ChIP-Atlas: Target genes

Potential target genes for DNMT1

Query protein: DNMT1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478479 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
DNMT1's Target genes

◢ DNMT1: Average

◢ SRX3148637: HBEC3-KT

◢ SRX3148642: HBEC3-KT

◢ SRX3148647: HBEC3-KT

◢ SRX3148652: HBEC3-KT

◢ SRX10478478: Hep G2

◣ SRX10478479: Hep G2

◢ SRX2424698: K-562

◢ SRX2424699: K-562

◢ SRX156110: NCCIT

◢ SRX156118: NCCIT

◢ SRX1021632: PC-3

◢ SRX1021633: PC-3

◢ DNMT1: STRING

FRG2C
NPAS4
IQSEC3
XKR7
FRG2
INSM2
MTRNR2L1
HTR5A
NKX1-1
DUX4
CPLX2
GLRA1
NTSR2
RAB37
FAM24A
CELSR3
LIN28A
CNOT3
BARHL1
STX16
LRRC59
CHGB
CCDC200
L1CAM
FAM227B
DTWD1
POTEH
MTRNR2L2
MSH3
DHFR
EIF4A3
MED23
SRRM3
KCNH7
CRYAA2
CRYAA
INTS12
GSTCD
OR2T1
GTF3C3
NUF2
NSFL1C
COL23A1
HECTD1
CCDC88A
CDIP1
SNAP25
RAD54L2
MRPL44
USPL1
HMGB1
DTD2
C14orf93
SMIM17
CDK5RAP1
POLR2C
TMEM242
NHLRC1
CASC3
DHRS4L2
TEFM
POLR3E
OPRL1
LKAAEAR1
EPHA10
GOPC
HMGA1
ABCC6
RANBP3
MTF2
KCNK12
MAPK8IP2
SCRT2
WDR36
PLEKHM3
SIGLEC10
TMEM106B
KIAA1586
H4C12
FRA10AC1
ENOSF1
METTL15
KIF18A
LEMD3
WASHC1
CRNKL1
CFAP61
RABGGTA
NDUFAF5
ESF1
RSPH3
IPO4
RTBDN
TBC1D19
HEATR5A
SLC25A21
MRPL40
HIRA
LRRC37A3
ANKRD36
DDX1
FERMT1
PHF3
NRL
DCAF11
PKP4
CCDC148
CCDC92B
GTF2H2
GTF2H2C
METTL9
PTPRS
NBPF1
SPOP
STX18
GTPBP6
TIGD1
EIF4E2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TRIP4
NUP54
EPN1
CACYBP
GSTA4
AATF
GMCL1
MTMR2
SAR1B
ZSCAN30
RPL5
TSEN15
ICE2
AAR2
ZNF337
TMX4
POLE4
WDR35
PET117
KAT14
PDE6D
COPS7B
MFF
OSGIN1
RFC1
TTC30A
PDE1C
AHI1
SCRT1
CBWD1
ZPBP2
IKZF3
HES3
ALKBH3
UNC80
HDAC2
RPS7
SNRPB2
LINGO1
SLC44A1
LHFPL5
HDAC4
SLC35F5
PCNA
SNRPB
ANKRD36C
SCAND1
NDUFA12
EIF2S2
MRPL21
IGHMBP2
PLCB1
L3HYPDH
JKAMP
RANBP2
ACTR5
MNAT1
HM13
MCUR1
DCLRE1B
AP4B1
SURF6
ZNF770
GORASP2
JPH4
TACO1
NME1-NME2
NME1
PMVK
CFL2
GRAMD1C
MRS2
SMIM26
NFAT5
RAB5IF
PYURF
PIGY
HERC3
SAAL1
DCP1B
TTLL4
POTEJ
NDUFS3
KBTBD4
RGPD8
RGPD6
RGPD5
CWC25
ACIN1
ZNF23
NCOA5
C14orf119
TBC1D13
PCID2
CUL4A
ANKEF1
ERRFI1
MRPS23
SDHAF3
GDAP1L1
MRPL3
SEC23A
PHOSPHO2
CCDC173
PKIG
ERN1
PRMT5
ALG10
AGPS
FTCDNL1
FANCD2
NUBP1
DCP1A
NAT10
SST
GTF2H2C_2
DNAJC6
PINX1
FAM110A
CTF1
BCL7C
MOB4
SNX14
DNAH14
MYT1
ANKAR
THOC3
HSPE1-MOB4
HSPE1
HSPD1
ZCCHC7
GOT2
C2orf69
CDC73
SMAD2
ZKSCAN8
PIGF
MCM9
CRIPT
BRMS1L
ADNP
FSIP2
VWC2L
OPRM1
FITM2
TCTE3
ERMARD
TTPAL
WRNIP1
MYLK4
RNF141
SETD9
ASNSD1
ASDURF
HEATR1
FANK1
CHEK1
USP30
TUBGCP3
TMEM169
PECR
PELI1
ORC2
SVOP
MARCHF4
MRPL22
GEMIN5
RPL37A
HINT3
SALL4
H4C15
H4C14
PLD6
SGCA
ARFGAP3
C17orf75
FAM133B
GGACT
ERCC4
GPCPD1
AMMECR1L
EBAG9
DLL3
NOL7
MRTFB
TAMM41
SPAG16
FAM228B
ZFP1
TOMM22
PFN4
TINF2
MARCHF7
WTAP
SOD2
NPPB
ATAD2B
TNFRSF21
NPDC1
IQUB
ENTPD2
TMEM248
FAM177A1
NPIPB6
PYGB
THUMPD1
ZNF212
POLR2J3
RBM45
PDE11A
PARL
CLTC
POLR1B
DCAF10
PEX3
ADAT2
PMS2
AIMP2
NCKIPSD
SPATA25
NEURL2
CTSA
COQ7
DDX18
PIAS1
SEC14L1
ZNF843
PRMT2
CCDC138
TRIM44
SNRNP48
HEBP2
CERS6
KATNA1
N6AMT1
CALM2
ATIC
TRAF6
RAG1
VPS36
CKAP2
UGGT1
DSN1
FAM104A
POLR2D
ZC3H6
RESP18
MTERF1
XKR9
LACTB2
SLC39A13
TARS3
DDX42
CCDC47
CEP295
SLC25A40
DBF4
SRSF6
MMADHC
SLC30A3
DUS1L
ABT1
P4HA1
TCTN3
MBIP
TM9SF1
TDRD7
WDR43
FBXO33
MKS1
PMS1
ORMDL1
PPP4R3B
DNPH1
ZNF440
MTRNR2L8
MDP1
CHMP4A
AP3S2
UGGT2
SERINC3
SLC24A1
INTS14
NUS1
FAM83D
SPTSSA
DRG2
EXD2
KIAA1841
TTC4
MRPL39
MTHFS
CTNNB1
TMEM237
GDAP1
COMMD1
CCT4
EFR3A
ABCC5
NET1
PSMF1
VRK2
GMDS
DSTN
BFSP1
MARS2
PDS5B
ATP23
SECISBP2L
NFE2L2
LUC7L
USP40
H3C3
H2BC3
IL1RAP
UBE2V2
POLR3F
DZANK1
MRPS31
CLUAP1
C16orf90
TVP23B
OGDHL
TMEM230
RAD50
L2HGDH
DMAC2L
MAP4K5
ATL1
CCDC107
ELOVL2
COMMD2
SFR1
ARL6IP1
MMP24
ATP5F1E
COX18
VTA1
NMBR
TMEM41A
SDR39U1
ESCO1
GTF3A
ATP6V1B2
SLC35A3
MPHOSPH10
MCEE
SLC7A6OS
PRMT7
PARD6B
XRN2
SGF29
MRPS24
CCN2
SREK1IP1
SLC36A4
PTPRN
CWC27
PTMA
FUS
OSBPL8
EVI5
DCAF8
PSMD7
ZFYVE9
MINPP1
DNAJC19
FMNL3
PBX3
CTDSPL
TCFL5
IFNAR1
MIPOL1
ERCC6L2
CEP68
FAM187A
EFTUD2
CCDC103
KNOP1
IQCK
NT5DC1
CCT2
TERF2
CC2D2B
DHX40
PHF20
RTTN
ANKRD36B
CNTFR
FAM162A
CCDC58
UBE2D3
CISD2
TRMT61B
ZMPSTE24
LTB4R
CIDEB
TPH2
PSMD6
SNX5
MGME1
PRKAB2
CHD1L
IFNGR1
BAZ1A
RIPK1
EXOG
NOC3L
TP53I3
ROMO1
NFS1
CMTR1
VCPKMT
GFM1
COQ9
CIAPIN1
BAZ2B
HUS1
EEF2K
VARS1
PGRMC2
TVP23C
FNIP1
CHMP7
ADK
CDC27
MICU2
DBT
B3GALT1
ACTL6A
ZNF391
TMA16
RALGAPA1
GINS1
CALM1
NCK1
ZNF133
H3C10
H2BC14
H2AC14
E2F6
STRN3
CPE
AP4S1
AEBP2
SNX17
EIF2B4
DHRS13
CSTF1
AURKA
CCNL1
FANCL
RWDD3
KDM3A
UCHL5
RO60
PGBD5
DPY19L4
HBQ1
HBA1
STAT3
LDAH
RNF149
CDKN2AIPNL
ZNF341
ZSWIM7
TTC19
BPTF
NFKBIA
AIP
AGFG1
HEXA
NUP153
NHEJ1
DYNC1I2
SCFD1
RBBP5
GCA
RPS6
XPO5
POLH
C15orf61
ZNF451
SRSF1
SNF8
ZNF343
ATXN2L
KMT2C
XYLB
CLTB
PPIP5K2
KAT7
GIN1
C2orf73
EIF2AK3
BAIAP2
SOST
FBXO4
RNF146
ZNF593
C1orf232
PPP1CB
HES6
TBRG4
RBL1
TMEM186
PMM2
COMMD10
RSL1D1
AMZ2
TMEM18
PKP3
TRDMT1
DEF6
TBL3
ERMP1
SEH1L
RPTOR
SEC31A
TK2
CKLF-CMTM1
CKLF
ZNF621
STAMBP
GCFC2
KIF16B
DUS2
DDX28
COPS8
TMEM14A
WDSUB1
CPPED1
USP14
STXBP6
STEAP1B
SORD
MTCH2
TMX1
NDUFAB1
ZNF248
SUMF2
ZP3
HDDC2
BAG2
DNAJC11
AURKAIP1
C6orf226
TSN
NMI
FAM76B
CEP57
TRIQK
TIMM22
GGH
CDYL
CDKL1
BCL7B
MRPS5
NUDT15
LPIN3
TPD52L1
SUGT1
SLC25A51
PCMTD2
RBBP9
MAT2A
STAT1
COQ2
NAA20
ITGB3BP
EFCAB7
BBS5
MRPL19
ABCF1
SNRPG
ITGB1BP1
CPSF3
SPATC1L
ZSCAN9
TRMT6
MCM8
RPS3A
SRSF2
MFSD11
ERCC5
RSAD1
AGK
ITSN2
USP17L15
SSR3
SCNN1G
NDUFC2-KCTD14
NDUFC2
FGFBP3
ARL6
RNF43
ERBB2
PSMC2
DNAJC2
LRRC58
CDPF1
ZFP37
OXSM
NGLY1
EXOSC6
MRPL58
PNPT1
SLC25A28
THNSL1
DNAJC9
ZMAT5
UQCR10
NUDCD1
NAGK
BUD13
EFCAB13
GMNN
RPS15A
MRPS35
SECISBP2
DHRS4
NAE1
FAM98A
ETFDH
C4orf46
SDHAF4
FAM53C
CDC25C
ZBED9
TUBG1
RETREG3
G3BP1
KIFC1
RNF130
GGA2
CRYM
RPL37
RIF1
H4C2
H3C2
FAM98B
EPM2A
PPP4R3A
GINS3
H2AC4
BNIP1
RRM2
VSNL1
AFF4
PTS
ZFYVE27
VPS13A
TDRKH
SVIP
PRICKLE1
CCNDBP1
AVEN
PSMG1
CMTR2
ABCB6
SRPRB
RBM18
MRRF
ZNF25
UBR3
METTL5
OR6B2
NDUFA10
ABCA3
ASCC3
PSMD3
H4C11
MAN1A1
OXA1L
MRPS18C
HELQ
HBS1L
TASOR
HPS3
TRIL
CSE1L
PCOTH
MIPEP
C5orf51
NOMO2
RICTOR
POLR2F
C22orf23
IRF9
LAMP1
LATS1
MORN2
DHX57
ERI1
R3HCC1
CRB1
PCNX4
CALU
FEM1B
ZSWIM9
SLC30A9
SAMM50
PDHB
NFAM1
LIG1
BCKDHB
SF3B5
ABCA5
EXOC6B
PROS1
SRXN1
DPY30
ZNF780B
CLVS1
CD302
CCDC68
STARD4
SIRT5
PSMD8
PHF1
RMDN2
RPLP1
GALK2
COPS2
PPP1R3D
FAM217B
UTP18
MBTD1
RBKS
BABAM2
FAM8A1
UBOX5
HAUS4
FASTKD5
MOGAT1
KANSL3
FER1L5
STEAP1
SHOX2
RSRC1
CLU
NAPB
BIRC2
PFDN4
TMEM70
ELOC
GRB14
FER
SMAD5
BCAT1
SMARCD2
SMIM8
RRN3
RHOT2
C16orf72
PCK2
PGBD2
FRG1
FAM120B
KIAA1958
C9orf147
C10orf88
FAM161B
COQ6
TPGS2
PDCD11
ATP5MD
MIS18BP1
CLGN
GPR135
ELOA
DBR1
SF3A3
NOB1
MUC12
GARS1
KLHL12
RBM28
RAB18
ZNF292
BOLA3
F5
DARS1
ERCC3
UNC93A
RRP1B
HSF2BP
MYO1B
EIF2D
CCDC59
AHCY
G2E3
SRP54
LRP12
PRORP
PPP2R3C
MRPL48
TMEM179
SH3GLB1
SEC24A
PRKAR1A
NDUFS4
LSG1
EEF1AKMT1
CAAP1
ATP5MC2
SCGN
CBWD2
TOP1
PPY
GTPBP8
FRS2
PPME1
C2CD3
TMEM223
TMEM179B
DPH6
NFKBIZ
HARS2
HARS1
TBC1D32
SRBD1
LYSMD3
RNF103-CHMP3
RMND5A
ATXN1L
TTC23L
MAGOHB
ZGPAT
PPAT
PAICS
ARFRP1
ANKRD31
CCDC43
BCAR1
MTA3
KCNG3
RGPD3
LCLAT1
AQP11
NCOA3
TEX261
PDCD6IP
DNAJC10
ARL4D
ALMS1
RBM48
PEX1
MXD1
MLLT10
PTDSS1
MTERF3
PSMA6
NOMO3
HNRNPD
UTP11
RELCH
PLAG1
PIGN
PDE5A
NOMO1
N4BP2
DYNLT1
CHCHD7
SLC13A3
H3C12
H2BC17
H2AC17
NDUFAF6
TTI1
RPRD1B
SOD1
ATRN
MKNK1