ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652930 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◢ CPSF6: Average

◢ SRX13652927: HeLa

◢ SRX13652928: HeLa

◢ SRX13652929: HeLa

◣ SRX13652930: HeLa

◢ SRX8945050: U2OS

◢ SRX8945056: U2OS

◢ CPSF6: STRING

POLG
ZNF839
POLR2J3
PPEF1
NDUFS7
DPH7
POLR3E
B4GAT1
PRMT5
SACM1L
GTF2IRD2B
TRIP13
BRD9
GSTA4
NOTCH2
KNL1
SHF
SLC39A13
QSOX2
KIFBP
NELFB
LRRC37A3
METTL26
JRK
HSPA6
ANTKMT
LTA4H
BRIX1
RPS29
ILF2
ICE1
POLR2D
RRN3
TIA1
ATXN7L2
PRSS27
NDST2
PAIP1
FBXO4
RPL37
NADK2
PGBD2
PARG
NOXA1
MARCHF6
CNBP
GTF2H2C_2
GTF2H2C
C8orf37
TRIM44
NME1-NME2
NME1
COA1
PCCB
RAPGEF1
AURKAIP1
ISY1-RAB43
ISY1
CCT5
ATPSCKMT
SRD5A1
NUF2
POFUT1
PLAGL2
CENPBD1
SELENOT
ZNF84
CLPTM1L
MTF2
AHCY
XYLB
PRRC2A
DAZAP2
ZC3H7A
CDK5RAP1
RPS14
PSMD9
HPD
TSPYL2
NDUFS3
KBTBD4
DNAJC11
SERP1
EIF2A
SEC16A
C9orf163
WARS2
LUC7L2
FMC1-LUC7L2
FMC1
PPA1
RELT
ALG10B
DAP
PRCC
FANCD2
SUB1
PPP6C
CASK
ATP5MC2
GUK1
PRDM10
H2AX
ECI1
MRPS30
ZER1
FBXW2
TUBGCP5
POLD3
FBXO31
UBQLN2
H4C15
H4C14
CREG1
TMEM185B
RUVBL1
EEFSEC
SENP5
HTATSF1
MYH7B
GSS
OTULIN
SURF6
RRP15
MARCHF5
CPEB3
STX18
ATR
EXOSC10
PHKA2
LDLRAD3
ZNF622
EIF2S3
ZNF124
INPP5E
YRDC
C1orf122
TADA3
ARPC4-TTLL3
ARPC4
NFYB
WDR24
GALK2
COPS2
ATG101
TBCCD1
NIFK
RAB14
GSN
NUDT15
ZC3H10
SSNA1
ANAPC2
RELA
PUF60
RBM18
MRRF
TMEM126A
NCOA5
RAB11A
TP53BP2
RPL35
ARPC5L
MAPRE1
JUP
CELF1
SLC36A4
MIS12
DERL2
RAP1B
WDR74
CHD1L
TAF10
NUP214
PAIP2
WDR70
TMEM267
PPP6R3
IMMP2L
DPH6
GOLGA1
PRDM11
TAS1R1
NOL9
TRNT1
PGAP2
PXYLP1
DNAJC24
DCDC1
RABL2A
UBQLN1
CDKN2AIPNL
CNNM4
PRKAB2
IQCH
AAGAB
ZBED8
HILPDA
FUS
UFC1
SFT2D3
EIF1
MPHOSPH6
ATP6AP2
BCAR3
SLC44A1
NOD1
WDR33
ZNF143
ARMH3
C5orf51
TOR2A
ZNF326
RBM15B
DCT
RAE1
TBC1D13
TMEM68
TGS1
TSACC
CCT3
DNAJC9
PDZD2
MTRR
FASTKD3
FAM156B
FAM156A
PARL
FOXD2
MTARC2
SCAND1
PPP1R3F
CIAO3
SNAP47
JMJD4
LRRC59
MRPS34
EME2
MTMR12
CXorf58
TMEM170A
RBM28
B2M
ASB6
NARF
MRPS5
RNF220
SCRIB
RABL6
TTC9C
HNRNPUL2
ATP6V0C
HNRNPH1
RSAD1
KATNBL1
PRMT6
TAF4
TARBP1
BMS1
TMEM199
POLDIP2
TMEM9B
RPGR
JMJD8
EIF1AD
BANF1
HGS
ARL16
TM2D3
SDHAF2
CPSF7
ST3GAL3
DSTYK
TGFBRAP1
TATDN3
NSL1
OST4
YAP1
CDK20
C18orf25
ZNF107
PSMD3
MMUT
CENPQ
MTCH2
GOLPH3
NME2
PMF1-BGLAP
PMF1
PDCD6IP
KLHL35
DCPS
SDHAF1
WDR36
AP3S2
ZFP62
TARBP2
HCCS
DUS3L
ZNF341
CNTRL
C5
GCFC2
SLC35A3
PPIL1
PHF8
URB2
TAF5L
CEP55
CXCL2
POMZP3
STX16
FUBP3
CRY2
RMND5B
FTSJ1
FYCO1
SELENOS
NCOA4
SARAF
BUD13
TIMM10B
ARFIP2
HENMT1
EXOSC6
C9orf16
MRPL44
MRPL17
TUBGCP3
CSTF1
AURKA
NDUFC2-KCTD14
NDUFC2
ARFGAP2
NUP160
NECAP2
FAM168B
RNF114
LRIF1
ALKBH3
MAPK8IP3
NBPF1
RPP40
TM9SF4
RPLP1
NSA2
GFM2
PRDX4
MYO9B
HAUS8
CALM1
LIX1L
MAK16
EXD1
CHP1
ELAC1
PELP1
EIF4EBP2
SLCO4A1
CHERP
WDR5
KIAA0895L
TVP23B
RCE1
YTHDF1
ROMO1
NFS1
ACTB
UQCC2
TENT4A
TRIM28
MBTPS1
VPS45
CTTNBP2
PARP1
MEF2A
ZNF593
C1orf232
SETD3
CCNK
SEC61B
ALG2
PPIF
ATG16L1
B3GAT3
ALDH1A3
LIN9
MAOA
MRPL21
IGHMBP2
CAND1
UBE2G2
BICD2
ABCD3
NMNAT1
LZIC
TMEM126B
DLG2
BRPF1
STARD7
PDE7A
GAPVD1
RNF141
PLD3
C19orf47
RPP25
PDCD6
ADK
MKRN2
TAF1B
PRKAG1
EEPD1
FKBP9
ZNF783
ERCC3
PRKAR1B
OSMR
MTMR9
USP47
IPPK
SMC1A
RIBC1
DDX46
TBK1
ANKS6
PPOX
KDM1A
PPM1G
PNMA1
SECISBP2
MPP5
SPATA33
UGGT1
DCP1A
ZNF79
TNKS
MYO10
COMMD1
CCT4
WDR4
MRPS24
PTGES2
NDUFAF3
DALRD3
SUV39H1
FAM228B
CBX1
SF3B6
CEBPA
RPA2
CEP295
ZDHHC5
SPAG9
CCDC83
CAT
SRRT
SKP2
LMBRD2
ATP6V0A2
TOPBP1
TF
TRIM65
RBM14-RBM4
RBM14
NOS1AP
PYCR2
DCLRE1B
AP4B1
TRAF6
RAG1
AMACR
THEM4
IBA57
LIFR
NOTCH2NLB
ARAF
CCDC34
CPLANE1
RICTOR
DGKZ
PRKAA1
NTMT1
COA6
POLE4
XRN1
SMG5
TARS3
PCIF1
SLC27A4
PDXDC1
SDE2
RWDD3
KIF27
MAPKAP1
DNAJC21
ETS1
TEAD1
GCLM
SNAPC5
NGRN
DIDO1
SETX
CLCC1
ATP5F1E
SYNRG
PHF20
EGLN1
TMEM222
KIF21A
DIP2B
IPP
CTR9
DRAP1
C11orf68
CCDC88A
PPIB
TAF1D
C11orf54
SEMA3C
TUT7
TMEM41A
SMCO4
FAM149B1
ECD
C6orf226
RNF7
CDC73
ARHGEF5
NR1H3
CCDC138
ACP2
STXBP3
SEC61A1
RPAP3
TRPC4AP
DNAJB12
DAB2
SYP
CBL
ANKH
TTC33
CERS5
EDC4
USP21
SCAI
DPY19L4
WDR25
WARS1
ARHGEF11
C1orf115
ANKRD36C
S100A13
CHTOP
DPP9
RRNAD1
ISG20L2
LIN7C
DTWD2
FAM162A
CCDC58
SNX19
CHAMP1
COQ7
ASH1L
ANKRD36
OTUD7B
ZNF131
NCBP3
TSKU
MRPL3
CENPH
NAT10
DISP3
GCN1
ISCA1
UBAC1
H3-3B
LRRC58
EIF2D
PCBP2
SRSF6
MRPL38
FPGS
ABL1
PARVA
LPCAT1
SLC35F5
NBN
ZBTB26
DYNC2I2
ADPRHL1
DGAT2
SLC35C2
ARFGEF2
CHMP7
MADD
ZYG11B
GXYLT1
DEDD
SNAPIN
RHOT2
TOR1A
USP2
TTLL11
NIPBL
RPS3
TRAP1
FAM102B
DYNC1LI2
DDI2
VPS4A
CPPED1
PUS7
POR
PSMD4
ATG16L2
HMGCS1
CDK5RAP2
TPRN
SURF4
CLYBL
SPIN1
TSC1
GFI1B
PPIA
LOC100287896
LIPT2
MXI1
LUC7L
NLRX1
VDAC2
NDUFAF6
GMPS
SH2D3C
EBAG9
TMEM141
FAM3C
SPOUT1
TIMELESS
GFM1
AARS2
USP15
SMARCB1
GET4
STOM
DHX36
CZIB
NCOA3
H4C12
ZFAND4
CSRNP2
WDR13
TTC23
LRRC28
EED
SPTAN1
IQGAP1
PDCL3
OXCT1
DCXR
SENP1
PFKM
MMP24OS
MMP24-AS1-EDEM2
TXNDC11
JRKL
CIZ1
CCDC82
PREX1
AVPI1
REXO4
FAM133B
HMCES
CREBZF
STRBP
DESI2
AKIRIN1
PANK3
RABGAP1
SLC35E2B
GTF2A2
C1orf53
MANBAL
GHITM
THOC3
THAP12
GVQW3
SYS1
ITGB5
YY1AP1
MAN2C1
DAP3
PTGER4
TKFC
SEC24A
DDB1
TIPRL
GDF5
CEP250
NUDT4
NOTCH2NLA
HNRNPF
PRC1
ZNF202
CEP126
USP20
FXN
C9orf78
SIRT1
ACER3
USE1
OSER1
TOR1B
SVBP
ERMAP
CIPC
RXYLT1
ZMPSTE24
CSE1L
PDHX
MED10
APIP
GEMIN8
B3GALT4
ZNF239
SS18L1
PSMA7
ARL6IP1
RC3H2
EXOC3
PRPF19
SDHA
CCDC127
GOLGA5
CREM
ADPRS
HMBS
ZNF487
CRBN
EFCAB2
ARHGAP29
IPO13
ERCC6
POLA1
COG2
BCAP29
P4HA3
FAM76B
CEP57
SPPL2A
CDC16
C7orf25
TAF15
LIMS1
DNM1
ARHGEF35
MRPL48
TSPAN10
SAMD8
NPLOC4
INKA2
DDX20
BASP1
FBXO22
ERCC6L2
SCYL1
UBE2V2
NOMO2
NUP133
ADO
ITGB1BP1
CPSF3
TMEM14B
SEC11A
PYGO2
PARK7
LOC101928120
ZNF774
H3C13
H2BC18
UNC50
COA5
RAB22A
PSRC1
CLTC
RNF19A
SPECC1L
PANX1
ZFX
FUT11
ZBTB34
TRIM33
SP1
POLD2
ANKRD40
SEC13
ARHGEF1
ZNF408
TMEM87B
ARHGAP1
EPHX1
DYNLRB1
B4GALT7
SRSF4
MICU2
H2BC21
H2AC20
GPSM2
CLASRP
ZNF652
RBM6
TSNAX
CBWD2
GRSF1
GINS4
KCTD5
ARL8B
SF3A1
LEMD2
FAM227B
DTWD1
CCDC157
KLHL12
ABCA3
SLC2A8
RALGDS
COA7
ZNFX1
RNPS1
PTPN1
FCHSD2
C6orf89
MCU
TMCO3
DCUN1D2
CHMP4B
VPS37C
ANGEL1
NOTCH2NLC
NLE1
AGL
PSMF1
MARK1
ZNF195
TSN
SREK1
RTF2
TBRG1
FRA10AC1
ADSS2
VPS26A
ENDOD1
FDX1
CFAP410
TEX261
PPP1CA
DLGAP4
CLPB
SNRNP200
ZNF740
NDUFAB1
CSAD
SUMF2
SLC20A1
FH
RPN2
PTAR1
MRPS16
MROH8
PPARD
ROPN1L
CEP63
ANAPC13
NAA60
ANKRD10
NDUFS6
ASNS
UHMK1
PAXX
COX5A
TAB3
HLCS
ASH2L
SRP9
NOMO3
FLOT1
EEF2K
AHCYL1
ACOT7
RHEB
PIP4K2B
SRRM2
AMOTL1
MSTO1
ZMIZ2
ZNF76
ANKRD36B
ADI1
SMARCD1
APPL2
UPF1
UGCG
URGCP
UBE2D4
PMPCA
FAM207A
ENTR1
DNPH1
SDC4
PSMG1
MBTPS2
CAPN2
FAM118A
MRPL40
HIRA
ELOB
ATF7-NPFF
ATF7
SLC35F3
SRGAP1
HACD2
STAG1
POGK
DR1
CYBC1
COMMD2
CCDC97
UAP1
SSU72
RNF14
DPP8
BRD3OS
AFF4
TMC7
OVCA2
ZNF485
GATAD1
DOLPP1
CARMIL1
ATMIN
MOSPD2
FANCB
ZDHHC17
PSEN2
ERI1
RAB8A
GALNT18
DDB2
MYLK
LANCL2
GNPTAB
ZFR
CAPRIN2
TP53I3
SNF8
VDR
OPN3
CMBL
CHML
TFAM
ACACA
TECPR2
RAP1A
CINP
CD99
CCDC91
ACAD9
JAGN1
GMEB2
PPP2R3B
CUL2
TM7SF3
RASA2
BOLA3
MTCH1
ANKRD33B
ZNF697
XPNPEP1
TTC4
SRCAP
NIT2
LOC730183
ZNF488
TMEM132A
SAYSD1
MRTO4
EMC1
TNPO1
SART1
PIK3CB
GTF3C5
CA5B
CTNNAL1
MTHFS
LINS1
BAG2
ASB7
NUP188
H2AC21
DOLK