ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116459 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◣ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
RGPD2
RGPD1
MTRNR2L10
IDH3B
CCDC59
SUMF1
ATG14
NAGPA
MTRNR2L2
RBM19
VPS50
HEPACAM2
NGDN
MTRNR2L8
SPNS1
TMEM242
U2SURP
HAGH
FAHD1
ZNF830
CCT6B
TRMT1
PPWD1
CENPK
FAM204A
MRM3
GLOD4
UBE3B
MRPS18C
HELQ
RBM48
PEX1
GPATCH3
ISY1-RAB43
ISY1
MRPL39
CDC23
GATB
COMMD9
ERAL1
EIF2D
ZFYVE26
ZC3HC1
MRPL1
PHF5A
ACO2
SMG8
RTTN
TSR3
GNPTG
LMAN2
C8orf33
ZNF165
GTF3C5
MED6
COPS7B
MED24
TOMM22
NOC2L
POLR3F
DZANK1
NDUFAF2
ERCC8
SSNA1
ANAPC2
GET3
WASHC2A
SFSWAP
RANBP6
TCTN2
TMEM41A
MTRNR2L6
KRR1
TIMM22
PPT1
BSDC1
WDR18
TRAPPC2L
GALNS
FBXL12
XAB2
PSMB7
NDUFS3
KBTBD4
ZNRD2
PEPD
TFPT
PRPF31
TOMM6
PUS10
PEX13
TRIP4
MRPL44
INTU
POLR1F
SREK1IP1
CWC27
NCAPH2
LMF2
SUPT7L
SLC4A1AP
TMEM199
POLDIP2
C16orf91
LIN52
ALDH6A1
MRPL45
FEM1A
MTIF2
BRIX1
NUP214
NDUFS7
WASHC2C
DNTTIP2
UQCC1
VIRMA
MRPS15
MRPS14
SCML1
RNF26
COPS5
RPTOR
ALG1
SAP30BP
RECQL5
RRP15
ADPRS
PDCD6IP
TMEM208
LRRC29
TMEM126B
DLG2
PELP1
MRPL55
TIMM17A
EIF3H
URM1
CWF19L1
BBS1
YIPF2
TIMM29
IPO11
TAF3
RBM42
PFDN1
DBT
NOL8
CENPP
FASTKD2
LARS2
TMEM101
COX10
VPS11
EIF1AD
BANF1
FAM162A
CCDC58
NSFL1C
UBIAD1
NPM3
CRBN
PMPCA
ENTR1
TRIAP1
TSR1
SETD3
CCNK
MTBP
MRPL13
C17orf75
WDR74
LONP1
CATSPERD
TMEM203
NDOR1
TXN2
DNAJC30
BUD23
ZMAT2
RPUSD4
FAM118B
METTL16
BRF2
CPSF1
HBS1L
EIF3F
MRTO4
EMC1
DNAJC11
GPATCH4
BABAM1
TOP3A
SMCR8
MRPS22
CEP20
MFN2
MRPL58
PIGL
COMMD4
MKS1
HEXA
KAT8
RCE1
DDX23
SF3B2
RTN4IP1
QRSL1
NEURL2
CTSA
C5orf51
PSMC3
VCPKMT
NUP54
MRPL21
IGHMBP2
BLOC1S1
NMT1
DCAKD
SF3B3
COG4
NUP160
ATP5MF-PTCD1
ATP5MF
SLC25A26
NMNAT1
LZIC
PEX19
MYL5
ATP5ME
C12orf43
OAZ3
MRPL9
VPS33A
CSTF2
MTRNR2L1
QRICH1
MRPL2
KLC4
ZBTB45
TRMO
NOL11
UTP20
DPP9
SENP1
PFKM
USP30
TRMT61B
MRPS11
MRPL46
PISD
ZFAND2A
MNAT1
COX16
OXNAD1
DPH3
HNRNPA1L2
RBX1
TACO1
MOCS3
DPM1
SUPV3L1
RPS28
NDUFA7
MRPS31
MRPL48
DIABLO
NDUFAF1
KCTD5
TAS1R1
NOL9
UHMK1
HMGCL
THUMPD1
OS9
ZNF213
RABL3
GTF2E1
SPRYD4
MZT2A
SLC25A53
ARFGAP2
ZNF17
ERGIC2
ZSCAN22
ALKBH3
SUGCT
MPLKIP
TEFM
ATP7B
ALG11
VAC14
GRWD1
TIMM21
FBXO15
TNPO3
TJAP1
TM9SF4
RNF6
XPO4
USP54
LYRM4
FARS2
CDK5RAP1
TAF2
VPS25
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
LIN7C
PPP1R7
PASK
OSCAR
NDUFA3
ATXN2L
OPA1
COPS8
SLC35A3
ABT1
TPP1
DNAJB12
DOHH
AURKAIP1
DMAC2
HSPBP1
WDR48
SCN11A
MRPS10
PCID2
CUL4A
KDM4D
CWC15
RANBP3
STX18
USP8
POLR1H
TATDN3
NSL1
NCAPD2
MRPL51
WDR24
SMPD4
MZT2B
MED23
TBRG4
MPHOSPH10
MCEE
SEC16A
C9orf163
DUS2
DDX28
ANKRD13C
TMX2
MED19
CCAR2
EIF3E
PHB2
MTO1
HAX1
ZDHHC6
VTI1A
WDR53
FBXO45
UBN1
GLYR1
NUP155
EEF1E1
CCDC43
NOC4L
DDX51
TAF11
NDUFA10
METTL2B
PIGK
SLC35B1
ZZZ3
NDUFB5
MRPL47
TRMT44
ACOX3
ARFGEF2
STX16
SLC7A6OS
PRMT7
ZNF2
FDX2
ZNF770
KLHDC4
SYF2
CACTIN
AP5Z1
LSM5
DDT
DDTL
MFSD5
TMEM217
TBC1D22B
ARMC8
DUS4L-BCAP29
DUS4L
COG5
APTX
PPP1R15B
EMC4
TSN
ISCU
SART3
TSR2
SNRPC
RNASEK
IQCH
AAGAB
MAGOH
ZKSCAN4
EFTUD2
CCDC103
CDKAL1
TAX1BP3
EMC6
GCDH
TIMM44
TBC1D22A
DHX40
RFXANK
BORCS8
XPC
LSM3
WDR83OS
WDR83
LAMP1
TMEM126A
FANCD2
YIPF3
POLR1C
POLR2K
ZC3H18
NDUFA9
AKAP3
NDUFV1
ZMPSTE24
RPUSD2
GOLGA3
GTF3C3
TRDMT1
WDR36
LRRC8A
KYAT1
SRPRA
UMPS
RPS7
TBC1D23
ACIN1
PUM3
GOSR1
UQCRC1
ZCCHC4
EXOSC3
UBN2
NSUN4
PHAX
UBXN11
HIRIP3
MRPS7
GGA3
TRUB1
MYSM1
DDX46
TM2D1
NOP16
HIGD2A
SF3A3
ZNF561
STOML2
YBEY
MCM3AP
CXorf56
GTF2H3
EIF2B1
ZNF383
SDHC
SSBP1
VAMP3
NCSTN
COPA
UBL5
L3MBTL2
NUF2
NDUFAB1
ANKFY1
PTCD2
MRPS27
SDE2
ZDHHC16
EXOSC1
MTMR4
ABRAXAS2
ZBTB8OS
RBBP4
IPPK
MCOLN1
TUFM
SH2B1
MED4
MIA3
MRPL4
WDR11
CCDC97
B4GALT7
TOP3B
MRPL20
SMU1
ZNF497
ASH2L
GPN1
CCDC121
FRA10AC1
ZNF461
TBC1D17
AKT1S1
ELP5
CTDNEP1
WASHC5
NSMCE2
PEX3
ADAT2
EXOSC9
TEPSIN
NDUFAF8
PEX14
FAM149B1
ECD
GTPBP10
NUP107
ZNF408
ARHGAP1
TBL3
VPS52
RPS18
ZWINT
PNPT1
MAGOHB
EIF4G2
ATAD3B
COMMD2
OSBPL9
TMEM128
METTL1
EEF1AKMT3
ANAPC11
ALYREF
TERF2IP
KARS1
SPC25
MRPL53
MRPS34
EME2
ZNF614
RTEL1
MRPS18A
PTCD3
POLR1A
FAM32A
ITGB3BP
EFCAB7
PRPF38A
ORC1
SH3YL1
ACP1
MRPL35
ZNF721
PIGG
AP1G1
CWC25
NXT2
MED9
DNAJA3
MAP3K7
TBC1D19
ITGB1BP1
CPSF3
SELENOH
AP3S1
SPTLC1
ZSCAN30
NOB1
RUVBL1
EEFSEC
PIGS
CMTR1
ATP6V1C1
AP3S2
VPS41
MTRNR2L3
SNRPD3
GUCD1
NR1H3
ACP2
TTC31
CCDC142
ZCCHC10
TMEM230
GBA
MRPS35
NUFIP1
GPALPP1
CHMP4A
SLIRP
ALKBH1
RNF166
CTU2
SSU72
SEC13
OTUB1
PSMB2
SEC11A
MTOR
GRPEL2
SMG7
MRPS23
SDHAF2
CPSF7
SRRD
HPS4
DCP1A
RUVBL2
GYS1
NFKBIL1
ATP6V1G2
REXO4
NDUFC2-KCTD14
NDUFC2
GTF2H4
UQCRB
SPDL1
MTX1
RMDN3
THBS4
MTX3
DDX49
COPE
AQR
WDR4
C12orf73
ZNF205
ANAPC5
NSA2
GFM2
MRPS17
ATF6B
PGGT1B
MAPKAPK5
ATRIP
FAU
FAM104B
ZNF875
MED21
CEP162
ZKSCAN8
IMMP1L
ELP4
MRPL3
MRPS18B
CSTF2T
STK36
RNF25
NHP2
NME1-NME2
NME1
TBC1D15
NOLC1
MED18
SF3B5
PAF1
ALG10
ZBTB11
BHLHB9
THOC1
MRPL52
ZSCAN9
ZNF79
MTRF1
AASDH
ANAPC1
THAP10
LRRC49
ZNF195
MED27
HIF1AN
MYNN
NDUFA5
RAB3GAP1
AHCY
PURB
CHM
PSMC4
TBCK
AIMP1
UBE2L6
MFSD1
PWP1
KANSL2
ATXN7L1
NOL10
DDX19A
KLHL7
GCN1
JRK
NUDT5
CDC123
GADD45GIP1
WBP1
ANTKMT
ZNF426
RBM23
DHDDS
TFIP11
MRPL27
EME1
TMEM183A
RPAIN
NUP88
TTC26
SDR39U1
DNAJC25-GNG10
DNAJC25
YJU2
NDUFAF5
ESF1
RPP30
TMEM237
ZNF622
GTF2H2C_2
GTF2H2
SCAF11
MED1
GPATCH1
BNIP1
FAF2
PPIL1
OTUD6B
PSME3
FCF1
AREL1
ZNF594
COQ3
POLR2J2
GID4
ATPAF2
EIF4B
FUZ
PCNP
MRPL37
CYB5RL
GRN
SRSF11
LRRC40
MALSU1
ZNF581
COPS4
RNASEH1
ZNF507
ATP6V1G1
COPZ1
POLR3B
VPS35L
HTRA2
SNX1
RPAP1
PPAN-P2RY11
PPAN
NELFA
WDR20
HSP90AA1
TIMM50
PRR3
GNL1
SF3B6
FAM228B
DVL2
NOXA1
PFAS
OSGEPL1
FAM98B
PSMB6
BMS1
RNF181
RBBP5
MAZ
BRCA1
ZNF501
BORCS7
TBC1D30
GNS
RBM28
NUP188
DOLK
CLPTM1L
CCDC57
COQ5
SLC33A1
GATAD1
POLR2J3
SERP1
EIF2A
ALG10B
POMZP3
MARCHF8
RAD54L2
FAM227B
DTWD1
SDHB
NCBP2AS2
NCBP2
NDUFB3
FAM126B
TSFM
ZNF292
SAP18
SPC24
NOL12
TBCC
BICRAL
HMBOX1
TOR1AIP1
INTS3
UTP15
ANKRA2
DNAJC13
C1orf109
NKAP
CDCA8
ATG5
ATG16L1
ILF3
WDR61
STARD3
MED28
EXOSC2
PRKRIP1
INTS12
GSTCD
TRAPPC4
RPS25
UBA5
ACAD11
MAF1
RPL37
BRMS1
DOLPP1
VTA1
NMBR
SENP5
NDUFS4
YARS2
PINX1
SBDS
POLR2J
NARS1
MUL1
ARMC1
METTL2A
HSD17B10
METTL14
MRPL16
RPL23A
ZSWIM1
C1D
CLPTM1
USP20
C9orf78
PPIG
PTPA
CRAT
NAT10
UBE2L3
ZBED5
LEMD3
TIMM10B
ARFIP2
DCAF10
RSL24D1
LMTK2
AARSD1
GID8
DIDO1
CHCHD1
PPIL3
NIF3L1
PLAA
IFT74
MITD1
DCTN6
PRKRA
PJVK
VPS37A
CNOT7
TRIM23
TRAPPC13
SHLD3
MRPL22
TFB2M
CNST
ZCRB1
PPHLN1
RBM15
RPL9
LIAS
NDUFB6
NDUFV3
ZFPL1
CDCA5
SF3B4
CCDC77
KDM5A
TUT1
SAR1B
TVP23B
SLC35F5
AGO3
IPO4
EXOSC10
GOSR2
GALK2
COPS2
COX7A2L
COPS9
SEC24C
UROS
BCCIP
IKZF2
DDX47
HNRNPH2
SNRPG
DMAP1
RFC4
MICU2
CLN3
CHIC1
STYXL1
IARS1
RPL22L1
KLHL26
TBCCD1
DNAJB11
DCTN4
KLHL20
SDHD
PSMC2
TMA16
ZNF181
BBS10
SPOUT1
USE1
DUS1L
CPPED1
BLOC1S6
CHMP2A
FBXW9
FAM207A
SIRT3
PSMD13
WDR25
WARS1
HEMK1
QTRT1
KIF15
KIAA1143
DNAJC2
TYW1
TCERG1
MRPS28
XPNPEP3
ST13
ZNF778
MFSD8
ABHD18
TOMM40L
ZWILCH
RPL4
SDHAF3
DPP8
TRAPPC8
PFDN4
MAN2C1
RBPJ
LMAN2L
ZNF304
MESD
PRPF6
FXR1
ZGRF1
LARP7
TRUB2
COQ4
RECQL4
LRRC14
LTN1
GMPPB
EIF3K
PRKAR1B