1
ZNF219
TMEM253
NID1
PPIL2
PDXDC1
PDXP
MIA3
ALKBH7
PSPN
KIF21A
CDH2
PGK1
GDI2
TCIRG1
NDUFS8
AGT
F7
CCDC200
DIDO1
EPN1
IQANK1
FAM83H
NOMO3
ABCC6
ASS1
POLRMT
FGF22
GPR171
SLC9A3R1
DZIP1
ABAT
GALE
LYPLA2
PAK4
VTA1
NMBR
FGF19
MRGPRF
ETFA
LOC102723996
ICOSLG
KDM2A
VANGL1
TREX1
SHISA5
COQ5
RNF10
VIL1
CSTF1
AURKA
RAB1B
F10
NAPRT
MROH6
PLEKHG6
ATP11A
C1orf174
TTYH3
MYL12B
MYL12A
MEIG1
DCLRE1C
PLXNB2
UHRF1BP1L
GOLT1A
STAP2
MPND
CERK
TBX10
NUDT8
ZNF223
IL11RA
GALT
ZFAND2A
UFL1
KAT6A
LINS1
ASB7
CSNK1A1
MDM2
RAP1GAP
PAAF1
COA4
STAT5B
AMN
GPER1
TRIP10
GPR108
TXLNA
UBE2V2
TNFAIP8L1
CDIP1
SNRPD3
GUCD1
TMCO1
OSBP
SERPINF1
CCDC93
CAMSAP3
TMEM53
ARMH1
TATDN3
NSL1
INAVA
CREB3L3
ZNF367
TTI1
RPRD1B
CABLES1
ZNF408
ARHGAP1
MAD2L2
FBXO6
RABGGTB
CDKN2AIP
PPFIBP2
BIRC2
LURAP1L
PRR13
PROZ
PRR3
GNL1
CRY2
PRKCSH
CCDC151
MFSD3
GPT
SLC22A7
CD2BP2
PTPA
CRAT
FTCD-AS1
FTCD
RAB17
ASGR2
CPPED1
TMEM150B
KMT5C
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NOMO1
BCL2A1
DONSON
LRRC2
BAHD1
BRMS1
B4GAT1
TSPO2
UNC5CL
TPRG1L
CARHSP1
NRL
DCAF11
VPS54
HELZ
VHLL
TMEM79
SMG5
GLMP
OGFR
TRIL
FIS1
CLDN15
SLC30A1
TMEM169
PECR
RAB43
ZFAND2B
TANK
RAB32
PTGDR2
DYRK1B
ALDH2
CERS2
ANXA9
MLXIPL
NEU4
MMP15
LOC102724770
DGCR6
TNFRSF1A
PTBP1
SREBF1
POR
TRAF4
NME4
DECR2
C9orf64
ABLIM1
CCL25
FGD4
SEC24C
TMEM254
FGF3
JOSD2
ASPDH
NT5C3A
CTDSP1
PDE11A
TRAPPC10
DENND2B
ISOC1
HSPE1-MOB4
HSPE1
HSPD1
DCUN1D4
VAMP8
VAMP5
GAPDH
SUN2
NSUN5
CLASRP
MEAK7
IRF2BP2
SLC35D1
NPTN
NDUFA6
PIK3R2
SIRT7
NPB
PCYT2
DNMT3A
PGLYRP2
SLC25A13
CLK3
EPS8L2
DEAF1
SERPINF2
C3
G6PC
SYBU
FUOM
PRAP1
UBAP2
GGNBP2
MYO19
DMAP1
SLC50A1
EFNA1
SOS1
KDM6B
FTH1
PPP4C
PGRMC2
BACH1
HMGCS1
STAT6
ECE1
TRIP13
BRD9
CDC14B
RNF126
ADAP1
SH3BP5L
ZIC4
AKAP1
ASGR1
GSDMD
C1GALT1
UBE2J2
IST1
TNXB
SLC22A18
ATF6B
APOE
NPPA
C4BPB
AMBP
ACP4
LOC105372440
SECTM1
PRMT1
IRF3
BCL2L12
CHKA
SF3B2
GAL3ST3
MAF1
CYC1
WDR97
ZNF497
A1BG
JUNB
FOXQ1
KATNAL1
PDLIM2
MRPL24
TAOK3
SUDS3
ITPKC
COQ8B
PTGR1
GNG4
USP42
SEMA4B
PPIAL4F
PPIAL4E
PPIAL4D
RAB3IL1
TSPYL4
DSE
TNS3
RNF220
GAB2
PPP1R27
MCRIP1
RCAN1
ANXA2
LRIG2
TBCCD1
DNAJB11
CERS4
COQ2
TFR2
EDEM1
RBKS
BABAM2
METTL7B
ID1
PROS1
ARL13B
RRM2
STXBP6
SYNGR4
ELAVL3
PRR5
TEAD3
SPDYE9
SPDYE8
SPDYE15
SPDYE11
ANKS4B
GDF15
SEC16B
CHD1
ZNF213
COX20
TP53I13
ABHD15
URGCP-MRPS24
URGCP
ZNF564
TMEM262
EPHX2
PMM1
SYNCRIP
FASTKD1
POLR2H
CLCN2
MST1
TJAP1
ZBED4
FBLN1
PKP4
CCDC148
TTC31
CCDC142
ITGAE
ZSWIM1
SPATA25
NEURL2
CTSA
WFDC3
DNTTIP1
LGR6
CPT1B
SYCE3
UROC1
CHST13
CCDC42
LAX1
PKLR
FDPS
SMIM6
ELK4
SLC6A13
GMDS
UBR4
MAN2C1
ADGRG7
NIPAL1
CNGA1
AXL
RIPK4
NOS1AP
GOLPH3
NPDC1
ENTPD2
PLIN1
TNIP2
ATP1B1
CDKN1A
AP5Z1
GTF2IRD2B
VTN
SEBOX
SARM1
GPRC5C
TEX9
RFX7
YEATS4
HADHB
HADHA
GLRX
PHACTR4
FBXW5
C8G
LCN12
SRSF11
LRRC40
CCND2
EFNA2
SMARCB1
MMP24OS
MMP24-AS1-EDEM2
FAM83C
C2orf88
LRP1
GRTP1
MLF2
ORM1
ORM2
SCGB1A1
TNFRSF14
ZNF764
TMPRSS9
MIIP
GJA9
NEK4
ITIH1
COMT
GSTK1
NFE2L2
CAPN10
RIN1
HNF1A
KRTAP5-6
ZHX3
TTC38
PKDREJ
XYLB
TMEM82
SLC25A34
NDUFS7
TULP2
NUCB1
NCR3LG1
TOP1MT
MANEA
SLC9A3R2
PIH1D1
ALDH16A1
SERINC3
PKIG
SKIL
TEF
TAF11
ANKS1A
HMOX1
PABPN1
MMADHC
APOL6
CAMKK2
ERBB3
ZNF710
SLC12A9
EPHB4
NEK7
ZNF696
HIC2
SPOCK2
ZNF48
LIN54
SLC25A16
MYLPF
TBC1D10B
RTN4RL2
CBX4
YIF1A
TMEM151A
SMIM20
SLC25A42
OR10J1
ZNF516
ZNF789
ATP5MF-PTCD1
ATP5MF
DIP2C
CCL16
C1orf210
PHETA1
CCL14
GALK1
PTGR2
FAM114A1
TLR6
SLC25A4
PVRIG
HOXA4
HOXA3
IL17RC
MYRF
DENND5B
STARD7
PRM3
PRM2
PRM1
SBNO2
AGTRAP
ZFR
CD320
RAB37
HEXB
GJB1
SP1
C19orf12
PHLDB3
PDGFB
TECPR1
PLCD3
ACBD4
MARK2
SOX13
PDZK1IP1
C11orf95
ACTR6
IDNK
PUS10
PEX13
CCDC68
NIPSNAP2
CDC20
AQP11
GAMT
DAZAP1
PTK6
RARA
TMEM140
SLX1B
SLX1A
BOLA2B
BOLA2
XPC
LSM3
SULT1A4
SULT1A3
BOLA2-SMG1P6
GOLGA8B
GABPA
ATP5PF
SCAF11
ZBTB48
NUP210
VARS2
GTF2H4
SV2A
BOLA1
PRUNE1
MINDY1
IL32
CYB5R3
ATP5MGL
ZNF687
PPP1R9B
IHH
CPT2
PFDN2
NIT1
SSH3
ZNF512B
ZNF768
ZNF747
DOCK9
B2M
RNASEH2A
PRDX2
USP18
SLC12A7
HDGF
THUMPD3
LMNA
MEX3A
SMIM14
PGGHG
ZNF682
TCP1
MRPL18
IFITM5
TRMT2A
RANBP1
STK11
BCKDK
TGFBR3L
SNAPC2
CTXN1
ADPRHL1
HRK
LOC102724265
PAH
ASCL1
RNF103-CHMP3
RMND5A
SLC35A3
PINK1
CCDC71
UBA6
KLHDC8B
SH3BP2
CBWD5
CBWD3
GSDME
PXMP4
PLA2G4C
CEP43
GPX4
SLC20A1
CTSO
SLC27A3
GCA
IFIH1
DNAJC22
POLD4
CYP2J2
CYP11A1
GATA4
TK1
AIFM2
TP53I3
SF3B6
FAM228B
RPS5
ZNF468
LMNB1
SLCO2B1
SCARB1
NIPSNAP1
UMPS
PNPO
COBL
CACNB2
ZSWIM3
ACOT8
GLIPR1L1
CAPS2
USP36
CP
TESK2
MMACHC
CCDC163
OMP
EPS8
PTPN18
PPP5D1
CALM3
NRBF2
DCAF8
GDF7
CAMK2N1
PHRF1
GPR137
ART1
CDK5RAP2
RASSF7
LMNTD2
ART5
PSMD1
PCGF1
LBX2
PALM3
ADD3
PLIN4
AHSG
LOC390877
GTF2F1
GPD1
COX14
GNPAT
C1orf131
KLF7
TMEM106B
PCBD2
SCAMP5
MOGAT3
EPS15
ZNF567
GNA11
SPAAR
HRCT1
TNFSF13
MAPK6
SENP3
MCM7
AP4M1
MMP20
TACO1
C2orf42
CRPPA
B4GALT4
PIGC
C1orf105
IFNGR1
IRF2
SMIM11B
SMIM11A
KLHL5
NGEF
NAT8
CMTM8
STX18
ZFP36
PAF1
MRPS24
LHPP
ACO1
SELENBP1
SLC11A2
SLC25A10
CYB561
MRPL12
PRKAG2
LY6E
TKFC
DDB1
TMEM184A
NUAK1
ATXN7L1
FHIT
TRIM27
KMT5A
HSD17B11
ESRRA
CATSPERZ
HAMP
TOR1AIP2
TOR1AIP1
RASA4
CORO2A
PLEKHA7
PALB2
DCTN5
MPP1
C1QTNF8
CRYBG2
IL7
HEATR5A
CLMN
MRPL20
CCNL2
ITPKA
CRYBA2
H3-3B
SEL1L3
COPB2
GAL3ST2
ANK2
CYCS
ARHGEF11
IL17RB
CHDH
S100A16
S100A14
PARP4
CPQ
IGFBP4
AGXT
PPP4R3A
RUSC2
HDHD5
CDC42EP2
KDELR2
CNNM3
ZMIZ1
PHF12
SELENOP
RHOC
APOB
UQCRHL
MVP
PTP4A1
CCN2
GCLC
ORC2
AHCY
ARHGEF39
ABCD3
SIT1
CCDC107
PGAP3
ERBB2
RAPGEF1
SRCIN1
SPTBN4
ABHD14B
ABHD14A-ACY1
ABHD14A
NCS1
ACY1
RHEX
ALOX12B
SPON1
ACY3
DOK4
AP1AR
MGST2
SLC7A7
NEK2
NUMB
SMPDL3A
ACOX2
SLC35D2
SUCLA2
CNDP1
SOWAHA
FYB2
PLEKHG2
SEC13
MIDEAS
KIF1C
INCA1
BPHL
ZNF214
NLRP14
LARP1
GPR142
NR0B2
NUDC
AP1M1
AKR1A1
SLCO4A1
KANK1
RAPGEF4
PKDCC
FOXA3
TMEM125
APOC3
NR1I3
F11R
NSMCE1
RXRA
SH3GL1
AGPAT2
IGSF23
TRAF7
RAB26
LRRC1
CFB
CDK3
PANK1
TSC22D1
COLCA2
BCAR1
DOCK6
SULT2B1
SLC45A4
WEE1
SLC2A14
POLR2C
CSNK1D
MSH5
DDAH2
CLIC1
RGS3
SLC19A3
LGALS4
TCP10L
GUCA1B
FCHO2
FUT5
COL21A1
APOA1
UGDH
EPS8L3
CBSL
CBS
CLIP2
PTK2B
AJUBA
ATP7B
ALG11
LIPE
CCL20
LRRC3
TRIM14
PABPC4
DHRS3
LSM1
GATA3
CDH17
IQGAP2
FN3K
BAG4
GIMAP5
OCIAD2
PIF1
TBC1D22A
LRRC74A
MGAT1
LASP1
CA5A
CARM1
SDR9C7
CPLX2
USP2
HDHD3
IVD
SDC1
APOA4
POLR2E
LIME1
ITPRIPL2
NCOA4
ATE1
PPP2CB
COPS4
KYAT1
TRIB3
CPNE7
GSE1
MARVELD1
ZNF184
TST
MPST
SDCBP2
PDF
MYO18A
MRPL2
KLC4
CUL7
NFATC3
MTRNR2L1
PSMA5
GIPC2
PLOD1
PER2
TPT1
PERP
STK24
KLHDC2
NR1D1
PIK3R3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
PRR15L
MAN1A1
GLYCTK