ChIP-Atlas: Target genes

Potential target genes for HOXA3

Query protein: HOXA3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXA3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXA3's Target genes

◣ HOXA3: Average

◢ SRX10478483: Hep G2

◢ SRX10478484: Hep G2

◢ HOXA3: STRING

NPAS4
DHX36
PEX12
AP2B1
NOC4L
DDX51
UBA52
PRPF38A
ORC1
TBL3
RPS2
RNF151
NOXO1
CWC25
XKR7
CCDC86
IQSEC3
CAMLG
STK38L
TOR1A
RRM1
APTX
POT1
PDE4A
HINT3
KAT7
RNF166
CTU2
NBEAL1
MRM3
GLOD4
SPTY2D1
NUP153
HOMER1
PRMT9
ENOSF1
MVK
TVP23B
BRAF
SMTN
LEMD2
RRNAD1
ISG20L2
RANBP2
S100A13
S100A1
CHTOP
ZNF593
CNKSR1
C1orf232
MTURN
FANCD2
GALNT11
CSTF1
AURKA
BLOC1S5
TRIAP1
COX6A1
SF3A1
CCDC157
ZNF547
TRAPPC2B
SSU72
ZSWIM7
TTC19
RALGAPA1
ESYT2
DYNC2I1
METTL3
AIG1
RBM18
MRRF
COPS8
MAGOHB
KIF15
KIAA1143
SHLD1
PI4K2A
MORN4
VPS37B
ZNF721
PIGG
PEF1
DDX19A
MRPL55
ILRUN
CDK11B
C9orf72
USP36
NARS1
STX4
CCDC174
RTF2
TMEM91
TGFB1
B9D2
SSNA1
ANAPC2
ZBTB21
JOSD1
GTPBP1
ELL2
OGDH
PPIG
HIRIP3
SZRD1
RNF139
ING4
XRCC6
DESI1
HAUS5
ZNF268
MAP3K13
SCYL3
INSM2
MORF4L1
PRKCSH
CCDC151
UBR4
RCE1
DDX18
PTBP1
COX18
PRR14
FBRS
ZNF548
OXSR1
IDH3B
SLC30A9
DCAF4L1
ELOVL5
ZZEF1
CYB5D2
CDC5L
TM9SF4
RBKS
BABAM2
TRMT61B
RPA2
JOSD2
ASPDH
CATSPERG
MFF
MAGOH
COQ7
ATP9B
HECA
SRRD
HPS4
ESCO2
ANAPC10
ABCE1
MMADHC
TMUB2
RPS27
RAB13
COX8A
H4C12
H2BC15
H2AC15
HES4
ZBTB40
RIF1
CRADD
LIN28A
TSSC4
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
UNKL
PERCC1
C16orf91
PSTK
YTHDC1
WFDC3
DNTTIP1
ATF1
SEC23B
CCDC59
ST7L
CAPZA1
RLF
NAF1
VPS16
PCED1A
AFTPH
ZBTB11
TTLL11
RPL24
ADGRG3
VPS35L
YTHDC2
GHITM
TRMT10C
RANBP6
KIAA2026
SLC25A3
PCNX4
FAM177A1
MAP3K2
TXNDC15
OPA3
TRMO
CCNT1
AP1G1
RPL12
LRSAM1
MCMBP
GTF2H3
EIF2B1
KAT8
BCKDK
TSSK6
NDUFA13
LDAH
CDK11A
RFC1
IPPK
CSNK1G2
PPP1R11
POLR1H
CCNL1
THUMPD1
PDE7A
C1orf174
LRRC59
SF3B5
HACD2
PRRC2C
THAP4
ATG4B
RPL21
GZF1
PAK1
HTR5A
SCLT1
GUK1
GJC2
C4orf33
SEPTIN7
PARP2
CCNB1IP1
XPO6
NUP214
JARID2
NECAP1
GTF3C3
C2orf66
FAM24A
NKX1-1
KIFC1
SKIV2L
RPF2
NELFE
RFX1
TBCCD1
PRORP
PPP2R3C
DNAJB11
MYO7B
IWS1
ZNF655
FAM200A
TPT1
NUDT18
ZNF764
SIK1B
SIK1
NOLC1
FEM1A
PPIL4
GTF3C6
PGP
E4F1
AP5S1
USP31
SNU13
CSDE1
TFCP2
TPGS1
BIRC2
IMP4
CCDC115
FAM149B1
ECD
ZC3H6
PSMB5
PSMB11
RAD23A
CALR
PRPF38B
PSMD8
RAB37
ZNF426
NUP133
KDM3A
CYCS
CCDC124
PSMF1
TRIP4
PCLAF
MRPL21
IGHMBP2
SAR1B
ZNF768
ZNF747
PREPL
CAMKMT
SDF4
B3GALT6
TMEM259
CNN2
SSR4
IDH3G
SELENOK
ACTR8
BDP1
ZGRF1
LARP7
NOP58
MIGA1
STX16
WARS2
IMMP1L
ELP4
RPL9
LIAS
SRSF5
RBM42
HAT1
EFCAB2
COX7A2
BNIP1
PTPN6
C12orf57
ATN1
NUP35
NOP9
DHRS1
ATP5MC1
TUBGCP6
SPRYD4
HDAC10
NCOA5
ZNF507
CCNH
PELP1
ARRB2
CLK1
NHLRC1
SNRPD1
ECH1
AARS2
SNRPB2
N4BP1
TBP
PSMB1
ZDHHC7
KPNA5
SLC39A9
ERH
NUS1
CDK5RAP2
ELL
MZF1
TOR1AIP2
TOR1AIP1
DYNC2I2
TMEM230
PCNA
ARG2
ACTR5
ZNRD2
SLMAP
FAM89B
EHBP1L1
TUFM
SH2B1
MTF2
STAT1
ZC3H11A
ZBED6
WDR33
MFSD13A
C10orf95
TMEM101
POMZP3
MRPS10
RBM12
CPNE1
RBM25
PPP1R15B
HOOK2
THOC1
BAX
LRRC37A3
WBP1
INO80B
ATP6V0A1
SLC35F5
PRR22
DUS3L
DNTTIP2
NDUFB5
MRPL47
NDUFS2
ADAMTS4
TOMM6
PRICKLE4
FRS3
LONP1
CATSPERD
ARMC5
PXT1
KCTD20
DHDDS
SCFD1
RNF40
CCDC189
CBWD2
TBC1D17
PNKP
AKT1S1
WDR53
FBXO45
ZNF76
EIF4A1
CD68
USE1
ANGEL2
AHCYL1
LSG1
ATG16L1
ATAD3B
ZNF23
ZNF501
MRPL44
KNL1
NSFL1C
RACGAP1
GART
NDUFS5
RPRD1A
UBE2J2
TVP23C
RPL23
TEAD1
CBWD1
CHGB
LYRM1
DCUN1D3
N4BP2L2
MYBL2
MBD4
IFT122
NME1-NME2
NME1
WDR7
TRMT44
SNRPC
ACOX3
TTI1
RPRD1B
ARIH1
CMTR1
RPS7
OXA1L
PPP2CA
ENSA
CUEDC2
OR6B2
NDUFA10
THAP6
MCM10
CCDC150
ADK
ESCO1
CACYBP
RPS6KB2
PTPRCAP
CTPS2
GTPBP10
TMEM79
SMG5
CTNNB1
CDK5RAP1
STX18
HTATSF1
BRS3
C5orf15
FBXO38
RRP1B
HSF2BP
EXD2
PTPN4
NEK1
CLCN3
NCAPH2
LMF2
OTUD6B
STRAP
CELF1
ZNF514
ZNF2
DDX42
CCDC47
ARPP19
THAP9
SEC31A
TP53I3
SF3B6
FAM228B
C1D
MRPL20
CCNL2
AASDH
ERLIN2
NDC80
METTL4
LUC7L3
ZNF274
HPS5
GTF2H1
FLNA
EMD
PPP2R3B
C2CD5
NDUFS7
PURB
SECISBP2
CKS2
YTHDF3
MAP2K1
GLRA1
SETD3
LRRC57
HAUS2
CCNK
RBSN
VCPKMT
PRRT2
PAGR1
MVP
MAZ
RMDN3
GCHFR
TRAK2
STRADB
GOLPH3
CHD2
TRIM52
ZNF337
PGBD4
FBXL19
EMC7
DHX40
DCP1A
SLX4IP
MRPL2
MKKS
KLC4
CUL7
TCTE3
RNMT
FAM210A
ERMARD
FRA10AC1
NRF1
NAA60
PPP1R21
NDUFAF3
IMPDH2
ERCC5
DALRD3
ZNF26
TGM1
RABGGTA
DUS2
DPEP2NB
DDX28
TMEM131
FDXACB1
C11orf1
ALG9
TAB2
DCTN4
ABT1
LCMT1
DDX1
SRCAP
NR3C1
LOC730183
KMT2E
COMMD1
CCT4
PSKH1
PHF20
NRN1L
R3HDM2
INHBC
SMIM17
ATXN1L
INTS12
GSTCD
RPL27
IFI35
MRPL58
NDUFAF5
ESF1
SLC17A5
SARAF
MIA2
NDUFB6
MRPL4
BCAS2
MAP1LC3B
FBXO31
TUBB
MDC1
SETD4
CBR1
CNNM2
ZFX
NGDN
GARS1
RPS11
RPL13A
TBC1D15
TTC1
DUS1L
CENPW
USPL1
HMGB1
DIABLO
TTC17
RPL31
PIGU
OSBPL11
MMUT
CENPQ
TSPAN31
CDK4
AGAP2
SRSF11
LRRC40
SCAF8
OXNAD1
DPH3
CPLX2
RAF1
COQ9
CIAPIN1
FARSA
KPTN
STRIP1
SNX5
MGME1
NDUFV1
ZNF300
DLD
PINX1
ANKRD13C
RAB22A
SPG11
TRAPPC9
RAB5A
EFHB
EAPP
CCAR2
C8orf58
ZNF614
ZNF165
OR1F12
NAT10
MTFP1
CLASP2
NKIRAS2
DNAJC7
STARD3NL
TRIM3
TIMM10B
ARFIP2
PABPN1
PEX3
ADAT2
CIPC
NFX1
ZNF484
NEMF
IPO11
DIMT1
SPAG4
CTCF
TDRD7
TEKT2
ADPRS
MFN2
OST4
EMILIN1
ACAD9
L1CAM
H2AX
DPAGT1
C2CD2L
TGFBRAP1
TDRD1
CCDC186
C2orf49
USF1
TSTD1
USP21
UFC1
SAMD10
PRPF6
ACTR3
LRRC8A
KYAT1
WSB1
TIGD1
PPWD1
MTHFSD
EIF4E2
CENPK
ZNHIT2
RAB11B
FAU
ZNF606
PGS1
MKS1
CREM
VTA1
NMBR
YWHAE
ARF4
RPS28
NDUFA7
NUF2
FASTKD1
THAP1
CDIP1
LRP2BP
ANKRD37
RBM15B
MANF
ANAPC11
ALYREF
UQCRQ
POLR3D
LEAP2
GDF9
MRPS18C
HELQ
CBWD5
CBWD3
CHFR
IFT172
GCKR
FNDC4
NDUFA12
CYSTM1
EXOSC9
RALGAPB
CHCHD5
SMPD4
MZT2B
SLC7A7
MRPL52
MMP14
AKAP9
AAR2
SPTLC1
TRMT5
SLC38A6
NDUFAB1
MFSD14B
CPEB4
SRSF3
UBAP2L
C1orf43
XRN2
RPL14
MRPL3
GDA
NUMA1
LRTOMT
CPPED1
PTRHD1
CENPO
MDP1
CHMP4A
UBE4A
PRPF8
ZCCHC9
WDR75
PDE6D
COPS7B
BAK1
KCTD5
RHOT2
RHBDL1
RAB5IF
FCF1
AREL1
MRPL53
MOGS
ZNF384
TPD52L2
ABHD16B
ZDHHC3
EXOSC7
VPS33A
CELSR3
GOSR1
ADPGK
MED23
ENPP3
TMEM208
LRRC29
EIF1B
ANKRD17
LSM5
AVL9
H4C11
HEXIM2
PRSS27
PRSS33
ELOB
RFC3
PLEKHM3
GLT1D1
NOL7
OPA1
MTIF2
LTV1
SMC3
BBS1
ATAD3A
CEBPZ
TBC1D22A
RNPS1
WRAP53
TP53
RFC2
ATRN
UBE2V2
TMEM242
TMEM237
SUMO1
NELFA
PFAS
HERPUD1
RPS13
SF3A3
TMEM198
CHPF
UTP4
DERPC
CHTF8
STAU1
SRPRA
DDX27
SIRT2
NFKBIB
ALKBH3
TM9SF1
PGAP2
IPO4
FBXO34
SUPT5H
RPS16
MAPK8IP3
TFIP11
WTAP
SOD2
KCNH7
CCDC88A
DDX46
MFSD14C
USP7
POLR2C
ZSCAN9
RARA
DNAJC11
POLR1F
LCLAT1
PSMB2
RRP1
FOXJ3
NOL3
KIAA0895L
EXOC3L1
E2F4
ZFPL1
TMEM262
MRPS35
CDCA5
FAM187A
EFTUD2
CCDC103
RPL35A
LMLN
IQCG
WDR36
TATDN3
NSL1
WDR74
STX5
TRA2B
PCNP
RNF10
PMPCA
ENTR1
COQ5
CFAP20
BCL2L13
ATP6V1E1
COMMD2
ZNF19
UBAP1
THADA
SEC23A
MRFAP1
CBWD6
TMEM199
SEBOX
POLDIP2
NSMCE3
NRBF2
KLHDC8B
CEP350
CCDC71
MED25
FUZ
CAAP1
TTC16
PTRH1
CFAP157
SNX13
RCAN1
ETF1
EIF1
ADAT1
CSNK2A1
CNOT1
EIF3E
SIT1
CCDC107
ARHGEF39
DHX15
LAMTOR5
DRG2
ABHD12
FAM131A
MBIP
SRRM1
SNAP25
RPP14
HTD2
NTSR2
LPIN1
SASS6
ZNF264
TP53BP1
ADNP
FAM227B
DTWD1
TAPT1
SPHK2
RPL18
FAM83E
GAN
NUFIP1
GPALPP1
SNRPB
CLTC
TMEM128
NCBP2AS2
NCBP2
ARFGEF2
PET117
KAT14
TFPT
PRPF31
DUSP3
CFAP97D1
ZNF410
PRPF4
NUP42
CDC26
TSEN15
ATF6
TRMT12
TPM4
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SNF8