ChIP-Atlas: Target genes

Potential target genes for DNMT1

Query protein: DNMT1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478478 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
DNMT1's Target genes

◢ DNMT1: Average

◢ SRX3148637: HBEC3-KT

◢ SRX3148642: HBEC3-KT

◢ SRX3148647: HBEC3-KT

◢ SRX3148652: HBEC3-KT

◣ SRX10478478: Hep G2

◢ SRX10478479: Hep G2

◢ SRX2424698: K-562

◢ SRX2424699: K-562

◢ SRX156110: NCCIT

◢ SRX156118: NCCIT

◢ SRX1021632: PC-3

◢ SRX1021633: PC-3

◢ DNMT1: STRING

FRG2C
NPAS4
IQSEC3
XKR7
FRG2
MTRNR2L1
INSM2
DUX4
HTR5A
NKX1-1
CELSR3
MTRNR2L2
MSH3
DHFR
NTSR2
RAB37
STX16
LRRC59
LIN28A
NUF2
CNOT3
BARHL1
CPLX2
SMIM17
FAM24A
NSFL1C
GLRA1
COL23A1
CHGB
L1CAM
CCDC200
SRRM3
NHLRC1
RANBP3
WASHC1
EIF4A3
MED23
PET117
KAT14
CRYAA2
CRYAA
DHRS4L2
GTF3C3
SF3A3
SNAP25
PLEKHM3
MAPK8IP2
FITM2
POTEH
SLC35A3
HDAC4
TRIP4
MTRNR2L8
CDK5RAP1
RANBP2
TBC1D13
POLR3E
RTF2
ZNF296
GEMIN7
IPO4
OR2T1
STX18
WDR35
TSEN15
MDP1
CHMP4A
CCDC88A
CASC3
RAD54L2
SCFD1
MRPL53
PSMF1
TACO1
DCP1A
MRPS31
EPN1
KCNH7
MOB4
HES3
MTF2
DCAF10
SCNN1G
FRA10AC1
DPY19L4
RABGGTA
VPS4A
AAR2
SCRT2
OPA1
NOL7
EXOC2
NRL
DCAF11
HECTD1
TBC1D19
FAM227B
DTWD1
DNAH14
TCTE3
ERMARD
ARL6IP1
DTD2
MRPL44
ENOSF1
PRMT5
NDUFAF5
ESF1
CACYBP
MYT1
PEX3
ADAT2
ACTR5
SNX17
EIF2B4
TCFL5
KANSL3
FER1L5
ANK1
METTL9
CHRNB2
IHH
HBQ1
HBA1
BAIAP2
CCDC107
H4C12
ABCC6
MFF
AP3S2
NME1-NME2
NME1
DUS1L
SIK2
SMIM8
TMEM248
TMEM242
UNC80
MNAT1
RRP1B
HSF2BP
SAR1B
CLUAP1
C16orf90
TMEM107
HEATR5A
ANKRD36C
SCAND1
SECISBP2L
ZNF23
ANKAR
SEC14L1
USPL1
HMGB1
SCRT1
RAB5IF
EXOG
RRN3
ATXN2L
POLR2C
LRRC37A3
IRF9
RBM45
PDE11A
HSPA2
CEP192
KRT12
MRPL21
IGHMBP2
NOC3L
NBPF1
FAM153B
MRPL40
HIRA
PHF1
RHOT2
RNMT
RABL2B
FAM210A
ICE2
NFE2L2
TBCD
PKP4
CCDC148
MRTFB
MIPOL1
STAT3
CCNC
ZNF337
LHFPL5
LDAH
RGPD8
RGPD6
RGPD5
PLCB1
N6AMT1
TVP23B
TRMT61B
OSGIN1
CBWD1
VPS36
CKAP2
LAMP1
ELOVL2
BMS1
MRPL17
CDH15
NCOA5
TMA16
B3GAT2
RPL6
PTPN11
HDAC2
SLC44A1
NAGK
GALR1
EPHA10
USP30
TAMM41
NOB1
SAYSD1
BRMS1L
WDR45B
SST
KHK
ZNF391
ERCC6L2
TAB1
GOT2
UBR3
METTL5
LATS1
SLC39A4
CPSF1
GTF2H2
OPRL1
LKAAEAR1
GTF2H2C_2
PMS2
AIMP2
MMP24
SYP
DPH7
AHI1
UBE2Q1
PKIG
UGGT1
TP53I3
CAB39
AARS2
SEC13
H4C15
H4C14
DHRS13
EAPP
YWHAB
SLC39A13
BUD13
GAGE2C
GAGE2B
GAGE2A
OR6B2
NDUFA10
C16orf72
AKAP9
INTS12
GSTCD
ITGAV
TRIAP1
KCTD18
VRK2
ATP5F1E
POLR2J3
CCDC92B
CWC25
GDAP1L1
AMZ2
PDZD9
NDUFA6
LRFN3
CDIP1
HMGA1
RPS7
NDUFA12
HM13
PARL
RNF149
CDKN2AIPNL
GRIA2
UTP3
TMEM19
GALNT15
TMX4
CSTF1
AURKA
ABCA3
ZNF721
PIGG
EDEM2
WASHC2C
L3MBTL1
LUC7L
KMT2C
EFCAB13
NFAT5
CEP126
ANGPTL5
COG2
MAP7
NDE1
MARF1
WDR36
ZSCAN30
TUBGCP3
DHX40
ZMPSTE24
RNF103-CHMP3
RMND5A
ZNF219
LCMT1
SSNA1
ANAPC2
NUP62
IL4I1
ATF5
GSTA4
PYURF
PIGY
HERC3
THOC3
MUC12
ANKRD36
MRS2
OGDHL
ZNF638
MIA2
ACSF3
SIGLEC10
SNRPB2
RAET1G
SURF6
GCFC2
RFC1
ZNF770
EBAG9
COMMD1
CCT4
KIF16B
ORC4
MBD5
RBAK-RBAKDN
RBAK
TIGD1
EIF4E2
CTF1
BCL7C
TINF2
XYLB
CMTR2
ASCC3
KIZ
MRM3
GLOD4
ALG10
ADNP
ZNF341
ISLR2
MGAT5B
ALG10B
ZSWIM7
TTC19
KHNYN
CBLN3
KCTD5
NFKB2
PUM2
FSIP2
FAM177A1
NCKIPSD
ABT1
EEF2K
FOXJ3
MPHOSPH6
ZNHIT3
MTG1
GOPC
NPIPB6
SOST
LAMTOR5
ETV3
SNRPD1
DUS2
DDX28
PROCR
NOL11
DEXI
CLEC16A
HUS1
PDE6D
COPS7B
COX18
TMEM18
PRICKLE4
FRS3
HS1BP3
DIAPH1
C2orf88
BCAS4
ATP5F1A
RPL5
POLR2D
VTA1
NMBR
ROMO1
NFS1
GCA
COPS8
EIF3CL
EIF3C
SARAF
GPN3
FAM216A
PMVK
DHX8
MARCHF7
CEP68
PSMD3
KCNH1
NT5C
KRT8
PCID2
CUL4A
MRPL3
PYGB
UGGT2
PKP3
GNPNAT1
SRSF7
ARID2
STMN3
RTEL1
KCNK12
SLC25A21
CDC73
WTAP
SOD2
ZNF843
STEAP1
MYO1B
TCAF2
SPTLC2
EXOSC8
ALG5
USP45
GORASP2
ZFYVE9
CCNL1
BPTF
TRDMT1
DNAJC11
PCBP3
CCDC174
MRPS2
C9orf116
FCSK
NDUFS3
KBTBD4
EXOSC6
SAAL1
SPATA25
NEURL2
CTSA
PRMT2
MRPS5
PCK2
ATXN1L
DDX1
PLD6
THUMPD1
LTB4R
CIDEB
VARS1
RALGAPA1
GINS1
GMNN
ABCA5
DMAP1
ERLEC1
ASB3
GID4
CTSH
ATPAF2
DNAJC6
ZSCAN9
KIFC1
SLC13A3
STAG1
SUPT3H
YAE1
KPNB1
CYB5R4
CRYZL2P-SEC16B
LRRC71
NDUFC2-KCTD14
NDUFC2
ABCB6
SCAF11
RBBP5
NPPB
MTIF2
AURKAIP1
TRMT6
MCM8
RPS15A
NPIPB9
STK10
FAM149B1
ECD
RIOK1
CAGE1
FOCAD
KCNE1
BRF2
TEFM
FANCD2
ADGRG6
DLL3
TMEM230
MPHOSPH10
MCEE
SCGN
NCOA3
FIGNL1
LOC112694756
SIKE1
GJD3
TMED3
UNG
ALKBH2
LTF
PHF20
FBXO4
EIF2D
MND1
RPL18A
VAPB
HSPE1-MOB4
HSPE1
HSPD1
SPAG16
COMMD2
SEC62
LRRD1
TTI2
SMARCD2
PTMA
CMTR1
SLC25A51
PCMTD2
H4C11
RMDN2
LOC100287896
LIPT2
CNEP1R1
C1orf53
DCXR
SNAP47
JMJD4
UTP4
DERPC
CHTF8
ZC3H6
RBBP9
KDM8
DIABLO
TATDN3
NSL1
TPBGL
MRNIP
THOC1
CELSR1
PHF3
SLC7A6OS
PRMT7
RNF130
GGA2
GARS1
H3C12
H2BC17
H2AC17
MARCHF8
CCAR2
C8orf58
POLE4
ZNF212
RPS6
MRPS35
RPLP1
RPGR
TRPC1
ZNF165
TARS3
MRPL39
DNAJC19
RNF146
ACBD6
RPS15
TMEM106B
PCNA
DCP1B
GMDS
TPH2
FGFBP3
CCDC59
ARL8B
NANP
IARS1
FZD5
FMNL3
MAN1A1
CBWD2
LRRC57
HAUS2
SEZ6
HIBADH
MRPS23
NUBP1
PSMD6
MRPL58
NDUFAF6
COCH
CRBN
ACSL3
FBXO31
ZBTB45
SDHAF3
SGCA
FAM228B
TMEM41A
ZNF593
C1orf232
TMEM14A
TTC23L
SF3B6
MITD1
ZNF326
TMEM68
TGS1
GPN1
CCDC121
USP42
AFTPH
UBAP2
C17orf75
PBX3
PPP1CB
TMX1
RPS3A
SPRYD7
SNRPC
PSMC4
NUP107
VGF
PLA2G15
HDGF
GTF2H2C
FERMT1
AATF
SLC35F5
TTLL4
TTPAL
MAT2A
SRPRB
RWDD1
GRM1
COBLL1
LSM12
G6PC3
COPS6
MYBPC3
ATAD2B
DDX42
CCDC47
SLC25A40
DBF4
PGRMC2
NDUFAB1
NOL10
BIRC3
CHGA
CEBPE
TTC33
MFSD1
BCKDK
MRPL22
GEMIN5
CERS6
EIF2B3
FRMD3
DDX19B
DGAT1
COQ7
SERINC3
SRSF2
MFSD11
TXNDC15
ANAPC1
ACYP2
SLC25A13
UMOD
MAPK8
PITHD1
PSME4
PRKCE
MAPK3
COIL
ARL6
OXA1L
KLHL12
CUL9
MFAP3
FAM114A2
MAPK1IP1L
MTHFD1L
ANAPC11
ALYREF
DNMT3B
LSM2
PDCD4
LONP1
CATSPERD
P4HA1
ZNF248
NUDT15
H2BC5
H1-4
PCYOX1
LSM5
PTPN4
EPHX2
PTRHD1
CENPO
RSPH3
MTHFS
FANCL
CRYM
PGBD2
SOD1
HEXB
UGDH
FAM136A
RERG
RAD54B
UGP2
NDUFAF1
WIZ
VPS53
MLLT11
LLGL2
CDC42SE1
METTL15
KIF18A
SEC23A
RESP18
TCTN3
SLC24A1
INTS14
CALM1
RWDD3
HES6
WDSUB1
C6orf226
TCAIM
RCBTB2
HNRNPR
HERPUD2
RPAP2
GLMN
WDFY1
STT3B
TNFAIP8
SPOP
VPS33A
MBIP
SECISBP2
TXNDC9
EIF5B
CPNE8
BPHL
ARHGAP29
HECW2
POTEJ
TMEM169
PECR
FAM133B
KLHL20
TM9SF1
RPL37
TEX261
PSMD5
CHRM4
CCR4
C14orf93
VCPKMT
CPPED1
MORN2
DHX57
GOLGA4
RPL23
STK25
COPS7A
SMG1
FOXG1
TMEM170A
TEKT2
DUSP3
CFAP97D1
ADPRS
PTPRS
DHDDS
WRNIP1
MYLK4
ABCC5
USP40
RIF1
ERI1
KPTN
ABR
RTBDN
H3C3
H2BC3
FRG1
MTHFD2L
RARS1
TRAPPC8
LANCL2
EPB41L4B
DTD1
DNMT3A
SDCBP
GDF15
RPL38
HSD3B7
ZFP1
FAM187A
EFTUD2
CCDC103
SUMF2
TSN
RBM18
MRRF
STAM2
PPA2
FAAH
C17orf50
ATP5F1B
GEMIN2
ACAD9
BIRC5
SNAPC5
POLR1H
PDS5A
SNX13
CYTH1
CKB
CES3
ERCC5
MC5R
STEAP2
SLC27A5
NOCT
IFT88
SH3RF3
PELI1
SRSF6
TDRD7
H4C2
H3C2
FARSB
EIF4ENIF1
PIP4K2B
ZKSCAN2
UBAP2L
RAD21L1
NCBP2AS2
NCBP2
MAP2
GDF1
CERS1
C1orf43
KNOP1
IQCK
TBRG4
DEF6
DHRS4
FAM98B
ATRN
CLK1
CBX1
TMEM14B
YIPF4
MLNR
MTHFD2
KAT5
SENP1
PFKM
OAZ2
CFAP410
IFNAR1
FUS
NCK1
RNF43
AHCY
TMEM222
TRAK2
STRADB
LENG8
NDUFS7
EIF5A2
PCIF1
ROPN1L
RAB3C
DNAJC24
DCDC1
TIGD6
HMGXB3
SCG3
PDF
CCDC137
ADO
OSBPL8
ZP3
ECHDC1
CZIB
NOTCH2NLC
ADAM17
SLC30A6
THUMPD2
COX16
MET
ATR
HEY1
CDKN2C
FARP2
PFDN5
MYG1
RAB8A
NOXA1
NMRAL1
HMOX2
BLM
ALKBH3
SNX14
CCDC138
WDR43
TBL3
R3HCC1
TENT4B
H1-2
POMZP3
C12orf73
SFT2D3
IQCH
AAGAB
NCBP3
LRRFIP2
ZC3H15
C6orf136
SELENOI
ADGRF3
RBBP6
PMPCA
ENTR1
CLASP2
LEMD3
GGACT
AJUBA
GALK2
COPS2
FAM120B
TRMO
THEM4
PTEN
KLLN
CFAP43
ZSCAN25
ZNF385A
OXSR1
ING2
ORC2
TOMM22
DDX18
KATNA1
NUS1
TOP1
FNIP2
AGL
PSMD12
NCAPG
CEP83