ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652928 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◢ CPSF6: Average

◢ SRX13652927: HeLa

◣ SRX13652928: HeLa

◢ SRX13652929: HeLa

◢ SRX13652930: HeLa

◢ SRX8945050: U2OS

◢ SRX8945056: U2OS

◢ CPSF6: STRING

SLC39A13
PAIP1
POLR2J3
AMACR
PPEF1
SECISBP2
ZER1
MARCHF6
DPH7
ZNF839
BRIX1
ATXN7L2
ASB6
FBXW2
TBC1D13
PRSS27
LIFR
NOTCH2
THEM4
ARAF
CELF1
NCOA5
NDST2
DNAJC9
PDCD6
NTMT1
NOTCH2NLB
DGKZ
COA6
IBA57
SDE2
MTMR12
NIFK
GTF2IRD2B
RRNAD1
ISG20L2
MTCH2
ZNF341
AURKAIP1
QSOX2
WDR70
EGLN1
ARHGEF5
TMEM267
PRKAA1
POLG
SLC36A4
SLC27A4
SELENOS
TRIP13
BRD9
FBXO4
C5orf51
TEAD1
PDXDC1
SYP
GCLM
B3GAT3
ARHGEF11
CPLANE1
SNAPIN
RABGAP1
OTULIN
NR1H3
ACP2
LRRC37A3
C1orf115
SYNRG
ZBTB26
PCIF1
KIF27
TRPC4AP
POLE4
PPP6R3
CERS5
CNTRL
C5
POLR3E
GCN1
CCDC34
MAPK8IP3
CENPBD1
SCAI
TVP23B
CTR9
RICTOR
MANBAL
NADK2
PHF20
SSNA1
ANAPC2
TARBP1
C6orf226
NCOA4
ISCA1
PPIB
RAPGEF1
CDC73
ETS1
DNAJC21
PHKA2
OSMR
MRPS5
VDAC2
CCT5
ATPSCKMT
TMEM222
TMEM185B
SNAPC5
TAF1D
C11orf54
DYNLRB1
XRN1
DISP3
SMCO4
LDLRAD3
NOXA1
DTWD2
TTLL11
USP2
DAP
S100A13
CHTOP
MAPKAP1
CBL
TIMELESS
NARF
PCBP2
MADD
PDZD2
MRPL38
SCAND1
IPP
GFM1
SMG5
SUB1
SRSF6
HMCES
TM2D3
TUT7
MXI1
CSRNP2
NAT10
FAM149B1
ECD
HNRNPH1
DPY19L4
SEMA3C
CHAMP1
COQ7
JRK
LIN7C
ECI1
RNF7
USP21
DIP2B
TAF1B
UBAC1
DEDD
DESI2
CHMP7
CREM
TSKU
PSMD4
LUC7L
NDUFS3
KBTBD4
FPGS
PREX1
NELFB
SETX
FBXO31
ANKH
RNF220
RPL37
MMP24OS
MMP24-AS1-EDEM2
TARS3
ATP5F1E
STOM
SH2D3C
PTGER4
DNAJB12
RWDD3
CCDC88A
GXYLT1
USP20
C9orf78
ADK
ATG16L2
TAF4
TTC9C
HNRNPUL2
CENPH
UNC50
COA5
PCCB
POFUT1
PLAGL2
NGRN
CLCC1
ZNF131
PRDX4
GSTA4
RPAP3
ASH1L
WDR25
WARS1
DHX36
CCDC138
DNAJC11
NBN
NOTCH2NLA
DIDO1
CNBP
TMEM141
TTC33
ZBTB34
SURF6
ARHGEF35
ZYG11B
METTL26
LPCAT1
AARS2
GUK1
RPS3
TRIM44
SKP2
LMBRD2
LOC100287896
LIPT2
MTRR
FASTKD3
FAM162A
CCDC58
ZC3H7A
SSU72
ZFX
ANKRD36
SRD5A1
ANKRD36C
FAM156B
FAM156A
STRBP
GALNT18
OTUD7B
RHOT2
PRDM11
PDCL3
MAN2C1
PUS7
PANK3
DAB2
H3-3B
SPTAN1
GEMIN8
RNF19A
POLR2D
KIF21A
DGAT2
CIZ1
DNM1
SDHA
CCDC127
NQO2
CREBZF
TP53BP2
ABL1
MCU
SLC30A5
BASP1
FAM102B
PPIA
BCAR3
STK17A
ZNF622
SEC24A
USE1
SCYL1
ZNFX1
STXBP3
TMEM68
TGS1
JRKL
CCDC82
SYS1
CAPRIN2
MRPL48
CA5B
CXorf58
ICE1
EDC4
ZFAND4
RC3H2
CLTC
RBM6
RELA
C1orf53
UBQLN2
ZNF239
LIMS1
DR1
GTF2A2
CCDC97
FXN
WDR13
PRC1
ZNF202
MTMR9
ARFGEF2
CZIB
POR
TKFC
DDB1
ZNF195
REXO4
CLASRP
OVCA2
GOLPH3
ATF7-NPFF
ATF7
DPP9
FAM76B
CEP57
SVBP
ERMAP
ATP6V0C
NCBP3
FAM3C
THOC3
MRPS14
SNX19
H3C13
H2BC18
MOSPD2
FANCB
RAB11A
THAP12
GVQW3
ITGB5
ARL6IP1
BCAP29
BAG2
ZMPSTE24
PSRC1
HMBS
FRAT2
EIF2D
NIT2
LRRC58
RCE1
HMGCS1
SPIN1
TMEM87B
GOLGA1
DYNC1LI2
SP1
GET4
FCHSD2
PIP5K1B
USP15
ERCC6
MICU2
TMC7
SUMF1
PSMD3
IARS2
PDHX
APIP
NRAS
ATRIP
H4C12
TIPRL
CBWD2
C8orf76
CRBN
SEC11A
ZNF212
TPRN
ANKRD36B
RXYLT1
CNNM4
AMOTL1
UGCG
UBIAD1
CPPED1
GHITM
DYNC2I2
EED
B4GALT7
SFT2D3
IQGAP1
C6orf89
TMCO3
DCUN1D2
NBPF1
SPOUT1
NUP133
SF3A1
CCDC157
TTPAL
BICD2
PXYLP1
YY1AP1
DAP3
TMEM9B
HERC4
PSMA5
ATG101
ARHGAP29
ZNF652
SLC35C2
TSC1
GFI1B
MED10
EXOC3
ASH2L
UQCC2
TENT4A
SMARCB1
LANCL2
CDK5RAP2
AVPI1
HNRNPF
FUT11
SLC35F5
CEP126
POLA1
YWHAB
TMEM41A
TTC23
LRRC28
GDF5
CEP250
ERCC6L2
CYBC1
TP53I3
TFAM
TOR1B
SRSF10
PPIL1
TSN
DLGAP4
NAXE
MAP2K2
TMEM199
POLDIP2
ST3GAL3
COG2
GINS4
RAP1A
TNS2
SENP1
PFKM
IPO13
SNRNP200
SLC35F3
TMEM106B
EBAG9
ARMH3
MYO9B
HAUS8
ROPN1L
KATNBL1
DPP8
PPP1R3F
SEC61A1
MRPL3
B3GALT4
GAPVD1
NLE1
ELOB
AGO3
AVEN
MARK1
FAM133B
KDM1A
FAM172A
NLRX1
ENDOD1
SLC35E2B
ITGB1BP1
CPSF3
NOS1AP
SEC13
RPL35
ARPC5L
CIPC
ZNF774
SRSF4
RASSF4
RABGAP1L
SAMD8
ZNF181
SERGEF
RTF2
RPL26
CCT2
KLHL12
TBRG1
FAM207A
CUL2
TRAM2
GOSR2
PARVA
AP3S2
ZNF487
ANGEL1
NDUFAB1
COX5A
LRRFIP2
PPP6C
RPS29
NUF2
ARFGAP2
DDB2
ADPRHL1
LIX1L
PCTP
SNX15
TRAP1
MYLK
FBXO22
TRAF6
RAG1
ZNF408
ARHGAP1
TAF15
AHCYL1
APPL2
PGBD1
ACER3
KRCC1
DCXR
CEP295
AFF4
DYNLT3
SELENOT
NFYC
LPCAT3
ADNP
PRRC2A
SUMF2
FLOT1
CARMIL1
MKRN2
TOR1A
SURF4
INKA2
DDX20
STARD9
FNBP4
STX16
PSMD9
HPD
SUMO2
ISG20
RNF13
NCOA3
PRPF19
ANKRD10
TTC4
ATR
SDHAF2
CPSF7
CSE1L
CASK
CDC16
HACD2
CIAO3
FAM227B
DTWD1
NUBP1
MTG1
CLYBL
PIGV
TPR
RDX
ODR4
TACO1
EIF2S2
CNOT6
TOR2A
RSAD1
EIF2S3
GRSF1
EEPD1
PTDSS1
MTERF3
SERP1
EIF2A
POLD2
MPP5
CAPN2
ASPSCR1
GCFC2
NDUFAF6
EPHX1
ASNS
EFCAB13
LARP1
TM9SF3
ERI1
AKIRIN1
SDC4
BTBD1
ACBD6
USP32
RPGR
RBKS
BABAM2
TRIM37
MLLT11
CDC42SE1
ABCA3
EXOSC6
PPARD
DTX2
SGK3
POMK
ARRDC3
COQ9
CIAPIN1
LPGAT1
ZNF33A
MTCH1
DENND1A
NOC3L
NUDT4
PARK7
ZNF76
ZNF488
RALB
AGK
PPP1CA
ZNF740
CSAD
SRP9
SAR1A
XPOT
H2AZ2
SLC2A8
MRPL40
HIRA
NCAPH
CLIC4
MAPRE1
SS18L1
PSMA7
SRGAP1
VDR
RAC1
WDR53
FBXO45
PPP4R3A
IPO9
ARNT
H2BC21
H2AC20
ARL8B
MRPS16
H2AC21
TAF6L
RAD54L2
TDRD7
PRCC
ZFAND1
B3GALNT2
PYROXD1
ALDH1A3
ZNF485
DYRK3
HENMT1
MED13L
VARS1
PSEN2
GMEB2
ANKRD33B
LAMTOR1
VEZF1
DRAP1
C11orf68
MYO10
TMEM251
MOAP1
ARHGEF7
PMEL
CDK2
EFCAB2
SRRM2
MET
STARD7
ZYG11A
TSNAX
SRPRA
TXNDC11
UBE2V2
SPATA33
TMEM47
PRUNE1
MINDY1
FNTA
CDC42BPA
FAM160A2
RUVBL1
EEFSEC
GTF2H2C_2
GTF2H2C
RNASEH2C
OGDH
ZNF410
CAMK2G
PIGO
CLPB
GNPTAB
FKBP9
DDX49
COPE
FUBP3
ADI1
TNPO1
RUFY1
DDI2
YTHDF1
SPECC1L
LRP12
BMS1
PTPN1
CMBL
RAB7A
HS1BP3
KIF1C
INCA1
ZNF251
DIAPH1
KAT8
COA8
BAG5
PPFIA4
PDAP1
BUD31
UBQLN1
SLC35A3
SPPL2A
TERF2
RPP21
NUCKS1
SLC38A1
SIRT1
FRA10AC1
C9orf16
NME2
ALAD
TRAPPC3
MAP7D1
ADSS2
CCDC91
INPP5E
CCDC7
RALGPS1
ZNF674
PAXX
SAYSD1
VPS4A
KCTD5
SMPD1
CRLF3
ENSA
PRMT2
MRTO4
EMC1
HPS5
GTF2H1
NPHP1
HERPUD2
H2BC11
H2AC11
ZNF124
COA7
VPS37C
PIP4K2B
EIF3M
MRPL27
EME1
ZKSCAN2
TMEM65
ANKRD40
IMMP2L
GATAD2A
RNF168
CAPZA2
RABL2A
SNAP47
JMJD4
ZFP1
RNF141
CFAP221
FOS
MAT2B
OXCT1
CDKN2AIPNL
NAA35
PYCR2
RAI14
C1QBP
SNX10
OSER1
NOMO2
RNPS1
NOMO3
SMARCD1
TPRA1
MCM2
FEZ2
MECR
ELP5
CTDNEP1
FSIP1
CEP135
P4HA3
NMNAT1
LZIC
RELT
UPF1
PIK3CB
ADCK1
ACTR10
TIGD6
HMGXB3
GMFB
CEP164
PTPRN2
FRMD3
SNX3
SF3B2
MTMR2
ZFP62
C7orf26
LAMC3
SH3GLB2
COQ2
ARMC5
PRPF40B
KANSL1
PLD3
C19orf47
TMEM106C
SPA17
SIAE
CCDC6
PMVK
TIRAP
NIPBL
ZNF143
ADPRS
TRIM33
SMC1A
RIBC1
URGCP
UBE2D4
DEK
TSPAN10
NPLOC4
LEMD2
POGK
CDIP1
TLCD5
SRSF11
CTNNAL1
SERF1B
SERF1A
ALG6
TP53RK
P4HA1
UBE2B
CDKL3
C5orf34
MTHFS
SDK1
ZNF3
ERGIC3
QSER1
RALGDS
UGGT1
UAP1
PRDX3
CCDC14
RAPGEF3
RNF130
EXO1
RAD51D
MIGA2
SPATS2
DAG1
LSM8
CEP63
ANAPC13
NCOA6
POLR3D
SMG1
BCL7B
FAHD2A
ZNF697
LPCAT4
COX18
NUDCD1
CHD1L
PRKAB2
TEX261
PTAR1
MDM4
OTUD3
GLE1
CHRNA5
CREG1
SART1
SMN2
SMN1
ZXDC
OPA1
CAPZB
CD82
EIF4H
STN1
YAP1
ACACA
SRCAP
LOC730183
SNAI1
LZTR1
SFT2D2
SLC25A40
DBF4
RABEPK
ATOH7
TMEM216
PARP1
FAM118A
ASAP1
AMDHD2
MRPS7
GGA3
ODF2
SLC44A1
VPS26A
MSTO1
WDR41
EDF1
LYRM9
SLC9A8
SIAH2
GPR89B
PTGES2
C7orf25
JAGN1
DNAJC22
CTNNBIP1
STK4
ZNF25
ANXA7
ALDH9A1
UBP1
ERN1
SLC6A9
GMPS
PUF60
NDUFS6
STK3
COQ10A
TCAIM
METTL1
EEF1AKMT3
ZNF302
GOLGA5
RHEB
ALG1
PINX1
FAIM
CHAF1B
PWP2
LOC102724159
BRWD1
SNX27
ZNF18
MON1A
POMZP3
PSMG1
BRD3OS
FTH1
RGPD8
RGPD5
RNASEH1
SAR1B
GGA2
STRN
STMP1
TMEM167B
SLC24A1
INTS14
MAOA