ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478563 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◣ SRX10478563: Hep G2

◢ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

NPAS4
XKR7
IQSEC3
LIN28A
FAM24A
INSM2
CELSR3
KCNH7
NKX1-1
HTR5A
GLRA1
RAB37
SMIM17
MTRNR2L2
MSH3
DHFR
EPHA10
L1CAM
DLGAP3
MTRNR2L1
CPLX2
MTRNR2L8
BARHL1
SST
CHGB
RTBDN
SCRT1
SNAP25
MYT1
GDAP1L1
SLC12A5
NPPB
HS3ST2
FRG2C
MAPK8IP2
ANK1
SIGLEC10
RANBP3
TMEM181
PTPRN
SCGN
LHFPL5
SLC39A3
CHRNB2
SEZ6
HES3
DUX4
DNAJC6
PGBD5
KCNK12
HPCA
CCDC92B
NTSR2
CHRM4
CABP7
UNC80
OGDHL
AP3B2
SPOP
RBM28
ATCAY
NRSN1
PTPRS
CDK5R2
SRRM3
ZFYVE27
CHGA
SCAMP5
GRM1
PIK3R3
GPR78
RNF130
KLF11
GCFC2
VWC2L
RPF1
MMP24
SCRT2
CEMIP
PLEKHM3
VGF
PDE1C
PRMT8
CDIP1
PTMA
HMGA1
SEZ6L2
ASPHD1
PCDH8
ST8SIA3
SLC7A6OS
PRMT7
PMS2
AIMP2
UGT1A1
KCNH6
HHATL
HTR1A
TMEM179
STMN3
RTEL1
SCG3
CDC16
LEMD3
PDE4C
CCZ1B
MFF
POU4F3
LSM12
G6PC3
ZNFX1
KATNA1
GTF3C3
SPATA25
NEURL2
CTSA
SLC18A3
CHAT
CTNNA2
CYB5R4
S100A8
LOC112694756
NEUROD1
SLC25A21
GPR6
MARCHF4
USP30
SVOP
PCNA
DLL3
KDM3A
HDAC2
NME1-NME2
NME1
NDUFAF1
PET117
KAT14
CENPA
PTDSS1
MTERF3
INTS5
SNTG1
HEATR5A
SNRPB2
RFC1
H4C12
CRH
SRSF2
MFSD11
GPR158
RESP18
SAYSD1
NPDC1
MNAT1
AATF
EPM2A
INA
E2F6
FBXL16
SNRPB
N6AMT1
NMS
TMEM107
GOLGA8A
PRDX1
DTD2
FGG
EVI5
DDX1
ELL2
UTP11
SLC7A14
CPNE4
DNAJC11
LRIF1
GRIA2
TPH2
SCIMP
HDAC4
SPINK1
HEXD
HRH3
PSMD3
MRPL39
SIRT4
H4C3
H1-6
STK25
CCNC
CDCA7
ABCA3
SCFD1
MAT2A
DHDDS
ARFGAP3
WDR74
AKAIN1
PRMT5
TOMM22
RPL31
PAQR4
KREMEN2
POLR2J3
ZBTB4
SLC35G6
POLR2A
SPR
SRSF6
IKZF3
ZPBP2
VPS29
RAD9B
STAT3
WTAP
SOD2
TOMM5
DNER
CTDSPL
FAAH
TCFL5
THOP1
SGTA
H4C11
IRF9
PMVK
TK2
CKLF-CMTM1
CKLF
GLS2
KCNB1
RNASEH1
UNC13A
PCSK1
XKR4
SLC6A5
EGR4
TIGD1
EIF4E2
PEX3
ADAT2
PDHB
INSR
ANKRD34C
SLC45A4
HES6
GTF3A
FEM1B
SLC37A4
WDR36
CSTF1
AURKA
SNX17
EIF2B4
NUP54
CCDC88A
DHRS2
INTS12
GSTCD
PTPN6
C12orf57
RABGGTA
TRIM67
NXF1
TTI2
ID2
SEC14L1
AKAP11
RRP1B
HSF2BP
PCBP3
RAD50
H1-2
NDUFAF5
ESF1
DRG2
TUBB3
MC1R
METTL15
KIF18A
EBPL
TMC7
CDK5RAP1
ANKRD36
FMNL3
TAB1
PRKDC
MCM4
CLUAP1
C16orf90
ARL6IP1
HBQ1
HBA1
HCN2
SF3B6
FAM228B
ACTR3
SKOR1
GET4
KIAA0895L
EXOC3L1
POLR3D
LCLAT1
STX16
MED23
OPRM1
AP3S2
ZC3H7A
CPQ
EIF3B
CTNNB1
TTC26
FRG2
GMEB2
GJA10
NSFL1C
SRP19
AARS2
GINS1
WDR45B
BSN
KANSL3
FER1L5
ZNF473
VRK3
TINF2
GPRIN1
ACTL6B
CCDC107
TEFM
RUNDC3A
SMPD3
TSFM
C14orf93
GGACT
GINS3
TSEN54
CASKIN2
HLTF
CNPY3
SMARCD2
RRBP1
LMCD1
SNRPD1
STX18
TMEM186
PMM2
FAM237A
RPL27
SPAG4
CERS6
RUSF1
PBX3
RAB11FIP4
BAIAP2
CLVS1
BRINP1
MRPS15
HMGN3
NR1D1
FAM187A
EFTUD2
CCDC103
PRLHR
COG7
UGP2
VPS25
UNG
ALKBH2
SEH1L
ACSL6
FAM177A1
RPS6
ZCCHC7
ABCC6
MLXIP
C4B_2
C4B
TNXB
MEST
MTF2
IPO4
POLE4
TBC1D13
LRRC37A3
ZNF165
CLN3
APOBR
ZSCAN12
SLBP
PHF20
NSUN5
SAMD10
PRPF6
DGAT2
PSMD5
PTP4A2
SLC35A3
AXIN2
ZNF23
RIOK2
FN3K
UBE2Q1
EIF4A2
YTHDF1
RPS7
BMS1
FAM227B
DTWD1
TEX14
RAD51C
CPNE9
H3C3
H2BC3
PCSK9
ODC1
SDHD
NOP14
GRK4
GARS1
CTXN2
HSPA1B
PCK2
NRL
PXMP4
RSPH3
HHIPL1
CCDC85C
ITPRID2
NCBP3
RAB10
MRPL58
LRP2BP
TRPM8
ANKRD37
RPL10A
RNF103-CHMP3
RMND5A
ZNF783
NDUFAB1
TIA1
LTV1
MED31
C17orf100
RBBP5
H4C4
REX1BD
DHX40
WDR35
IMPDH2
GRM2
SAR1B
GGA2
NUF2
TRIM44
COMMD1
USP7
TP53RK
SLC13A3
EZH1
AURKAIP1
FASTKD2
CTF1
BCL7C
EPB41L4B
H3C12
H2BC17
H2AC17
MRPL21
IGHMBP2
SMIM12
STARD13
LRRC59
DHRS4
MFAP3L
TNFAIP1
IFT20
LTB4R
CIDEB
SLC25A10
CCL16
MTIF2
SNAP47
JMJD4
ZNF624
NUS1
GRIN1
MRPL3
LRP6
POLR3E
HAL
USH1G
OTOP2
CMTR2
SPHK1
PSMF1
NCAN
DPP10
PGRMC2
R3HCC1
ANKRD40
DAGLA
BICDL1
NDUFS7
RHOB
PRR3
GNL1
VARS2
DCLRE1B
AP4B1
KIF18B
FUS
NOC3L
TMEM268
LDAH
DAXX
TBL3
OSBPL6
TAF6
CNPY4
EBAG9
TRAPPC6B
TAF5
PNN
MRPL44
DLX2
SOGA3
PDCD2L
NEU1
SRARP
SLC35G2
PDE11A
RBM45
MRPL45
RBL1
CALM1
USP14
TOB2
MAP1LC3B
FBXO31
ARL14EP
ATP5F1E
SYNJ1
KIZ
ITPA
DDRGK1
C6orf136
CEP295
HSP90AB1
SLC16A3
LANCL1
CPS1
RRN3
LTB4R2
TM2D1
SLC7A6
TM9SF4
COPS7A
TOMM34
VPS16
PCED1A
G2E3
FAM98B
ACAD9
ESYT3
PPY
EAPP
RPS2
RNF151
GLS
AP1AR
TOR1AIP2
TOR1AIP1
C5
KCNH4
CNTRL
FAM163B
ACTA1
DRAM1
PEX5L
GRB7
CDH23
PSME3
ZNF292
CITED2
MRPS10
SHF
LONP1
CATSPERD
POLR2J
C8orf37
CEACAM5
CCDC200
RGPD2
RGPD1
TATDN3
NSL1
TBCD
KCNC3
OSTM1
RPL13
NOB1
RGS20
CCDC83
ADNP
CYP21A2
POLDIP3
SLC25A36
MYORG
C9orf24
RPLP0
NANP
RBM34
UQCC2
SCAND1
ATR
POLR1H
DIMT1
VAMP5
TRIM33
ANO10
ABHD5
SNF8
PTGES3
NHLRC1
POLR2C
LATS1
DHRS4L2
SNAI1
SNRNP200
CMTM3
FURIN
ISM1
TRMT2A
RANBP1
DIABLO
THUMPD2
DNAJB3
DUS2
DDX28
PNPT1
WASHC2C
TCTEX1D2
TNFRSF10D
NOL7
VMP1
PTRH2
E2F3
DCP1A
ABCB6
FABP1
FAM83D
SERPINA11
SH3YL1
ACP1
CCT4
EXOSC6
UQCC3
LBHD1
H4C15
H4C14
EIF2D
TMA16
APOB
MCM6
ZCCHC3
MOB4
ZNF598
WDR6
PSMD7
UCKL1
H4C5
HCRT
C19orf53
H2AX
MARCHF11
TRADD
HSF4
FBXL8
ARFGEF2
SRRT
FAM53C
CDC25C
STEAP1
SCN3B
GHSR
CSF3R
GATAD2A
H4C2
H3C2
SPG11
ZGPAT
ARFRP1
H2AC4
RAD9A
CCDC117
NEPRO
PTCD3
POLR1A
DNMT3A
CARTPT
PIGL
NCOR1
C10orf88
VRK2
NUP62
IL4I1
ATF5
TSG101
MLANA
NFE2L2
SSNA1
ANAPC2
HUS1
RABL2B
TM9SF1
GADD45B
SYNM
ITPR1
XKR9
LACTB2
H3-3B
UNK
OSGEPL1
DMAP1
MAN2C1
SPTSSA
IPMK
CISD1
CARMIL3
APOA1
GRIK2
NBPF1
SRP68
PLS1
ZNF571
ZNF540
SMC3
TMEM200A
SAMD3
MRNIP
GALR2
NDUFB3
FAM126B
NSA2
GFM2
HIBCH
DUS3L
MEIG1
DCLRE1C
RPL29
CFAP65
SLC17A9
SGF29
AKR1A1
ABCF1
CCDC126
BOLA3
HBS1L
HERPUD1
UGT2B10
UTP14C
AKAP10
KRI1
CDKN2D
CPPED1
USP42
XYLB
CACNG3
ZNF148
SHH
SCAPER
FAM133B
FDXR
TSEN15
AGGF1
SULT1A4
SULT1A3
UBL7
TOM1
BCL7B
BRMS1L
EFCAB13
SLC39A4
CPSF1
NEK2
LOC110384692
C4A
DNAH14
KNOP1
IQCK
MST1
TRIM25
NEK3
AK2
YIPF3
POLR1C
GLO1
U2SURP
HECTD1
SRSF5
DDX18
CTR9
DUS1L
LUC7L
NOL10
PSMB6
NAE1
AFF1
PGGT1B
TASOR
EIF3F
TACO1
LGALS13
DCAKD
ADCYAP1
UBOX5
FASTKD5
NMT1
OTOS
COPS9
MRM3
GLOD4
HSPA5
NME3
MRPS34
EME2
CC2D2B
CFL2
ZFR
RXFP3
DRD2
BSX
NUDT3
PAQR7
PYGB
TBX10
MITD1
FANCL
ZBED9
SRP54
DPY19L4
RPS27L
C20orf144
ACTL10
STT3B
TMEM101
CCDC43
LCMT2
ADAL
TMEM222
PVALEF
ATP2B2
AATK
AAR2
MAVS
NR1H2
TRDMT1
SETD6
SELENOW
ZNF264
ARHGAP40
HSPE1-MOB4
HSPE1
HSPD1
MEX3D
FBLL1
NPM1
SSBP1
CWC25
ZNHIT3
RCL1
TMX3
CCDC102B
CRLS1
ANKRD36C
ARL4D
PARN
BFAR
CHRDL2
RPS3
RNF227
TMEM230
GRM4
NELFA
ANAPC11
ALYREF
RPL5
ALDH7A1
SKP1
TTC5
KLHDC2
HSPA1L
HSPA1A
GTF2H2C
STK4
ARSG
GTF2H2C_2
PGAP2
SELENOP
NUBPL
C5orf51
ZSCAN30
ZKSCAN2
PDCD7
NOP58
TFB1M
ALG10
NCAPH
THOC5
NR1H3
ACP2
ADAM22
CCDC88C
CHID1
DNPH1
PDRG1
OSBPL8
UTP3
SUPT3H
AIP
NID1
EBNA1BP2
CFAP57
MRPL16
AK3
DGCR8
DDX19B
TOR1A
AARS1
B3GNT6
XRN2
PBRM1
GNL3
TTI1
RPRD1B
ZBTB8OS
RBBP4
RPS20
SLC6A12
CLCN7
GTF3C6
SUGCT
MPLKIP
CSE1L
CACYBP
PSMC4
CSNK2A1
LAMTOR5
C16orf72
RNMT
FAM210A
NFKBIZ
NHEJ1
LHX3
RPS15
ZNF878
LIG3
GNPNAT1
CABLES2
COX16
MSH5
CLIC1
ZHX2
PARL
NCL
ZNF337
NAGK
ALG1
TRMU
KCTD5
USP37
CNOT9
SMG1
DNAH7
SH2D6
RANBP2
CHCHD2
TRIP4
MCCC1
MCAT
HNRNPH1
EEF1AKMT1
ALKBH3
MRPS31
KCNC1
ID1
ZNF296
GEMIN7
ZBTB40
WDR70
EIF2AK3
CFAP20
PHYHIPL
RBM12
CPNE1
RCC1L
PAXBP1
SCG2
TMEM242
GINS2