ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186642 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◣ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
RGPD2
RGPD1
MTRNR2L10
IDH3B
MTRNR2L2
CCDC59
NAGPA
RBM19
MTRNR2L8
SUMF1
NGDN
TRMT1
ATG14
MRM3
GLOD4
ZNF830
CCT6B
HAGH
FAHD1
TMEM242
U2SURP
FAM204A
ISY1-RAB43
ISY1
GATB
CDC23
MTRNR2L6
VPS50
HEPACAM2
MRPS18C
HELQ
GPATCH3
MRPL39
TSR3
GNPTG
PPWD1
CENPK
ZFYVE26
UBE3B
COPS7B
SMG8
RBM48
PEX1
ZNF165
GTF3C5
EIF2D
SPNS1
MRPL1
MTRNR2L1
SFSWAP
C8orf33
RTTN
LMAN2
COMMD9
KRR1
WASHC2A
RANBP6
GET3
ZC3HC1
MED24
NDUFAF2
ERCC8
ERAL1
PHF5A
ACO2
SSNA1
ANAPC2
MED6
TMEM41A
TMEM199
POLDIP2
WDR18
POLR3F
DZANK1
MRPL44
NOC2L
TRAPPC2L
GALNS
SREK1IP1
CWC27
NCAPH2
LMF2
BRIX1
PSMB7
SUPT7L
SLC4A1AP
INTU
TCTN2
TRIP4
PUS10
PEX13
TOMM22
NDUFS3
KBTBD4
TFPT
PRPF31
XAB2
DNTTIP2
BSDC1
EIF3H
PPT1
ALG1
TIMM22
C16orf91
POLR1F
VIRMA
NDUFS7
TOMM6
MRPS15
ZNRD2
MTIF2
PEPD
RNF26
FEM1A
SAP30BP
RECQL5
CWF19L1
COPS5
URM1
PDCD6IP
LARS2
FBXL12
RBM42
MRPS14
FAM162A
CCDC58
UQCC1
NUP214
BABAM1
MRPL45
EIF1AD
BANF1
RRP15
NOL8
CENPP
MRPL55
TMEM208
LRRC29
RPTOR
SETD3
CCNK
FASTKD2
PEX19
EIF3F
TMEM101
CRBN
ADPRS
TAF3
BBS1
TSR1
ZMAT2
HBS1L
DBT
LIN52
ALDH6A1
TMEM126B
DLG2
TMEM203
NDOR1
PFDN1
MTBP
MRPL13
NPM3
PMPCA
ENTR1
UBIAD1
WASHC2C
NSFL1C
HEXA
NUP160
DNAJC30
BUD23
NMNAT1
LZIC
TIMM17A
TRIAP1
MKS1
VPS11
TXN2
BRF2
GPATCH4
SF3B2
MRPS11
MRPL46
RCE1
SF3B3
COG4
CPSF1
MYL5
ATP5ME
RTN4IP1
QRSL1
TRMO
MRPS22
DDX23
YIPF2
TIMM29
SPRYD4
MRPL21
IGHMBP2
SENP1
PFKM
COX10
HNRNPA1L2
NOL11
IPO11
MOCS3
DPM1
CEP20
COX16
C5orf51
PSMC3
ATP5MF-PTCD1
ATP5MF
NMT1
DCAKD
MRTO4
EMC1
ZNF213
METTL16
COMMD4
MRPL2
KLC4
QRICH1
MRPS31
TAS1R1
NOL9
PISD
C12orf43
KAT8
PIGL
UTP20
TRMT61B
NUP54
KCTD5
TACO1
C17orf75
NEURL2
CTSA
RBX1
WDR74
LONP1
CATSPERD
SUGCT
MPLKIP
PELP1
MFN2
TOP3A
SMCR8
ZFAND2A
RABL3
GTF2E1
VPS33A
TEFM
NCAPD2
MRPL51
ZSCAN22
ARFGAP2
BLOC1S1
ZNF17
OSCAR
NDUFA3
RPUSD4
FAM118B
NDUFAF1
UHMK1
OXNAD1
DPH3
MRPL58
HSPBP1
THUMPD1
VCPKMT
SLC25A53
ZBTB45
OS9
ATP7B
ALG11
GRWD1
OPA1
OAZ3
MRPL9
XPO4
CDK5RAP1
TAF2
DNAJC11
MZT2A
TATDN3
NSL1
TPP1
DMAC2
STX18
MRPL48
VPS25
LIN7C
POLR1H
MNAT1
TNPO3
VAC14
LAMP1
ABT1
ANKRD13C
PPP1R7
PASK
KDM4D
CWC15
WDR24
DNAJB12
RNF6
ZZZ3
ERGIC2
TJAP1
RNASEK
TMX2
MED19
WDR48
SCN11A
USP54
EIF3E
ALKBH3
COPS8
MPHOSPH10
MCEE
TSN
AURKAIP1
SLC7A6OS
PRMT7
TIMM21
FBXO15
POLR2K
SYF2
MED23
SLC35A3
HMGCL
DUS2
DDX28
DIABLO
MRPS10
TM9SF4
USP30
NOC4L
DDX51
ZDHHC6
VTI1A
TRMT44
ACOX3
STX16
CSTF2
SEC16A
C9orf163
ZMPSTE24
TBRG4
ZNF770
SUPV3L1
PHB2
WDR53
FBXO45
ZNF2
DOHH
XPC
LSM3
RPS28
NDUFA7
TAF11
ARMC8
GCDH
HAX1
DDX46
ZKSCAN4
NDUFB5
MRPL47
WDR83OS
WDR83
FDX2
USP8
SLC35B1
SLC25A26
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SMPD4
MZT2B
ZC3H18
NDUFV1
EFTUD2
CCDC103
NDUFA10
WDR36
RFXANK
BORCS8
ISCU
SART3
MTO1
EXOSC3
EEF1E1
SNRPC
KLHDC4
SRPRA
APTX
CCDC43
LSM5
TUFM
SH2B1
CCAR2
ZCCHC4
FANCD2
YBEY
MCM3AP
CDKAL1
RPUSD2
NUF2
LRRC8A
KYAT1
TRUB1
STOML2
TAX1BP3
EMC6
METTL2A
PUM3
NUP155
GTF3C3
MTRNR2L3
RANBP3
NDUFA9
AKAP3
UQCRC1
GOLGA3
UBL5
MAP3K7
MTMR4
MCOLN1
MRPS17
TBC1D22A
ZBTB8OS
RBBP4
ZNF205
ZSCAN30
GTF2H3
EIF2B1
RPS7
TBC1D17
AKT1S1
DPP9
ZDHHC16
EXOSC1
PEX3
ADAT2
ZKSCAN8
CCDC97
UBXN11
C12orf73
PIGK
NDUFAB1
UBN1
GLYR1
AP3S2
NFKBIL1
ATP6V1G2
EMC4
SLIRP
ALKBH1
SF3A3
ARFGEF2
ZNF461
MED4
PHAX
MRPL35
ACIN1
SELENOH
COMMD2
WDR11
GBA
TSR2
AP5Z1
SDHC
TERF2IP
KARS1
MED27
NCSTN
COPA
NOP16
HIGD2A
PWP1
MAPKAPK5
L3MBTL2
FAM32A
CXorf56
ZNF383
ZNF408
ARHGAP1
MED9
ZBTB11
NSUN4
IQCH
AAGAB
MRPS7
GGA3
SH3YL1
ACP1
TRDMT1
PTCD2
MRPS27
AP1G1
AP3S1
RTEL1
NXT2
MTOR
MTX1
POLR2J2
CWC25
GCN1
TMEM126A
TMEM230
GOSR1
ASH2L
SMG7
TOP3B
MRPL53
UMPS
ZNF561
SSBP1
PCID2
CUL4A
HIRIP3
ELP5
CTDNEP1
SPTLC1
TTC31
CCDC142
GPATCH1
YIPF3
POLR1C
UQCRB
ATAD3B
PTCD3
POLR1A
SPC25
MRPL20
NUP107
TEPSIN
NDUFAF8
MRPL4
PSMB2
MED18
SEC13
TMEM128
PRPF38A
ORC1
WDR4
FUZ
SDE2
METTL1
EEF1AKMT3
DCP1A
NSA2
GFM2
DUS4L-BCAP29
DUS4L
COG5
OSBPL9
VPS52
RPS18
MRPS18A
REXO4
FAM149B1
ECD
ITGB3BP
EFCAB7
SMU1
IMMP1L
ELP4
MRPL3
ANAPC5
SF3B6
FAM228B
TBC1D23
GTF2H4
TMEM217
TBC1D22B
MFSD5
CEP162
SLC33A1
TBC1D19
MRPS34
EME2
ALG10
SCAF11
LYRM4
FARS2
ATP6V1C1
TMEM183A
MAGOHB
FAM104B
ZNF79
SEC11A
PSME3
ITGB1BP1
CPSF3
GRPEL2
WASHC5
NSMCE2
ABRAXAS2
DHX40
SNRPD3
GUCD1
POMZP3
TIMM44
CSTF2T
MRPS35
PEX14
MIA3
FRA10AC1
ANKFY1
EXOSC9
NOB1
ANAPC1
GTPBP10
ZNF195
GPN1
CCDC121
PSMC4
ATXN7L1
DNAJA3
SRRD
HPS4
FAU
PCNP
NUFIP1
GPALPP1
RNF166
CTU2
MRPS23
SF3B5
FAF2
RUVBL1
EEFSEC
DVL2
ZNF497
CHMP4A
ANAPC11
ALYREF
TM2D1
SPDL1
CMTR1
AQR
NDUFA5
ZCCHC10
VAMP3
NOL10
NR1H3
ACP2
METTL14
PNPT1
MFSD1
SSU72
ZNF721
PIGG
HMBOX1
RPAIN
NUP88
NELFA
TTC26
MAGOH
FCF1
AREL1
DDX19A
SAP18
RAB3GAP1
MYSM1
SDHAF2
CPSF7
CHM
TBCC
BICRAL
RAD54L2
MTRF1
NOLC1
IPPK
BHLHB9
CACTIN
HIF1AN
UBE2L3
DHDDS
NOL12
PRR3
GNL1
ZNF581
WBP1
EIF4B
ZNF614
ATP6V1G1
NDUFC2-KCTD14
NDUFC2
VPS41
RPL9
LIAS
SDR39U1
MYNN
ZWINT
PPIL1
OTUD6B
DNAJC25-GNG10
DNAJC25
ZNF501
MRPL37
CYB5RL
OTUB1
DDT
GID4
ATPAF2
DDTL
PPIL3
NIF3L1
NDUFAF5
ESF1
NUDT5
CDC123
RBBP5
MED28
DNAJC13
ATF6B
OSGEPL1
STK36
RNF25
MAZ
METTL2B
NME1-NME2
NME1
TBL3
NDUFS4
THAP10
LRRC49
KLHL7
VPS35L
B4GALT7
RBM28
TMEM237
EIF4G2
NFX1
TOR1AIP1
RBM23
RMDN3
PRKRIP1
TFIP11
MRPS18B
ZNF292
ILF3
NDUFB3
FAM126B
THOC1
BORCS7
DDX49
COPE
ZNF594
RSL24D1
MED21
RNASEH1
YJU2
DOLPP1
JRK
CLPTM1
ARMC1
RPP30
GPAM
TBC1D30
GNS
TFB2M
CNST
MITD1
NOXA1
UBE2L6
TMA16
SDHB
TSFM
UTP15
ANKRA2
PAF1
TBC1D15
SEC24C
CCDC57
FAM227B
DTWD1
TBCK
AIMP1
COQ3
NKAP
THBS4
MTX3
ATRIP
DDX47
ZNF426
GRN
FAM207A
COPS4
MAN2C1
POLR3B
PPAN-P2RY11
PPAN
SPC24
ZSCAN9
LEMD3
AASDH
TIMM50
GOSR2
ALG10B
BMS1
UBN2
NCBP2AS2
NCBP2
CENPW
RBPJ
NDUFB6
SERP1
EIF2A
VPS37A
CNOT7
MRPL27
EME1
ZNF3
TUT1
HTRA2
PSMB6
NAT10
SIRT3
PSMD13
WDR25
WARS1
MAF1
TRAPPC4
RPS25
NUP133
TBCCD1
DNAJB11
ZNF507
TCERG1
UBA5
ACAD11
RUVBL2
GYS1
DNAJC2
RPL23A
GATAD1
PLAA
IFT74
COQ5
CHCHD1
NARS1
KIF22
RPAP1
DPP8
HSD17B10
DCTN6
ANAPC10
ABCE1
ZNF875
POLR2J3
MESD
BNIP1
TRIM23
TRAPPC13
SHLD3
LTN1
DMAP1
IKZF2
PFDN4
RNF181
CCDC137
FBXW9
SEC22B
WDR20
HSP90AA1
SDHD
INTS12
GSTCD
ANTKMT
BLOC1S6
BRCA1
RPL37
BRMS1
TRAPPC8
YARS2
MALSU1
MFSD8
ABHD18
ZNF579
ZNF304
ZSWIM1
ZNF181
METTL17
GID8
DIDO1
PINX1
ZBED5
VTA1
NMBR
PPIG
PRPF6
STK16
GLB1L
EXOSC5
BCKDHA
USE1
MRPL22
MICU2
IVD
TDG
C1D
ATP6V0D1
IARS1
MTMR9
COPZ1
MRPS28
SAR1B
QTRT1
EIF3K
CLN3
SBDS
TAF9
RAD17
AK6
TYW1
NHP2
ST7L
CAPZA1
KANSL2
CHMP2A
POLR2J
RBM8A
DPH1
PEF1
GTPBP3
SLX4IP
ABCB8
SRSF11
LRRC40
DCTN4
CCDC77
KDM5A
COX7A2L
RPL14
FXR1
SLC24A1
INTS14
STARD3
HNRNPH2
KLHL12
HEMK1
CHIC1
CFAP298-TCP10L
CFAP298
SPTY2D1
PROSER1
NHLRC3
RPS6KB2
PRMT5
NRAS
MUL1
WDR61
FASTK
POLL
DPCD
CGGBP1
C3orf38
KLHL26
PSMD4
TXNL4B
DHX38
GMPPB
MTF2
ATG5
PDCD7
MED1
MRPS30
ZGRF1
LARP7
BET1
LAMTOR3
TMEM222
MARCHF8
PRKRA
PJVK
DDX41
FAM98B
CCDC86
COPS9
PURB
TRIM52
ZCCHC9
PLEKHM3
CDK11A
PMPCB
SNRPG
DCAF10
SDHAF3
C2orf49
KLHL20
PFDN5
AAR2
PSMC6
NUP42