ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SMAD9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◣ SMAD9: Average

◢ SRX10475367: Hep G2

◢ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
IQSEC3
INSM2
FRG2C
MTRNR2L1
LIN28A
DUX4
NKX1-1
HTR5A
FAM24A
MTRNR2L2
MSH3
DHFR
CELSR3
KCNH7
RAB37
LOC102724770
DGCR6
FRG2
CPLX2
RANBP3
GLRA1
CHGB
L1CAM
MTRNR2L8
SNAP25
TMEM242
BARHL1
ZC3H18
DLGAP3
EPHA10
SMIM17
EAPP
LEMD3
AFAP1
RTBDN
MAST1
SLC7A6OS
PRMT7
MAMDC2
KDM3A
MAPK8IP2
SST
CADM3
ZNF23
PIK3R3
PPFIA3
GDAP1L1
C19orf73
GCFC2
CDIP1
LHFPL5
CLPS
SLC12A5
SIGLEC10
PTPRS
RNF130
CNOT3
COL23A1
N6AMT1
CTDSPL
ICMT
HES3
AATF
TRIM44
CCDC92B
H4C12
H4C11
H2BC15
H2AC15
EVI5
CCDC200
HBQ1
HBA2
HBA1
SLC39A3
KATNA1
MARCHF4
UNC80
CPQ
CHRM4
RIPPLY2
RFC1
CYB5R4
RGS19
OPRL1
LKAAEAR1
STK25
HDAC2
BPIFA3
KLF11
HES6
VGF
FAM118A
NOC3L
USP14
ODC1
CEP295
SAYSD1
STAT1
NPPB
IPMK
CISD1
E2F6
NTSR2
LPIN1
RNF103-CHMP3
RMND5A
MYT1
ANKRD36
POLR2J3
STX16
RNASEH2C
PMVK
KAT5
SNRPB2
SLC25A10
MRPL12
AIP
CERS6
NSUN5
PMS2
ANK1
AIMP2
ZFYVE27
WDR36
METTL15
KIF18A
SCGN
OGDHL
RBM28
UBE2Q1
EPM2A
CHRNB2
SPOP
DIABLO
STMN3
RTEL1
HECTD1
VRK2
TCFL5
HDAC4
STAT3
GRM1
DNAJC6
DDX1
LMCD1
TIGD1
EIF4E2
RAD50
FMNL3
CNPY3
ANKRD36C
MED31
C17orf100
SLC25A21
DPY19L4
ABCA3
PPP2R2C
TMEM129
TACC3
SLBP
TMEM106B
MSL2
LCLAT1
HPCA
DEFB132
CCNL1
DHRS4L2
CNTRL
C5
VPS29
RAD9B
ENOSF1
PLEKHM3
CRYAA2
CRYAA
ZPBP2
NOMO2
IKZF3
EFCAB13
CEMIP
MFF
TRIP4
TK2
PCLAF
FANCL
CKLF-CMTM1
CKLF
TM9SF1
IPO4
DHX40
DTD2
THUMPD2
SNRPB
SHOX2
MTF2
NME6
HEXD
USP30
SVOP
SSTR5
PSMA1
PDE3B
UTP11
USP37
MRPL44
FHL3
CNOT9
SCFD1
MLN
HEATR5A
CMTR2
NDUFAF5
ESF1
NOMO3
MEIG1
DCLRE1C
THUMPD3
VSIG2
TOMM34
STK4
ESAM
DHDDS
CCDC83
SRRM3
RPL31
EBAG9
TMEM186
PMM2
LACC1
CCDC122
UNK
H3-3B
ZCCHC7
PTPRN
RAP1GAP
LTV1
KCNK12
PGRMC2
TASOR
TAF12
TUBA1B
H2BC14
H2AC14
LAMTOR5
TMEM230
POLE4
PCNA
MRPL39
CDS2
PIGF
OR2T1
FN3K
CRIPT
WTAP
SOD2
GTF3C3
C2orf66
ITPRID2
MRPL3
SPAG4
RBM12
CPNE1
RBL1
LDHA
EIF3B
C7orf25
TSEN54
LLGL2
CASKIN2
RANBP2
FAM98B
NBPF1
C10orf88
HINFP
USP40
CHGA
XRN2
GJA10
HBS1L
EXOSC6
FUS
CA4
NOL7
SRSF6
RSPH3
KAAG1
DCDC2
MRPL17
TBC1D19
HHATL
FAAP20
LRP2BP
ANKRD37
TMX3
H4C15
H4C14
H3C15
H3C14
CCDC102B
ZSWIM1
TMED4
SPATA25
NRSN1
NEURL2
DDX56
CTSA
PRRT2
PEDS1-UBE2V1
PEDS1
PAGR1
MAZ
SRP19
MIA2
LOC112694756
RPL37A
PHF3
MMP24
MTMR2
ABCC6
ANKRD36B
SCRT2
PTDSS1
NOL10
MTERF3
MRPL19
MARCHF7
DNAJC10
NEUROD1
MORN2
DHX57
C15orf61
AP3S1
ZMYND10
RPIA
RASSF1
TUBGCP3
LTB4R2
LTB4R
CIDEB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TOB1
RBM45
PDE11A
H1-2
TRDMT1
RAD9A
PPP1CA
LDAH
CDK5R2
WDR74
STX5
MTHFD2
ATP5F1E
TGM1
STT3B
RABGGTA
PIK3IP1
SCAPER
MRPL21
IGHMBP2
XKR9
SPNS2
SLC39A1
LACTB2
CRTC2
CREB3L4
WASHC4
VPS16
RPS6
PRKDC
PCED1A
MCM4
CPPED1
MXD1
PPP1R3C
C14orf93
SP5
NAT10
DCPS
COCH
PTMA
OXA1L
PROCR
AKAP10
CFDP1
TENT4A
SPAAR
HRCT1
SF3A3
GEMIN2
CRBN
ACTL6B
AAR2
PGBD5
SLC3A2
CDK5RAP3
UNG
TCAIM
RAE1
MTRNR2L3
EIPR1
ALKBH2
WDR89
SLC7A7
PPY
POLR3E
MRPL52
LRRC59
FANCD2
FAM177A1
AARS2
PSME3
NDUFS3
KBTBD4
FAM180B
COG7
BECN1
RBM7
ESCO1
C11orf71
CYP21A2
ZNF286A
TSSK4
GET4
LUC7L
FAM234A
GID8
DIDO1
SIT1
RNF187
NANP
FAM227B
DTWD1
CCDC107
ARHGEF39
NR1D1
ABCB6
TMEM181
SCAMP5
RMND1
GCA
DNAJC11
ARMT1
GPN1
CCDC121
TANK
PTP4A2
SCAF11
LARP1
INTS12
GSTCD
ENO1
C6orf136
ZC3H6
SOS1
HID1
CDR2L
TBC1D13
SMC3
SUGCT
MPLKIP
IFNAR1
PCDH8
MAP2K2
LRP6
NUP62
LINGO1
IL4I1
HMGA1
DCP1A
ATF5
RIPK3
LTN1
ADCY4
WWP2
SPTSSA
PRR3
NOB1
NAA20
H4C2
H3C2
H2AC4
GNL1
CTF1
BCL7C
THNSL1
MAPK8
EIF4A3
SCGB1D2
MLH3
DDX18
TRAPPC6B
PNN
PC
NHLRC1
GRM2
C1QL2
TUSC2
CTR9
CDCA7
SUPT3H
LRIF1
HSPE1-MOB4
HSPE1
HSPD1
CKAP5
PBX3
NOMO1
UTS2R
TAMM41
RRP15
PEX3
MUC3A
FGFBP3
BHLHE40
ARL6IP1
ADAT2
VWC2L
NID1
DOCK6
TRIM67
PSMD14
PNPT1
IMMP1L
GRIA2
ELP4
ZNF501
NCOA3
IARS1
QTRT1
NUP160
HS6ST1
MLXIP
CDC16
TOLLIP
RXRA
NREP
ELOVL3
AP3B2
PIKFYVE
NUBP1
GOPC
PDE4C
CABP7
BSPRY
ZNF84
ZFP1
URGCP
UBE2D4
SRP54
NPIPA3
NPIPA2
L2HGDH
DMAC2L
DLL3
CUL5
AP5S1
SPHK1
SLC9B1
OSBPL8
HELB
GMCL1
CDK5RAP1
AKAP11
TRIM8
MAT2A
MAP2K3
TMEM115
SRSF1
RETSAT
PTPRH
PMS1
PARD6A
ORMDL1
NPRL2
MED23
GPR158
FAT4
ENPP3
CYB561D2
C16orf86
ACD
ZKSCAN8
MIPOL1
LMLN2
HAAO
G2E3
FTCDNL1
CLVS1
C14orf119
ACIN1
TBCB
RNASEH1
POLR2I
PAX5
OVOL3
KANSL3
FER1L5
CEP126
C12orf66
ANGPTL5
RSRC1
CBWD5
CBWD3
BPHL
ZSCAN9
DBI
C2orf76
ALCAM
MLLT1
LIMS1
ZNF3
TRMT6
RUNDC3A
MRPS35
MCM8
COPS6
PAQR4
MEIS3
KREMEN2
KBTBD3
APMAP
AGPS
AASDHPPT
SLC18A3
PBLD
MEIS1
HNRNPH3
HEATR3
GOLGA8A
CHAT
ZSWIM7
UFSP1
TTC19
TRMT11
TINF2
THAP7
SUGP2
P2RX6
OXSM
NGLY1
MSH5
MRPL35
MRPL16
IMMT
GRM4
GMPR2
DDAH2
CLIC1
ARMC6
ACHE
ROMO1
NFS1
NDUFAF1
MOB4
CTNNA2
CRNKL1
CFAP61
CDKN2AIPNL
AP3S2
SNTG1
RPS27A
NBEAL1
CLHC1
ATR
ACAD9
ZNF219
ZFP90
TMEM253
MRI1
CD274
TTI2
TPP1
TAF10
RRP8
PDE6D
NUDT4
ILK
COQ8A
COPS7B
ZNF514
ZNF2
RRP1B
RNF103
POGK
NET1
HSF2BP
CC2D1A
C19orf57
UBAP2L
SOGA3
C1orf43
PALB2
NABP1
DCTN5
CCDC57
SEC23A
PIMREG
MYBPHL
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
AIPL1
TMEM18
SIRT6
RAB3GAP2
PDE7A
LOC100287896
LIPT2
KHDRBS1
ASCC3
ANAPC10
ABCE1
PLIN5
LRG1
HPS5
GTF2H1
ELOVL1
CDC20
ZNF780B
SYNGAP1
SLC19A1
PSMD7
PHF1
MPHOSPH6
JRKL
ITGB3BP
GMNN
EFCAB7
DHRS2
CUTA
COMMD1
CCT4
CCDC82
C16orf46
ZNF843
ZC3H8
WDR43
TTLL4
TTI1
RPRD1B
RABL2B
PAAF1
FBXO33
COA4
VTA1
THOC3
SOWAHC
SMAD2
SHQ1
SEPTIN10
SEC24A
PYGB
NMBR
FAF1
CEBPZ
CDKN2C
SULT4A1
SPATA5
SC5D
RPP38
NUDT6
HNF4G
ESYT3
CTDP1
CCDC116
ACBD7
TAB1
SLC23A3
RETREG2
NDUFAF3
IMPDH2
DALRD3
CNPPD1
ATG7
ZC3H15
TOP3B
SLC38A1
HNRNPC
EEF1AKMT1
CCDC59
WASHC1
TTC26
PSMF1
MVD
CTNNB1
COA1
CD320
ZNF202
RPL15
NKIRAS1
KIF27
HSD17B1
COASY
C2orf73
ARPP19
ZNFX1
RPL5
PIP4P1
PCNX4
OSGEP
NADK2
EPB41L4B
DCAF10
APEX1
SERF1B
SERF1A
RNMT
PGP
PCID2
MMAA
MLST8
MIS18BP1
GATAD2A
FAM210A
E4F1
CUL4A
C5orf51
BRICD5
THUMPD1
SLC7A5
RNF146
PRPSAP1
PET117
MRPL27
MARCHF8
LBP
KAT14
EME1
CRH
TSG101
STX18
STARD7
NOP2
HHIPL1
HEATR1
FBXL17
DHRS4L1
CLN5
CLK1
CCDC85C
ADSS1
ZNF425
ZNF398
WDR48
UCKL1
SLC25A36
SEC61G
SDCBP
SCN11A
PPP1R11
POLR1H
ID1
GOLGA5
FBXO4
EEF1AKMT2
DDX19B
CWC25
ATXN2L
ABRAXAS2
AARS1
RRN3
RNPEPL1
PPT1
NPM1
MYBL2
KIZ
KIAA1958
ISM1
DUSP28
DCUN1D5
DCP1B
CHFR
C9orf147
ANKMY1
ANKEF1
ZFR
WDR41
TOMM5
STIP1
SLC36A4
PPME1
NSRP1
NHEJ1
GAS2L3
CPNE4
C2CD3
ACSF3
TTPAL
TRA2B
SLC37A4
PTPRA
PPP4R3B
PLA2G10
NFIX
HSD17B12
EIF4G2
CD302
TMEM223
TMEM179B
TEX14
RAMAC
RAD51C
PHOSPHO2
DHRS4
DGAT2
CHEK1
CCDC173
AHI1
TMEM101
TBC1D15
SCLT1
RIOK2
PCF11
MOCS2
C4orf33
BMS1
ACAP2
USP47
TNPO1
TEX46
REXO2
KDM1A
HNRNPF
GINS1
DUS1L
DBNDD2
TP53I3
TNXB
THAP5
SPAG16
SNRPD1
SF3B6
RIF1
PBRM1
MATN1
GNL3
FAM228B
DNAJB9
CENPA
C4B_2
C4B
ASNSD1
ASDURF
AKTIP
AHR
ZER1
TTC30B
TPR
SMIM26
SLC35F5
ODR4
NFU1
NAV2
MLH1
LSM12
G6PC3
EPM2AIP1
DUS2
DPEP2NB
DDX28
CZIB
CCDC34
CALM2
TOB2
TBC1D32
SLC25A28
SF3B5
PSMD12
L3HYPDH
JKAMP
ICE2
CIAO3
CEP192
ASNS
ZCCHC9
TMEM116
STAU1
SLX4IP
SF3A2
SEH1L
RPS7
RPLP1
PLEKHJ1
MKKS
MAGOHB
LMAN1
KLHL9