ChIP-Atlas: Target genes

Potential target genes for HOXA3

Query protein: HOXA3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478483 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXA3's Target genes

◢ HOXA3: Average

◣ SRX10478483: Hep G2

◢ SRX10478484: Hep G2

◢ HOXA3: STRING

DHX36
NPAS4
TVP23B
NOC4L
DDX51
IQSEC3
CWC25
TBL3
RNF151
POT1
AP2B1
TOR1A
APTX
STK38L
SPTY2D1
PRPF38A
ORC1
MRM3
GLOD4
XKR7
CAMLG
PRMT9
UBA52
ZNF721
PIGG
MAGOHB
RTF2
CCDC86
TRIAP1
PDE4A
SF3A1
CCDC157
RRM1
KAT7
KIF15
KIAA1143
NBEAL1
S100A13
CHTOP
DDX18
COPS8
HINT3
MORN4
FANCD2
ZNF593
C1orf232
C9orf72
NUP153
NARS1
MRPL55
SSNA1
ANAPC2
HOMER1
BLOC1S5
RNF166
CTU2
LEMD2
SHLD1
ZNF547
TRAPPC2B
CCDC174
DDX19A
GALNT11
MAP3K13
IDH3B
ZSWIM7
TTC19
SLC30A9
ENOSF1
RRNAD1
ISG20L2
BRAF
HAUS5
RBM18
MRRF
ILRUN
ZNF268
PRKCSH
CCDC151
COX18
MTURN
UBR4
TRMT61B
ING4
SCYL3
PPIG
AIG1
RNF139
PRRC2C
SLC25A3
MVK
RANBP2
YTHDC1
TSSK6
NDUFA13
OGDH
SZRD1
ESYT2
WFDC3
DNTTIP1
SRRD
HPS4
TMEM91
B9D2
ZNF548
STX4
MAGOH
CATSPERG
XRCC6
DESI1
CDK11B
METTL3
ANAPC10
ABCE1
AFTPH
RCE1
CSTF1
AURKA
GTF2H3
EIF2B1
RALGAPA1
MMADHC
CDC5L
PRR14
C16orf91
RLF
MFF
LDAH
SCLT1
C4orf33
VPS37B
TSSC4
COX8A
MCMBP
IPPK
FAM149B1
ECD
TRMT10C
NAF1
CCNT1
CRADD
TMUB2
TTLL11
NUP214
PSTK
SSU72
YTHDC2
PRPF38B
SF3B5
CCDC59
RPS27
RAB13
PEF1
RPF2
ZBTB40
TXNDC15
ESCO2
LRRC59
PCNX4
HECA
MIGA1
RPL9
LIAS
KIFC1
WDR53
FBXO45
ELL2
JOSD1
GTPBP1
CDK11A
OPA3
ATP5MC1
KAT8
ZBTB11
TBCCD1
DNAJB11
MAP3K2
HIRIP3
USP36
SKIV2L
NELFE
ZZEF1
CYB5D2
SIK1B
SIK1
TM9SF4
FAM200A
PSMD8
RPA2
RPL12
LRSAM1
NUP133
ZBTB21
TRIP4
ATP9B
ZC3H11A
ZBED6
VPS16
PCED1A
GHITM
RANBP6
CCNL1
NECAP1
INSM2
RBKS
BABAM2
USP31
MORF4L1
ATF1
PARP2
COX7A2
NUS1
JOSD2
ASPDH
MCM10
PPIL4
RFC1
RIF1
AP1G1
TRMO
NOLC1
RBM42
TPT1
H2BC15
H2AC15
ST7L
CAPZA1
BDP1
GTF3C6
XPO6
ELOVL5
RPL21
IMMP1L
ELP4
RPL24
E4F1
BIRC2
THUMPD1
MRPS10
TUFM
SH2B1
PTBP1
ATG16L1
GTF3C3
NCOA5
SNRPB2
RAD23A
COQ7
CYCS
CMTR1
SEC23B
ADGRG3
CBWD2
SPRYD4
AARS2
RPS7
CCNH
FAM177A1
CBWD1
VPS35L
OXSR1
TBP
PSMB1
THAP6
IMPDH2
KPNA5
HACD2
ARG2
ATAD3B
PPP1R15B
NDUFS2
ADAMTS4
C5orf15
PELP1
N4BP1
LIN28A
ZNF26
N4BP2L2
ZGRF1
LARP7
SAR1B
SSR4
IDH3G
CDK5RAP2
ATP6V0A1
ANGEL2
FEM1A
SELENOK
SNU13
WBP1
INO80B
CCDC150
TOMM6
RPRD1A
TFCP2
KDM3A
POMZP3
PGBD4
EMC7
LONP1
CATSPERD
AHCYL1
SDF4
B3GALT6
MBD4
IFT122
SLMAP
RBM12
CPNE1
SCFD1
TUBGCP6
POLR1H
CDK5RAP1
PSMF1
NOP9
DHRS1
NDUFB5
MRPL47
FBXO38
BAX
THAP4
ATG4B
CELF1
CSNK1G2
TMEM230
PDE7A
ZNF764
STK19
DXO
ZNRD2
FAM89B
TMEM101
MRPL21
IGHMBP2
RACGAP1
NUP35
ZNF23
IMP4
CCDC115
PEX12
ZNF501
OSBPL11
UBE2J2
RPL23
ZNF426
NOP58
ZNF300
CSDE1
DHDDS
SF3B6
FAM228B
TOR1AIP2
TOR1AIP1
MZF1
GZF1
MAP2K1
SEPTIN7
IWS1
TTI1
RPRD1B
JARID2
ZNF76
STX16
SRSF5
RBM25
SLC35F5
ZNF274
MMUT
CENPQ
ZDHHC7
NEK1
ERLIN2
PAK1
TPGS1
CCDC124
WDR33
MFSD13A
WDR7
DNTTIP2
RBSN
USE1
NCAPH2
LMF2
C1orf174
PSMB5
THOC1
LRRC37A3
HTATSF1
HES4
ATXN1L
GTPBP10
ZC3H6
TRMT44
ACOX3
PPP2R3B
EFCAB2
DYNC2I2
TVP23C
BNIP1
TMEM79
SMG5
MRPL20
COQ9
CIAPIN1
NAT10
ECH1
WARS2
OTUD6B
OXA1L
NHLRC1
LSG1
HAT1
DHX40
HOOK2
VTA1
NMBR
RRP1B
HSF2BP
ZNF507
NME1-NME2
NME1
SECISBP2
DCP1A
STRAP
FAM24A
RFX1
RPL27
NDUFV1
MTF2
PTPN4
PRORP
PPP2R3C
GOLPH3
GUK1
OR6B2
NDUFA10
EXD2
TIMM10B
ARFIP2
SETD3
CCNK
ARPP19
DIABLO
TRAK2
STRADB
SLC17A5
ANAPC11
ALYREF
CBWD5
CBWD3
ARIH1
RPS6KB2
FARSA
CALR
EIF4A1
ZNF2
MRPL58
NGDN
SLC39A9
ERH
NUDT18
PPWD1
CENPK
RNF40
CCDC189
TCTE3
ERMARD
POLR3D
ZNF484
LYRM1
DCUN1D3
PREPL
CAMKMT
RNMT
FAM210A
DUS3L
RPL31
RAB22A
ZNF747
GART
MFSD14B
MRPL2
KLC4
NUMA1
LRTOMT
AP5S1
SNRPD1
PURB
SRCAP
LOC730183
ACTR5
SNRPC
UBE4A
OXNAD1
DPH3
KCTD5
KNL1
USPL1
HMGB1
STAU1
DDX27
AASDH
ARMC5
NRF1
FDXACB1
C11orf1
TDRD1
CCDC186
RAB5A
EFHB
C2orf49
CUEDC2
CACYBP
DCTN4
ZFX
C1D
ESCO1
CTNNB1
PXT1
KCTD20
ERCC5
FASTKD1
VCPKMT
TIGD1
EIF4E2
TTC1
SECISBP2L
CHFR
YTHDF3
TEAD1
CTCF
ENSA
ARF4
DDX42
CCDC47
PPP1R21
PRRT2
PAGR1
MVP
LCMT1
HPS5
GTF2H1
SUMO1
MFSD14C
RPL13A
RPS28
NDUFA7
CEP350
RABGGTA
RPS11
CENPW
CCAR2
C8orf58
THAP1
PPP2CA
SUPT5H
TFIP11
TAB2
TMEM208
LRRC29
MRPL44
NDUFS5
LRRC57
HAUS2
DLD
CLK1
TBC1D22A
RAB37
OST4
PIGU
VPS33A
UTP4
DERPC
CHTF8
ACAD9
ZNHIT2
FAU
MKS1
IPO11
USF1
TMEM259
CNN2
R3HDM2
INHBC
MFN2
INTS12
GSTCD
ADK
NKX1-1
ZFPL1
TMEM262
CDCA5
FRA10AC1
PRSS27
SLX4IP
MKKS
NDUFB6
STRIP1
TMEM199
POLDIP2
SPG11
TAPT1
ZCCHC9
RAB5IF
STX18
CHGB
TMEM131
NUF2
SPTLC1
MRPL52
TEKT2
ADPRS
RFC3
NSMCE3
SAP30BP
RECQL5
XRN2
CCDC71
NUFIP1
GPALPP1
HTR5A
ZNF337
PINX1
TDRD7
SAMD10
PRPF6
PSKH1
SNX5
MGME1
LUC7L3
PEX3
ADAT2
PDE6D
COPS7B
NR3C1
CHD2
UFC1
RPS13
THAP9
SEC31A
SETD4
AKAP9
POLR2C
EXOSC9
RFC2
FLNA
EMD
CDIP1
IFT172
FBXL19
NFX1
SNF8
TBC1D15
CKS2
RHOT2
MED23
NDUFAF5
ESF1
MAP1LC3B
FBXO31
IPO4
ACTR3
ALKBH3
BCAS2
ZNF614
PABPN1
EIF1
GARS1
PMPCA
ENTR1
CHCHD5
LTV1
ABT1
MTHFSD
CLASP2
SARAF
EAPP
ZSCAN9
MRPS18C
HELQ
NAA60
DUS2
DDX28
STARD3NL
UBAP2L
C1orf43
ADAT1
EIF3H
NDUFS7
MTIF2
SRSF11
LRRC40
RPL14
MANF
NSFL1C
PHF20
MRPL4
HERPUD1
COMMD1
CCT4
EIF1B
CNOT1
TRIM52
NDUFAB1
PLEKHM3
PSMB2
CBWD6
MBIP
LRRC8A
KYAT1
DNAJC11
TMEM198
CHPF
ANKRD17
UQCRQ
GDF9
MRFAP1
DDX1
SRPRA
WSB1
KIAA0895L
GAN
TTC16
PTRH1
RAF1
ZNF165
CIPC
WDR75
ETF1
MRPL53
DDX46
TSR3
GNPTG
ATAD3A
OVCA2
ZNF384
KMT2E
TPD52L2
ABHD16B
ELOB
NDC80
METTL4
RMDN3
CYSTM1
CSNK2A1
NDUFA12
EPN1
CAAP1
PRPF8
TMEM128
PRPF4
CDC26
ZNF606
YWHAE
DUS1L
MRPL3
FCF1
AREL1
AAR2
OPA1
DPAGT1
C2CD2L
SNX13
ADPGK
RRP1
COMMD2
LAMTOR5
MVB12A
NRBF2
NUP42
WTAP
SOD2
FOSB
TUBB
MDC1
GOSR1
RPP14
HTD2
RRP15
SLC35E1
KPTN
PPP4C
C2CD5
FAM131A
TBC1D17
AKT1S1
TNRC6A
MUL1
CNNM2
TP53BP1
DHX15
CREM
TTC17
MED9
UBAP1
TRUB1
SLC25A44
LMLN
IQCG
HNRNPA3
TRMT5
SLC38A6
CEBPZ
TEX46
KDM1A
PGS1
BBS1
EDC3
PFAS
LY6G6F-LY6G6D
LY6G6F
ABHD16A
RPS3
NKIRAS2
DNAJC7
COMMD9
CCP110
TMEM242
PCNP
SF3A3
H4C12
NDUFS3
KBTBD4
SMPD4
MZT2B
CPEB4
WASHC5
NSMCE2
RALGAPB
MFAP3
FAM114A2
TUT1
IFRD2
UQCRB
FBXW2
TSPAN31
AGAP2
FBXL18
KHDC4
UBXN4
ZDHHC3
EXOSC7
UCHL5
RO60
NSRP1
ZNF394
ZKSCAN5
YIPF6
TMEM237
RNPS1
C12orf43
ATRN
FAM227B
DTWD1
LSM5
AVL9
NCBP2AS2
NCBP2
NOL7
TFPT
PRPF31
LEMD3
TPM4
RPS8
RRN3
SIRT2
NFKBIB
BTF3
PLD3
C19orf47
MIA2
COQ5
C19orf53
UBE2H
WDR74
PTEN
KLLN
MED25
FUZ
SURF6
PHB2
PTRHD1
CENPO
DARS2
CENPL
SRSF3
CLUAP1
C16orf90
PPP4R3B
EIF3E
TAB1
EXOSC6
TAF11
ANKS1A
PGAP2
SEC23A
CPPED1
NOL11
LCLAT1
FAM187A
EFTUD2
CCDC103
SF3B4
ANKRD13C
MANBAL
ZNF524
FIZ1
OXSM
NGLY1
RABGEF1
UQCRFS1
GLRA1
FOXJ3
ROMO1
NFS1
USP42
SERP1
EIF2A
NOL10
TERF2
PPP4R3A
MRPS23
ABHD12
MIB2
RPS21
SMIM26
MZT2A
SEC14L1
NOP53
WRAP53
TP53
METTL2A
ZSWIM6
EXOSC2
MDP1
CHMP4A
STK16
GLB1L
SCAF8
CPLX2
TM9SF1
SMC3
ZNF19
SLC25A21
WIPF2
UBE2M
CHMP2A
POLR1F
SPHK2
RPL18
FAM83E
GOLGA1
NACA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
IBA57
USP7
BCL2L13
BORCS7
CCDC107
SASS6
MAPK8IP3
LYSMD3
SMIM17
AP3S2
ZC3H13
RCAN1
STAT3
TMEM217
TBC1D22B
UTP15
ANKRA2
PSME3
SHOC2
BBIP1
QTRT2
CCDC191
SRRM1
PDE4DIP
C2orf69
SEC62
PFDN2
NIT1
MRPS35
KLHL12
GOPC
GOT2
SNAPC5
PET117
KAT14
NUP155
THADA
TXNL4B
DHX38
NECAP2
MRFAP1L1
POLE4
RPL5
SNRPB