ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HMGB1 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◣ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
DUX4
FRG2C
GTPBP6
GTF2IRD2B
USP31
SYT7
FRG2
MTRNR2L2
MSH3
DHFR
MCU
NAA25
DEDD
KATNBL1
NSFL1C
COQ2
STK17A
EPHX1
LRP12
NREP
MSRA
ZNF341
MXI1
JRK
ANKRD40
KIF5C
MTRNR2L1
KDM3B
ATL1
RNF220
ZNF860
OSBPL10
RHOB
SLC39A10
NUDT4B
ZSWIM6
CCDC88A
TMEM245
TMEM71
PHF20L1
KANSL1L
BCAR3
MAMDC2
HDHD5
CNIH1
JMJD1C
PRICKLE1
RAB11FIP2
PDCD2
DNAJC25-GNG10
DNAJC25
SCAP
TOP2B
CCN2
JPT1
NCOA5
BCAP29
ACVR2A
TMX4
NUDT4
INO80D
EIF4H
CCSER2
MET
CERS6
PREP
TES
ARHGAP29
LDLRAD3
OPN3
CHML
LOC102724770
DGCR6
MARK2
NBPF1
HOXA4
HOXA3
ATL2
ARHGAP28
ZNF280D
RNF146
IKZF2
PIGX
CEP19
DISP3
BZW1
ZNF839
TSPAN10
NPLOC4
FAF1
CDKN2C
LMO4
C7orf25
CRPPA
SPTLC2
DOCK7
ST3GAL3
VPS36
CKAP2
MOV10
GPSM1
CARD9
EID2B
EID2
RPS19
IBA57
THSD7A
ST7
C1QBP
DTWD2
CHRNA5
YWHAQ
DUSP5
PEX7
GNAI2
EPM2A
KMT5B
UPF1
PAM16
GALNT10
C7orf26
LIN9
HOXB8
HOXB7
HOXB6
PTBP1
CEP68
TM2D3
ARHGAP26
RAP2B
PTGES2
GRIK4
FOXN3
HHIP
AHCYL2
PLCB1
PELI1
ZHX3
MRFAP1L1
LDB1
BLOC1S4
ANKRD36B
QSOX2
CHAMP1
HEBP2
H2AZ2
SPTAN1
TAF5
SYPL1
TGFBR2
MAP2K2
SCOC
RHBDF1
NFIB
MPG
AGFG1
MAP4K5
RNF135
LIMS1
MARVELD1
ATXN2
UBE2S
UBE2E2
FBXO30
BTG1
NUDT3
EPN1
ETS1
BASP1
ZMYM4
TCF4
MYO5A
PUF60
POLG
ZNF609
PTX3
SLURP2
MAML1
LYNX1-SLURP2
LYNX1
LY6D
HMGB1
WDR26
FBXL7
NADK2
ASXL1
SIK3
SOCS5
AHCYL1
ZNF148
TRAK2
STRADB
PRKCA
SPAAR
MYO1B
ITGB1
HRCT1
PURA
SRSF9
SLTM
DYNLL1
ENDOD1
PINK1
MFSD14B
HSP90AB1
PPP3CB
SBNO2
G3BP1
VPS26A
ITPRID2
TTLL11
ELAC1
SIRT1
HMGN1
NUTM2E
ZNF706
OAT
YBX3
ACVR2B
RAC1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TBC1D8
EPHB1
RGL1
MTHFD2L
INPP1
AP3B2
SPR
ELL2
SRSF4
PSD3
LIG3
EXT1
SLC20A1
NFE2L2
GNB4
VAMP3
ESYT2
DYNC2I1
SMIM13
SGMS2
CLTB
TMED7-TICAM2
TMED7
COBLL1
RIC1
HDGF
METTL9
FBXL13
ECHS1
CMTM7
C15orf61
ARMC10
ARID5A
ZFAND3
ARNTL
GCLM
INPP5F
SLC4A7
TNPO1
SEC24B
RALGAPB
UBN2
SLC35B2
NFKBIE
TTC21A
GORASP1
FHL2
PARVA
ITGAV
TUBB4B
STPG3
FAM166A
TSPAN5
TMEM131
PRKAR2B
ZNF362
SMAD4
DENND1B
MCMBP
ARHGEF7
TM7SF3
SPDYE14
SPDYE10P
SNRK
MED21
GCLC
GATAD1
UBAC1
CREM
RNF103-CHMP3
RMND5A
ERAP1
XXYLT1
TMEM255B
LCORL
PCBD2
CHST3
SETD7
VRK1
TLN1
PANK1
DONSON
CREB3
TSPAN3
TRPC1
TPK1
HECTD2
ZNF76
USP3
MCC
EIF4G1
UGCG
R3HDM2
INHBC
DESI2
ZFAND5
ZBTB20
AKAP12
POGLUT3
TDRD7
SSU72
NOXA1
TATDN2
RC3H1
CDR2L
TAF4
CPSF6
PRDM11
ARHGEF37
SLC25A24
SHOC2
RUNX1T1
BBIP1
PDIK1L
ACTB
HLCS
VPS4A
IRAK3
SLC25A37
OXR1
KRT10
FOXN2
LRRC37A3
DENND4B
ZFAND4
PLEKHA8
MSRB2
ECE1
CALM2
STK39
PTEN
OSBPL1A
KLLN
NXF1
AFAP1
SNX25
PIK3CA
ID3
ECI1
CFAP97
SUN2
CAPN1
LACTB
KLF9
AKAP7
ZFPM2
ACTR10
TRAPPC3
MAP7D1
TSKU
TOMM6
PRICKLE4
FRS3
AP3D1
RRAS2
PRR7
STX7
FAM222A
ZDHHC14
TPRN
TMEM203
NDOR1
AFAP1L1
ZFAND6
TCF12
ADAR
SENP6
ARHGAP42
ZC3H14
PTPN21
ARHGEF11
GNG12
CCDC71L
TFAP4
MTRNR2L8
KIF27
FMNL2
FAM241A
TECPR2
RBM26
CINP
SNTB2
B3GALT1
WDR1
LGR4
GET4
UBE2J2
TNFAIP3
SLC30A1
RHOBTB1
HHEX
TRIM65
PRKAG2
MRPL38
BMP4
SMARCD2
COQ10A
CLSPN
B3GALNT2
APPL2
ANKRD52
ZNF124
TM9SF3
LRP8
COA8
BAG5
TMEM64
RALB
CHST11
VCL
UST
PHRF1
MAP3K3
BACH1
TRIM44
LIFR
TMEM43
CHCHD4
FXN
ADORA2B
DTD1
PUS7
GID8
DIDO1
C9orf72
RINT1
SORBS1
ENTPD4
SNX2
USP36
D2HGDH
CASTOR2
ING1
CARS2
AP3M2
STK35
RAP1GDS1
JAK1
ELF2
CRTAP
SMAD5
RAPH1
ZSWIM7
TTC19
IL17RC
PHAX
BSN
ALDH7A1
PROS1
LCOR
ARL13B
TOR1B
GATA2
DPP9
ZNF668
ZNF646
USP14
PLCL2
KCTD18
PTPRA
PACS2
GAB2
BRF1
TBC1D9
SCRT1
PRPF40B
MBTPS1
DGAT1
ARHGAP10
SASH1
RAD54L2
ETS2
SBF2
RNF139
MSANTD2
BLMH
LPIN1
DEK
PHF20
DDHD2
CARNMT1
TACC1
SH3D19
HESX1
FAM174C
DNAJC21
CIRBP
APPL1
PEAK1
NRG1
HMG20A
HEXD
CXCL2
CAPN5
ARL5A
HBEGF
EHD4
ZFP64
FBXO33
HIPK1
CELF6
CD164
B3GNT2
IRF2BP2
NAV1
MAP1B
LHX9
FAM193B
C1orf53
STX11
RAB4A
PRDM5
PAXBP1
HACD2
IER5
DST
CCDC138
ARFGEF2
STK24
NUCKS1
CAPZA2
NPHP3
NEK7
CDC42
TANC2
MAP2K1
GRAMD1C
ELK3
ATE1
PANK3
PAIP1
NDUFAF6
ZNF697
SIPA1L2
ETV6
ADD1
SESN1
MFSD14A
SPCS3
IMMP2L
EIF3L
CCDC117
ANKRD54
NOCT
MAP4K3
CTSO
YPEL2
RBM17
NR3C1
ARID1A
ZMIZ1
UBE2H
RSAD1
DDAH1
CMTM3
CHAD
TPM1
PTPN4
KCTD3
SMAD3
ITGBL1
FAM83G
EIF2AK4
JUP
SMIM19
SLC20A2
RAD23B
ANXA4
ZNF513
SNX17
MARCHF6
CHMP5
BAG1
TERF2
MTMR12
HSP90AA1
ABR
MAP1LC3B
LAMTOR3
HSF2
FBXO31
NR2C2
ZSWIM8
CHCHD1
CACNA2D1
UBXN2A
SYNE2
NAPEPLD
KCTD5
KBTBD2
MBD3
TRMT1
NACC1
ITGA6
CIZ1
ROCK2
PLPP4
PAM
LRRC8D
ZC3H12C
UNC5B
PRSS27
UBE2M
SACS
GNAI1
CHMP2A
GXYLT1
TCF7L2
POLR3GL
LRIG3
LIX1L
IGFBP4
ANKRD34A
ZBTB45
MROH1
HGH1
UBE2D3
CISD2
CAP2
KAT6A
ZFYVE9
TRPS1
UVSSA
TOMM40
SSNA1
ANAPC2
SNAI1
BMPR1B
SLC12A2
SENP8
RNF216
MYO9A
MYCBP2
FDX1
ASAP1
ZC3H7A
MIA3
GRK5
ADRM1
TBC1D30
MAP2
INTS6
TNIP2
TEX46
LHPP
KDM1A
NCOA7
IQSEC1
EXOC6
WTAP
WNT2B
SOD2
PLEKHA1
NCOA6
EML1
PI4K2A
PHIP
MORN4
TP53INP1
ORAI1
NAA38
MAP3K1
GPR146
CHD3
BOD1L1
ADNP2
RBFOX2
AGK
TMTC1
CTNNB1
ZNF511
TUBGCP2
OSBPL5
MORC2
LEKR1
ILKAP
FCHO2
SMURF1
SLC36A4
SGK3
NAMPT
SNX5
NXN
MGME1
FRYL
TSEN54
POLR3H
LLGL2
GLRX5
EPS8
CDC42BPA
CASKIN2
SRGAP1
RXYLT1
RAB7A
RAB32
NUFIP2
HYI
GGA2
DICER1
CDCA4
TMEM211
GRK2
ANKRD36
LRRC8C
DEGS1
PABPC1
NEDD4
FBXL22
DNAJB6
SFXN1
FGD5
DNMBP
CCND2
RMI2
RANBP17
NIPSNAP2
CAMSAP2
TMEM151B
COPRS
NFIA
EPB41
C11orf91
YBEY
NRIP1
MED13L
MCM3AP
FKBP9
RAP1B
PHC2
HRH1
TOLLIP
CEP170B
PTBP2
GPCPD1
DMRTA1
DCBLD1
CSRNP2
RELA
BPNT2
SH3BP5
RESF1
RAB40C
CLCC1
GSR
YRDC
PRSS23
CSK
CRYBG3
C1orf122
H2AZ1
FAM171A2
DNAJB14
USP10
PPM1A
HSPG2
CDC16
BOD1
ATXN7
WAC
VPS54
PRDM2
PLOD2
EIF2AK3
B3GNT5
USP49
PHF3
CNOT6L
CAST
UTP4
TLK1
MAPK8
DERPC
CHTF8
ZBTB34
YPEL1
SOCS1
NT5C2
SDCCAG8
CEP170
TWF2
PPM1M
TPP2
FIGN
FAM228B
CDCA7
TAC4
RAB21
PDK1
OTUD4
MAP4K4
IFFO2
FNTA
CSNK1E
CSF1
B3GLCT
SEMA4D
NIT2
LRRFIP1
ELK4
ZNF445
UBE2D2
PCDH9
NFKBIA
LIMS2
ODC1
HGS
FLNC
ARL16
SEPTIN9
RUFY1
LYL1
LOC100287896
LIPT2
HPCAL1
DUSP7
ANKRD36C
PROX2
NAE1
ATXN7L1
SPIN1
HERC2
SFTPC
PAQR3
LRRK1
LGI3
KLHL5
BMP1
UHRF2
TUSC1
SMARCC1
PKIA
MDFIC
DYNLL2
AFF1
ZHX1-C8orf76
ZHX1
RALY
PFN2
OSBP
CUL3
ZNF131
SUMO2
OAF
HEG1
BRAF
VEZF1
SFT2D3
PRNP
JADE2
HINT1
MTMR9
ZSWIM4
SMIM4
RAB35
NT5DC2
ITSN1
CRYZL1
PRKAR1A
PREX1
H3-3A
DENND5A
CACHD1
ING2
PEX10
METTL23
JMJD6
CYP2U1
TMEM51
SCN8A
LYPLA1
RAD52
ZBTB25
ZBTB1
NAP1L4
FAN1
TEX38
TDRD3
SPRING1
SPPL3
RNFT2
RNF103
NDFIP1
HNRNPAB
ATPAF1
UBE2E3
SCRT2
MBD2
AMMECR1L
TIGD5
NIN
IDH2
HNRNPR
EEF1D
CCNJ
AAK1
WDR53
SSX2IP
PKD1
FBXO45
ENPP1
BAZ1B
TXNDC16
TRIM33
GPR137C
TP53BP2
SAV1
NOTCH1
SSH2
INAFM2
CTCF
EDIL3
XKR6
SVIL
NR4A2
C17orf58
SPATA9
RHOBTB3
COL23A1
TMEM181
RGMB
PTTG1IP
ACER3
RNF169
GNPTAB
CD81
VARS1
TPBGL
PRKCQ
PLPP3
NTAN1
ERBIN
TUBB2A
SUV39H2
STAT5B
PHACTR2
ME3
ERRFI1
ANKRD12
AGO3
SURF4
SNCAIP
SLC12A9
FAM107B
CKAP5
RFXAP
RAP2A
SVBP
SEMA3F
ITPKC
FAM47E
ERMAP
DMWD
DMPK
COQ8B
MFSD14C
OSGIN2
DBN1
CPE
NT5DC1
TARS3
TNKS2
SYT14
MAP3K14
KIAA1841
FOSL1
DAPK2
CCDC85B
SRXN1
RARG
BRPF3