ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475368 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◢ SMAD9: Average

◢ SRX10475367: Hep G2

◣ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
INSM2
FRG2C
IQSEC3
MTRNR2L1
LIN28A
MTRNR2L2
MSH3
DHFR
FAM24A
NKX1-1
DUX4
CELSR3
HTR5A
KCNH7
FRG2
L1CAM
GLRA1
RAB37
MTRNR2L8
RANBP3
CHGB
EPHA10
CPLX2
SMIM17
SNAP25
BARHL1
LEMD3
DLGAP3
SLC7A6OS
PRMT7
RTBDN
KDM3A
PIK3R3
CNOT3
GDAP1L1
MAPK8IP2
OPRL1
LKAAEAR1
KATNA1
ODC1
KCNK12
SLC39A3
HDAC2
GCFC2
SAYSD1
TRIM44
SLC12A5
CCDC200
NOC3L
E2F6
RFC1
AATF
RNF130
CTDSPL
COL23A1
SNRPB2
H4C12
MMP24
SST
CDIP1
SIGLEC10
STK25
PTPRS
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MYT1
MTHFD2
EVI5
VRK2
N6AMT1
UNC80
HES3
AIP
HBQ1
HBA1
KAT5
CHRM4
SPOP
MED31
C17orf100
LHFPL5
SLBP
DHDDS
WDR36
CCDC92B
RBM28
CDK5RAP3
PMVK
NDUFS3
KBTBD4
ABCA3
CEMIP
KLF11
IPMK
CISD1
DIABLO
ANK1
MSL2
FAM227B
DTWD1
SCGN
NME6
CEP295
MTF2
CYB5R4
STAT3
TMEM106B
ITPRID2
LARP1
TBC1D13
CPQ
ANKRD36
RNF103-CHMP3
RMND5A
LINGO1
HMGA1
HECTD1
TK2
CKLF-CMTM1
CKLF
ESAM
MLH3
UTP11
NDUFAF5
ESF1
DHRS4L2
LRIF1
MARCHF4
TCFL5
ANKRD36C
TRIP4
LACC1
CCDC122
FMNL3
UTS2R
MRPL44
TUBA1B
VWC2L
SLC25A21
VPS29
RAD9B
TOMM34
CCDC83
PNPT1
STMN3
RTEL1
LTV1
XRN2
MLXIP
THUMPD2
HEXD
PCNA
AP3B2
VGF
ZFYVE27
EFCAB13
USP40
LCLAT1
DLL3
USP14
TIGD1
EIF4E2
H3-3B
PRRT2
MAZ
CERS6
NSUN5
PIGF
CRIPT
MRPL3
HINFP
MED23
GPR158
FAT4
UBE2Q1
TBCB
RNASEH1
POLR2I
OVOL3
HES6
STX16
H4C11
AP3S1
TASOR
SCFD1
HEATR5A
TSEN54
CASKIN2
PEDS1-UBE2V1
PEDS1
FANCL
SNRPB
RBM12
CPNE1
PLEKHM3
ANKRD36B
CNTRL
C5
HHATL
TRMT11
OR2T1
PHF3
NDUFAF1
NPPB
NTSR2
MRPL39
TBC1D19
SNTG1
NBEAL1
TM9SF1
SRSF6
MRPL19
RPS6
TAF10
PDE6D
COPS7B
OGDHL
MIA2
RPL37A
RRP1B
HSF2BP
CC2D1A
C19orf57
METTL15
KIF18A
RPL31
TUBGCP3
PALB2
DCTN5
SLC25A10
DHX40
USP37
CNOT9
LAMTOR5
SEC23A
HDAC4
CNPY3
HPCA
CRYAA2
CRYAA
RBL1
SRP19
GEMIN2
PDE7A
PSMA1
PDE3B
POLR2J3
EPM2A
DTD2
DCLRE1C
ZNF780B
MPHOSPH6
MFF
C15orf61
ZNF843
ZC3H8
TTI1
RPRD1B
RAD50
SMAD2
CDKN2C
PGRMC2
RANBP2
NBPF1
PMS2
AIMP2
ZCCHC7
SPATA25
NEURL2
CTSA
ZC3H15
CPPED1
COA1
DDX1
USP30
SVOP
ATP5F1E
POLR3E
KIF27
PTDSS1
MTERF3
MARCHF7
ZNFX1
NADK2
DPY19L4
TMEM186
PMM2
C5orf51
EBAG9
WASHC4
CRH
DHRS4L1
LMCD1
PIK3IP1
PRKDC
MCM4
ISM1
DCP1B
GRM1
MRPL17
LOC112694756
C14orf93
ZFR
SLC36A4
ACSF3
POLE4
FAM98B
KAAG1
DCDC2
DGAT2
SLC39A1
CREB3L4
SCLT1
RIOK2
PCF11
C4orf33
THUMPD3
NAT10
CFDP1
HBS1L
ASNSD1
ASDURF
AHR
C7orf25
FAAP20
H1-2
MRPL21
IGHMBP2
TPR
ODR4
NAV2
CALM2
COCH
WDR89
C10orf88
EIF2S2
CMTR2
FUS
RPIA
MORN2
DHX57
NOB1
SPAG4
VPS16
PCED1A
SPAAR
EMC2
H4C15
H4C14
DDX56
RBM7
C11orf71
HEXA
C5orf24
RSPH3
TRDMT1
PROCR
PSMD14
ZNF248
UBE2D3
CISD2
SCAPER
PGGT1B
GALK2
H4C2
H3C2
TDRKH
SULT6B1
H2AC4
CEP162
CEBPZOS
XKR9
LACTB2
MXD1
NUP54
BUD13
NXF1
LDHA
NOL7
LRP2BP
ANKRD37
GCA
PDHB
NOTCH2NLA
ZC3H6
NOL10
RAD9A
DCPS
ZNF280D
METTL3
ASCC1
ANAPC16
GPN1
CCDC121
MSRB3
HIRIP3
FAM187A
EFTUD2
CCDC103
CRBN
FANCD2
FN1
STT3B
COG7
TMEM268
POLG2
PFDN4
RBM45
PDE11A
PBX3
MMADHC
TMX3
CCDC102B
DNAJC10
CKAP5
CDC27
DDX18
TBC1D9
PSME3
PRR3
GNL1
TRAPPC6B
PNN
RASSF1
RAE1
NR1H3
H2AZ2
ACP2
FBXO8
CEP44
OXA1L
TANK
IPO4
MTMR2
STK35
MTX2
NCOA3
GDI2
CDCA7
ABCB6
KBTBD3
AASDHPPT
SRSF1
UCP2
MRM3
GLOD4
TAMM41
ESCO1
RPS27A
CLHC1
TOB1
TTC12
UBA5
ACAD11
IMMP1L
ELP4
PDRG1
LCMT2
CHID1
ADAL
YAE1
UBR2
RILPL1
KCNB1
RPS3A
CCDC90B
DNAJC6
CCNL1
ENOSF1
ZPBP2
IKZF3
SSTR5
SRRM3
PTPRN
FN3K
WTAP
SOD2
GTF3C3
EIF3B
CHGA
GJA10
EXOSC6
NRSN1
CHRNB2
ABCC6
SCRT2
NEUROD1
LTB4R
CIDEB
LDAH
CDK5R2
WDR74
RABGGTA
PPP1R3C
SP5
PTMA
AKAP10
TENT4A
SF3A3
ACTL6B
AAR2
PGBD5
SLC3A2
UNG
TCAIM
ALKBH2
SLC7A7
PPY
LRRC59
FAM177A1
AARS2
CYP21A2
ZNF286A
GET4
LUC7L
GID8
DIDO1
RNF187
NANP
CCDC107
NR1D1
TMEM181
SCAMP5
RMND1
DNAJC11
ARMT1
PTP4A2
SCAF11
INTS12
GSTCD
ENO1
C6orf136
SOS1
SMC3
SUGCT
MPLKIP
IFNAR1
PCDH8
MAP2K2
LRP6
NUP62
IL4I1
DCP1A
ATF5
ADCY4
SPTSSA
NAA20
CTF1
BCL7C
THNSL1
MAPK8
EIF4A3
SCGB1D2
PC
NHLRC1
GRM2
CTR9
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
RRP15
PEX3
FGFBP3
ARL6IP1
ADAT2
NID1
DOCK6
TRIM67
GRIA2
ZNF501
IARS1
NUP160
CDC16
TOLLIP
RXRA
NREP
ELOVL3
PIKFYVE
NUBP1
GOPC
PDE4C
CABP7
ZNF84
ZFP1
URGCP
UBE2D4
SRP54
L2HGDH
DMAC2L
CUL5
SPHK1
SLC9B1
OSBPL8
HELB
GMCL1
CDK5RAP1
AKAP11
TRIM8
MAT2A
ZMYND10
RETSAT
PMS1
PARD6A
ORMDL1
NPRL2
CYB561D2
ACD
ZKSCAN8
MIPOL1
HAAO
G2E3
FTCDNL1
CLVS1
C14orf119
ACIN1
KANSL3
FER1L5
CEP126
C12orf66
ANGPTL5
SHOX2
RSRC1
CBWD5
CBWD3
BPHL
ZSCAN9
DBI
C2orf76
ALCAM
MLLT1
LIMS1
TRMT6
RUNDC3A
MRPS35
MCM8
COPS6
PAQR4
KREMEN2
APMAP
AGPS
SLC18A3
PBLD
MEIS1
HNRNPH3
HEATR3
GOLGA8A
CHAT
ZSWIM7
UFSP1
TTC19
TINF2
SUGP2
OXSM
NGLY1
MSH5
MRPL35
MRPL16
IMMT
GRM4
CLIC1
ARMC6
ACHE
ROMO1
NFS1
MOB4
CTNNA2
CRNKL1
CFAP61
CDKN2AIPNL
AP3S2
ATR
ACAD9
ZNF219
MRI1
CD274
TTI2
NUDT4
COQ8A
ZNF2
RNF103
POGK
NET1
UBAP2L
SOGA3
C1orf43
NABP1
PIMREG
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
TMEM18
RAB3GAP2
LOC100287896
LIPT2
KHDRBS1
ASCC3
ANAPC10
ABCE1
PLIN5
HPS5
GTF2H1
ELOVL1
PSMD7
PHF1
JRKL
ITGB3BP
GMNN
EFCAB7
DHRS2
COMMD1
CCT4
CCDC82
C16orf46
WDR43
TTLL4
RABL2B
PAAF1
FBXO33
COA4
VTA1
THOC3
SOWAHC
SHQ1
SEPTIN10
SEC24A
PYGB
NMBR
CEBPZ
SPATA5
SC5D
RPP38
NUDT6
HNF4G
ESYT3
CTDP1
CCDC116
TAB1
RETREG2
IMPDH2
CNPPD1
ATG7
TOP3B
SLC38A1
HNRNPC
EEF1AKMT1
CCDC59
WASHC1
TTC26
PSMF1
MVD
CTNNB1
CD320
ZNF202
RPL15
NKIRAS1
HSD17B1
C2orf73
ARPP19
RPL5
PCNX4
OSGEP
EPB41L4B
DCAF10
APEX1
SERF1B
SERF1A
RNMT
PGP
PCID2
MMAA
MIS18BP1
GATAD2A
FAM210A
CUL4A
BRICD5
THUMPD1
SLC7A5
RNF146
PRPSAP1
PET117
MRPL27
MARCHF8
LBP
KAT14
EME1
TSG101
STX18
STARD7
NOP2
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
ZNF425
ZNF398
WDR48
UCKL1
SLC25A36
SEC61G
SDCBP
SCN11A
POLR1H
GOLGA5
FBXO4
EEF1AKMT2
EAPP
DDX19B
CWC25
ATXN2L
RRN3
PPT1
NPM1
KIZ
KIAA1958
DUSP28
DCUN1D5
CHFR
C9orf147
ANKMY1
ANKEF1
WDR41
TOMM5
STIP1
PPME1
NSRP1
NHEJ1
GAS2L3
CPNE4
C2CD3
TTPAL
TRA2B
SLC37A4
PTPRA
PPP4R3B
NFIX
HSD17B12
EIF4G2
CD302
TMEM223
TMEM179B
TEX14
RAMAC
RAD51C
PHOSPHO2
DHRS4
CHEK1
CCDC173
AHI1
TMEM101
TBC1D15
MOCS2
BMS1
ACAP2
USP47
TNPO1
TEX46
REXO2
KDM1A
HNRNPF
GINS1
DUS1L
TNXB
THAP5
SPAG16
SNRPD1
SF3B6
RIF1
PBRM1
MATN1
GNL3
FAM228B
DNAJB9
CENPA
C4B_2
C4B
AKTIP
ZER1
TTC30B
SMIM26
SLC35F5
NFU1
MLH1
LSM12
G6PC3
EPM2AIP1
DUS2
DDX28
CZIB
CCDC34
TOB2
TBC1D32
SLC25A28
SF3B5
PSMD12
L3HYPDH
JKAMP
ICE2
CIAO3
CEP192
ASNS
ZCCHC9
TMEM116
STAU1
SLX4IP
SF3A2
SEH1L
RPS7
RPLP1
PLEKHJ1
MKKS
MAGOHB
LMAN1
KLHL9
HUS1
H4C3
H1-6
FBXO48
EXD1
ERP29
DDX27
CHP1
C6orf62
APLF
SMPDL3A
SFI1
SERINC3
POLM
NCL
MGA
CBWD6
CAT
ZFHX2
ZBED8
THTPA
NPIPB6
MBIP
GPR6
FAAH
PPP1R3D
PPM1D
OSGEPL1
NCK1
FAM217B
CBWD2
ANO10
ABHD5
ZBED9
TGFBRAP1
SGF29
PRMT2
PLAA
IFT74
FAM149B1
ECD
CSE1L
UBE2E3
SLC25A13
SEC31A
RALGAPA1
PRKAR1A
NDUFA12
KRR1
KNOP1
IQCK
IFT88
CHORDC1
PLS1
LRRC61
KANSL1L
JAM3
IDH3B
GOSR1
DBP
C18orf25
ATP5MC2
ACTR3C
WDR35
PUM2
FRG1
TMA16
SDHAF3
SCAND1
RIOK1
MDP1
CHMP4A
CAGE1
ANAPC1