ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478564 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◢ SRX10478563: Hep G2

◣ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

XKR7
NPAS4
IQSEC3
LIN28A
INSM2
NKX1-1
FAM24A
CELSR3
HTR5A
L1CAM
KCNH7
GLRA1
RAB37
EPHA10
CPLX2
SMIM17
DLGAP3
SCRT1
RTBDN
MTRNR2L2
MSH3
DHFR
MTRNR2L1
CHGB
BARHL1
SNAP25
SST
MTRNR2L8
RANBP3
HES3
MYT1
MAPK8IP2
LHFPL5
SLC12A5
ANK1
GDAP1L1
KCNK12
TMEM181
MMP24
FRG2C
HPCA
NPPB
SRRM3
DUX4
DNAJC6
SEZ6
NTSR2
GCFC2
SCRT2
PCNA
KDM3A
CHRM4
GRM1
SIGLEC10
LEMD3
SLC39A3
PTMA
SCGN
CHRNB2
PTPRN
OGDHL
VGF
CYB5R4
USP30
SVOP
CDIP1
RAB11FIP4
CCDC92B
KLF11
HBQ1
HBA1
SLC7A6OS
PRMT7
NRSN1
HS3ST2
STMN3
RTEL1
WDR74
ODC1
RNF130
CABP7
UNC80
JPH4
PGBD5
PDE4C
HMGA1
ZFYVE27
BICDL1
DLL3
IKZF3
ZPBP2
PTPRS
CEMIP
SCAMP5
PMS2
AIMP2
PDE1C
N6AMT1
MFF
RFC1
CDCA7
PIK3R3
VWC2L
SPHK1
SEZ6L2
ASPHD1
SLBP
PRMT8
FRG2
TRIM44
HES6
FUS
LCLAT1
THOP1
SGTA
HDAC2
PROCR
CHGA
PTP4A2
GRM2
EGR4
FBXL16
HHATL
TMEM179
DHDDS
TIGD1
EIF4E2
BCL7B
DNAJC11
TEX14
RAD51C
NEUROD1
GPR78
SLC18A3
CHAT
NR1D1
EVI5
CPNE9
NOC3L
CTNNA2
CTF1
BCL7C
GPR6
AP3B2
SIRT4
GTF3C3
RESP18
PAQR7
KATNA1
DIABLO
GJA10
SCAPER
CTDSPL
LTB4R
CIDEB
RPL31
TPH2
RAMAC
HCN2
H4C11
EFHD1
POU4F3
ZNF473
VRK3
H4C3
H1-6
TINF2
USP14
RBM28
KCNH6
H4C12
HEXD
SPOP
PET117
KAT14
RNASEH1
COPS6
ATCAY
H4C15
H4C14
SLC7A14
LGALS13
NDUFAF1
LOC112694756
PRKDC
MCM4
TMEM107
PMVK
SMARCD2
LRP6
CEP295
MYORG
C9orf24
MARCHF4
PTDSS1
MTERF3
GDI2
HRH3
SMPD3
E2F3
WDR36
PSMD3
TTI2
FGG
NEK3
SCG2
PODXL2
URGCP
UBE2D4
ARFGAP3
AATF
PLEKHM3
UGT1A1
GPRIN1
RNF227
WTAP
SOD2
PDHB
TMEM268
DHRS2
ACSL3
PRMT5
TMEM242
POLDIP3
HDAC4
AKAP10
MOGAT1
SLC45A4
KCNH4
HCRT
TM9SF1
TRPM8
TOMM34
FAAH
CRH
DDX1
RNF103-CHMP3
RMND5A
SRSF6
NMS
SCG3
RAD50
MAT2A
SPAG4
ABCA3
SUPT3H
ARHGAP1
ARSG
TTI1
RPRD1B
LTV1
EPM2A
ESYT3
VRK2
PRRT2
MAZ
UTP11
HECTD1
ZBTB4
SLC35G6
POLR2A
ANKRD36
NCAN
MRPL3
E2F1
TSEN54
CASKIN2
EIF4A3
DNER
ADCYAP1
EPHX2
H4C2
H3C2
H3C12
H2BC17
H2AC17
RSPH3
MED31
C17orf100
MTF2
TOB1
SEC14L1
CDK5R2
CCDC88C
CENPA
PTPN6
C12orf57
PCDH8
CCNL1
IL17RC
CDC16
GTF3A
NANP
PHF20
GPN1
CCDC121
RIOK2
SNRPB2
ID2
DPP10
MEX3D
RTN2
PPM1N
S100A8
HTR1A
KIAA0895L
EXOC3L1
GRIK2
AIP
SYP
SLC25A21
RGMB
SEH1L
CTXN1
CC2D1A
C19orf57
SNAPC2
LRP2BP
ANKRD37
UTS2R
FANCD2
NOP14
GRK4
RABGGTA
H4C4
ELOVL3
DTD2
SCIMP
FANCL
MDP1
CHMP4A
GGACT
E2F6
CCDC107
PGRMC2
TMEM106B
RGS20
ZNHIT3
NME6
CFDP1
NID1
DNA2
APOLD1
GRM4
UNC13A
PCSK1
BSN
MVD
THUMPD3
HLTF
LRRC59
H2AC4
NCL
SCGB1D2
RRP1B
HSF2BP
POLE4
RPLP1
HSP90AB1
ZNF337
ACSL6
CITED2
SNRPB
NSFL1C
H3C3
H2BC3
PHETA2
NAGA
TERF1
HBM
HBA2
ZNFX1
CNPY3
RPS13
ZNF131
MPPED1
OSCP1
SRSF7
ATP5F1E
NBPF1
LRIF1
ZCCHC7
ANO10
ABHD5
SNTG1
ANKRD34C
CLVS1
ANKRD36C
PRG3
SH2D3C
NDUFS7
KIFC1
SLC25A10
CFAP65
C16orf72
ZMYND10
NPRL2
CYB561D2
ABCC11
LONP2
POLR2J3
PRRC2B
CCDC83
NAGK
BRMS1L
EIF2D
PBRM1
GNL3
CERS6
ISM1
NELFA
TSPAN10
NPLOC4
ATP6V1B2
GET4
REX1BD
RAD9A
KRI1
CDKN2D
DUS1L
NME1-NME2
NME1
MNAT1
INSR
H1-2
DHRS4
MRPL44
CMTR2
NPDC1
TEFM
HHIPL1
CCDC85C
SYNJ1
THNSL1
GLUL
GPCPD1
NDUFS3
KBTBD4
TASOR
SLC44A1
MCM3
EIF2B3
SLC25A3
SLC24A1
INTS14
EIF3CL
EIF3C
C14orf93
GRIA2
AKAIN1
XKR4
CTXN2
CEACAM18
RPF1
PRDX1
EBAG9
EBNA1BP2
CFAP57
SLC3A2
NXF1
TIMM21
FBXO15
ZNF783
ANAPC11
ALYREF
HIRIP3
OPRM1
LUC7L
ST8SIA3
SPTSSA
LMCD1
RIF1
NUP62
IL4I1
ATF5
COX18
PNPO
CDK5RAP3
SLC17A9
ZKSCAN2
KCNC1
CKMT1A
GATAD2A
IPMK
CISD1
SLC6A12
KANSL3
FER1L5
ZNF579
FRA10AC1
CDK5RAP1
METTL2A
C5
TK2
CKLF-CMTM1
CKLF
CNTRL
STAT1
TMEM14B
CYP21A2
ID1
GINS2
SPRYD4
CALB1
FEM1B
MYBL2
COA7
TAS1R3
NR1H3
ACP2
FOXJ3
GOLGA8A
UCKL1
DLX2
ALG1
TUBGCP3
FTL
RTL10
GNB1L
KIAA1586
DDX5
H3-3B
STX16
ZC3H7A
ABCC6
CCDC117
P4HA1
LDHA
KIF2A
LSM12
G6PC3
MIA2
CCZ1B
ABCB6
EFCAB13
PHF1
TANK
DIDO1
CTNNB1
CALM1
SRSF2
MFSD11
PSMF1
SCFD1
MLXIP
ZNF296
GEMIN7
GID8
MAP2K2
CCDC116
MOCS3
DPM1
NOLC1
TFRC
C7orf25
GINS3
TMA16
FN3K
DUS2
DDX28
H2AX
CPPED1
FBLL1
EPOP
POLD2
ZNF629
SSTR5
DDIT4
ELAC1
RTTN
ZNF628
CENPS-CORT
CENPS
BCKDK
PITRM1
FURIN
ATIC
RPL27
VPS29
RAD9B
CD320
ZNF248
TXNDC5
DISP3
C10orf88
CHID1
DDX56
C17orf75
INTS12
GSTCD
MSH5
CLIC1
CPNE4
ZCCHC3
GLS2
SMAD2
PRLHR
SAR1B
MARCHF11
UBE2S
KCTD13
GJD2
ACY1
LTA4H
SLC35A3
TRAPPC6B
PNN
FAM133B
H2AJ
RUNDC3A
HSPA1B
FAM163B
SLC39A4
CPSF1
COQ8A
ZNF770
H4-16
EXOC2
HNRNPAB
TP53RK
SLC13A3
THUMPD2
TRIM67
VCPKMT
TUBB1
KCNIP2
HERC3
NDUFAF5
ESF1
NSUN5
TRIP4
SUPT7L
SLC4A1AP
PYURF
PIGY
UGDH
YTHDF3
RPS19
HEATR5A
MEIG1
DCLRE1C
DUSP7
ARL17B
ARL17A
ERCC6
ACAD9
ACTL6B
PPY
ZNF280D
ANKHD1-EIF4EBP3
ANKHD1
ACTA1
UBE3B
CPQ
ITPRID2
NOL10
H3C15
H3C14
H2AC19
H2AC18
EIF2S2
RBM18
MRRF
PPP1R3C
OTOA
PKM
RXRA
ELOVL1
PBX3
KRR1
DUS3L
TACO1
DCP1A
UBE2Q1
GGA2
SMC3
PSMC3IP
TIPIN
TIMM44
EIF2B5
TOMM5
NOL7
AAR2
LDAH
SNF8
SMAD5
RPIA
RETREG2
CNPPD1
BIRC6
CCL16
CLCN7
NQO2
CAMTA1
RANBP2
RPL10A
MRPL27
EME1
SNRPD1
SRP19
DHX40
CDIN1
C19orf48
JPT1
ZNF487
MBTPS2
MCAT
NPM1
FAM120B
GOT2
CYGB
SCGB1D4
OR1E1
GFI1
BBC3
OPA1
CSTF1
AURKA
MAPKAPK3
COPS7A
INA
FABP1
TBCB
POLR2I
OVOL3
NFATC3
CISH
IGFBP4
EBPL
XKR9
LACTB2
MRPL58
MGST3
SPATA25
NEURL2
CTSA
AARS2
MIS18BP1
HINFP
KIAA1191
ARL10
FERMT1
TPRA1
MCM2
PSTK
TMC7
STK25
DGAT2
PCSK9
GTF3C6
MTHFD1
TEAD3
EIF3B
RIOK1
CAGE1
HESX1
APPL1
TGOLN2
CPE
LAPTM4B
TMEM116
ERP29
LONP1
CATSPERD
IPO7
NET1
TAF3
HAUS4
TCF25
TGFBI
WDR11
NHEJ1
CETN3
EPB41L4B
STX18
IER3
PIGL
NCOR1
TBC1D19
STAU1
DDX27
HASPIN
UQCC2
PNPT1
AMZ2
FLOT1
PYCR1
GPC6
CCNC
GTF2H2
GTF2H2C_2
HNRNPH1
MOB4
GOLGA4
TOB2
POR
TJAP1
UBE2V2
KIAA1958
C9orf147
C4B_2
C4B
WASHC2C
USP42
LOC110384692
C4A
SRP54
GDAP1
PLLP
FAM227B
DTWD1
IDH3B
USP4
ZNF747
LNPK
GPX1
FAM151B
BTBD10
ARL6
CALM2
RHOB
TSN
FAM83D
RPL5
FGFBP3
YIF1A
TMEM151A
SMIM26
RPL3
HAAO
SH2D2A
PTPRK
PTPN2
NTRK1
AVPI1
ANKRD39
GTF2H2C
SRFBP1
SLC25A36
KCNB1
PTEN
KLLN
ATXN2L
EAPP
CNGA3
MRPL17
FOXRED2
FANCA
POU4F2
GUCY1A2
PUM2
MVK
AXIN2
SOGA3
SLC35F5
PSD
FBXL15
METTL2B
ZNF391
RPL21
TSEN15
AK2
SRSF1
LTBR
C16orf95
UTP4
TIAL1
FN1
EDC4
DERPC
CHTF8
PIGF
CRIPT
NUP54
PC
EZH1
NUP50
EIF4A2
SCAND1
DPY19L4
LHX3
CDKAL1
PDP2
DIP2A
MCL1
SFI1
EDEM2
ECSIT
DNAJB2
TTC21B
ARL6IP1
PSME3
PLEKHG4
TRIM27
FAM219B
AGPS
GMEB2
SELENOP
TCFL5
RUVBL1
MTIF2
PRR3
GNL1
EEFSEC
TUBA1B
SPRYD3
FOXQ1
NGDN
TMEM230
USPL1
HMGB1
PLD6
SNRNP70
AKAP11
RPE
SLC25A13
TUBB3
MC1R
TAF15
MFAP3L
DAXX
PDS5A
CBFB
MAT1A
PIMREG
ZNF195
YWHAQ
PGLS
DLK1
DBI
C2orf76
PEX3
ADAT2
H4C5
RFC5
COMMD2
TBC1D13
ASNSD1
ASDURF
ALDH7A1
TRMU
UBB
TIMM22
CHEK1
COMMD4
STXBP1
ZNF219
ACIN1
ANKAR
CDKN2AIPNL
ATP5F1B
ZC3H11A
ZBED6
TTC7A
MCFD2
PDE12
XRN2
BMS1
C2orf73
VARS2
MRPL45
SLC16A3
UTP18
MBTD1
HM13
TTPAL
AGMAT
JAGN1
ATP5MC2
PDE2A
TMEM9
KANK1
BAIAP2
MARCHF8
ZNF292
UCHL5
RO60
METTL3
EIF3A
TFAP4
PCID2
NUP93
EEF1AKMT2
CUL4A
PM20D2
MCM6
PSMD7
MPI
POLR1F
PDIA3
NEPRO
SUGCT
MPLKIP
CSE1L
YARS1
S100PBP
SLC17A6
GZF1
C16orf46
PSMD14