ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652958 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◣ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
ZNF143
POLR2J3
ZNF76
IL7R
PDXDC1
ARRDC4
NR4A1
HYAL2
HSPE1-MOB4
HSPE1
HSPD1
ATXN7L2
HHIPL1
CCDC85C
FAM53C
CDC25C
DAGLA
NNMT
SRI
HNRNPA2B1
CBX3
PSMC3
SLC39A13
HARBI1
ATG13
FGGY
TSR3
GNPTG
STRBP
GPR137
BAD
ATR
TBL1X
GBA
DYNC2I2
C5orf51
COA1
TXNIP
NUDT3
RIN1
SLC35E2B
WASF2
SNX15
RCOR3
RAB22A
ATG101
BIRC3
CMSS1
KRT8
ERCC1
H4C15
H4C14
SS18L1
PSMA7
RPN2
MROH8
PIK3R3
MAZ
IQCH
AAGAB
NEK2
YY1AP1
DAP3
EIF2S3
OTULINL
BRIX1
HAX1
HEXA
ATF7-NPFF
ATF7
FOS
GTF3C5
TEAD1
STX16
S100A2
SLC25A25
NAIF1
H4C12
EIF3F
NR6A1
EIF2D
CD55
KAT5
RHOT2
SPNS1
RFX1
TSC1
GFI1B
H1-2
MAOA
CPA4
HNRNPF
ZNF687
WDR70
POLG
HAGH
FAHD1
PDE4D
AMDHD2
LAMP1
GLIS1
GFM1
UBE2B
CDKL3
GTF2IRD2B
AGAP11
TSFM
NAGPA
PDK2
ALDH18A1
BRPF1
CDON
MFSD12
S100A16
USP2
FLOT1
RAPGEF1
SFSWAP
ARL8B
GPRC5A
RBM48
PEX1
PRKCZ
CDIPT
UBC
THEM4
DNAJC11
KIF1C
INCA1
ADPRS
ANKRD13A
COA6
PRKCI
CUL2
ZC3H6
ISY1-RAB43
ISY1
PPP1R13L
POLR1G
SCAND1
NOL8
CENPP
MRPL48
AURKAIP1
SETD1A
WDR43
ARFGAP2
P4HB
SLC41A3
NEURL2
CTSA
TMEM185B
CLPTM1
FAM156A
FAM156B
DNAJB12
TSN
NADK2
POR
SURF6
KCTD5
ASB6
FBXO4
CAPN2
ATL2
SEMA3B
LRRC37A3
CYP1B1
ATAD2
NDUFS3
KBTBD4
CLTC
CENPN
CDK1
EIF3B
NUP155
TIGD5
EEF1D
RPL37
ICE1
WASHC2C
ZNF341
RPL26
POLR2J
UBE2I
PPIB
PHF1
JUND
GCDH
NDST2
SLC39A10
AAAS
SUMF1
SSNA1
ANAPC2
NELFB
DISP3
DOHH
RPS26
AMOTL1
TRMO
USP15
USE1
INTS4
DDX17
CRBN
MYL12B
ROBO1
TMEM222
GNAS
CNEP1R1
TSEN54
CASKIN2
SUPT7L
SLC4A1AP
TRIP13
BRD9
NDUFB1
CPSF2
PTDSS1
MTERF3
TSR2
ZNF335
MRPS30
DDX18
PIMREG
ATG16L2
CDCA7L
DNAJC9
CLCN7
RELA
ASH1L
WDTC1
DGAT2
CDK5RAP2
LMNTD1
KCTD11
CALM1
BAZ2A
INAVA
ZFAND3
CEP295
CTCF
RPS20
SNAPC5
WARS2
NR2F2
QRICH1
VIRMA
SMIM12
SCAF11
H3C3
OSMR
MYO9B
HAUS8
TRUB2
COQ4
TMEM260
COG2
CFAP20
EFCAB14
NSFL1C
RNF103-CHMP3
RMND5A
CELF1
DIP2A
AVPI1
ZBTB26
GIPC1
RPLP0
TPK1
PMVK
C1orf226
PHF19
OXR1
ZZZ3
C1orf174
HMCES
HNRNPH1
PRSS27
ARFGEF2
SYT7
NAA60
SLC35B1
PCCB
PPP2R5A
DPH7
POLA1
QSOX2
INTS7
DTL
ZBED5
MGST3
LRATD2
RHOBTB2
RETREG1
PPCDC
VPS33A
PPWD1
CENPK
CDK16
IBA57
RBM8A
GNL3L
B3GALT4
RALGDS
DAB2
PPP4R3A
S100A13
CHTOP
LRPPRC
FUS
ITGB1
C6orf226
PPP6C
ZCCHC4
SYNC
DOLPP1
MTCH2
DYNLL1
PRDM11
DDX46
TSKU
GRIPAP1
NOLC1
ANKRD33B
MARCOL
WDR74
RPS14
PDHA1
AXL
C21orf91
SLC33A1
BRWD1
PPP5D1
CALM3
ZNF131
UBE3B
LY6K
FZD1
SPRING1
RNFT2
ZNF219
NUF2
TBC1D13
NCBP3
ARL6IP1
MVK
ZER1
VDAC2
ZC3H10
CD59
ATP6V0C
RALY
PDZK1
HES1
JRK
MTRR
FASTKD3
MMP24OS
MMP24-AS1-EDEM2
NOCT
DHX8
CALM2
KRT80
MARCHF8
TOR2A
TMEM203
NDOR1
ETV6
CDKN1C
PMF1-BGLAP
PMF1
MET
PEX3
ADAT2
AFF4
NEDD4
POLR1H
H3C15
H3C14
H2AC19
H2AC18
TMEM18
SRPRA
CHCHD5
WDR25
WARS1
ZFP64
KLF4
PHPT1
INPPL1
XPO7
FUT11
NSUN4
DPY19L4
DIDO1
TOR4A
PIP4K2B
PFDN4
RNPS1
TAMM41
ASH2L
ITPRIP
EFCAB2
TARDBP
PAIP1
SEPTIN7
COPS7B
HEMK1
SLC20A1
CLCF1
PHKA2
SDE2
USF1
RFESD
DDX41
RRNAD1
ISG20L2
WDR5
U2SURP
RXRA
NDRG1
YJU2
USP36
BZW2
ANKMY2
NCOA5
INKA2
DDX20
CFAP221
ANTKMT
ZNF503
ARMC1
LANCL2
PTGER4
KIF27
ECT2
RPL5
ACBD6
GUK1
AMOTL2
HIBADH
ATF3
MSTO1
MRPL21
IGHMBP2
TADA1
UBQLN1
DTWD2
SUPV3L1
CREM
STK35
SMAD7
GATB
EIF4A2
NUP214
TPRA1
LRCH4
FBXO24
ARMH3
GIPR
TMEM41A
DMAC2
DNAJC16
HIF1AN
ZNF774
COQ7
PCBP2
PLEC
DICER1
E2F8
H2AX
DCLRE1B
AP4B1
NDUFS7
SKA2
PRR11
OLFM1
SMG7
MRPS18B
ACOT1
SSBP1
WDR53
FBXO45
HACD2
BUD13
CYP20A1
CYCS
FCHSD2
MUC13
UQCRC2
ANKRD36C
SLC25A45
LRP6
CCDC97
PCIF1
CENPF
SRSF3
XXYLT1
SCYL3
ZFPL1
CDCA5
THG1L
UMPS
STARD7
MPND
EIF4G2
ZC3H7A
EPC2
CABLES2
ATMIN
PSME3
NUDT9
TOR1A
RAD23A
KDM5C
CCNL1
ALG10
ZDHHC6
VTI1A
PDCD6
POLE3
C9orf43
ALDOA
RBM14-RBM4
RBM14
HNRNPD
C18orf63
SURF4
RCAN1
HASPIN
SZRD1
PUS10
PEX13
NECTIN3
VPS11
TLE1
SRSF11
LRRC40
SLC25A53
TMEM9
NME1-NME2
NME1
RAD51AP1
C12orf4
EXD1
CHP1
SMC3
OAZ3
MRPL9
MAPK8
NARF
CCT5
ATPSCKMT
C2orf42
SMG5
LAMTOR1
ARAF
PPOX
GALNT10
SF3B6
FAM228B
C22orf39
BAZ1B
DCTN4
FURIN
USP9X
AKIRIN1
AP3S1
PARVA
TMEM170A
PPP2R3A
B4GALT7
SLC6A9
DDB2
THUMPD1
PAXIP1
BBS1
PIH1D2
NKAPD1
SDC4
SUMF2
TMIE
ALS2CL
SIDT2
ELOB
RWDD1
EPRS1
MED23
UNC5B
SMARCD1
PTCD2
MRPS27
ZRANB3
R3HDM1
RNASEK
HDAC6
CCDC124
PEX11B
CSTF3
TIMM10
SMAD3
OSBP
ARL1
SYNRG
BNIP1
CAPRIN2
MINDY2
ATXN7L3
CDC23
ARHGEF1
SRD5A1
MAPKAPK5
ITGB3BP
EFCAB7
IFT140
CRAMP1
TCF3
ZNF185
ACOT9
RNF214
PCSK7
EIF4A1
PELP1
ARL4A
ZNF212
ZSCAN32
ZNF174
IFT52
NOTCH2
LARP1
MTMR12
SLC35A4
APBB3
SLCO4A1
STK17A
CACTIN
PSMB7
NVL
SLC25A10
SNRPG
PYCR2
NBN
MCOLN1
LRRC8A
KYAT1
NRAS
PRDX1
YY1
SH3BP4
RCE1
SECISBP2
NOC4L
DDX51
DCXR
ATP8A1
SELENOH
ATF6
IL18
TACC1
PRKDC
MCM4
VEPH1
SMIM6
AKT2
MFSD4B
ZFAND2A
DPP8
SMPD1
ELP5
CTDNEP1
NMNAT1
LZIC
PANX1
MCM7
AP4M1
NDUFC2-KCTD14
NDUFC2
ZNF524
FIZ1
USP12
SMN2
SMN1
TIMM50
ARNTL
ZNF668
ZNF646
PYGO2
LOC101928120
SIRT4
CTSS
FLCN
SLC36A4
TAF4
SAR1B
TENT4A
TMEM201
TBL3
SKP2
LMBRD2
KLF13
SYPL1
POU2F3
GABPB2
MSMO1
C1QBP
SAC3D1
WFDC3
DNTTIP1
ETS1
LPCAT3
TCF19
CCHCR1
TFRC
MEF2C
SFT2D3
FOSB
PPP1R37
PHAX
DTNB
YTHDF1
MUC1
KNTC1
COPS7A
PRC1
KDM4D
CWC15
SLC25A3
MSLN
GUCA2A
MXRA7
KDM3A
KRT78
ATAD2B
STK4
NTMT1
CXorf58
LIN7C
STX18
DPP3
UBE2C
SH3GL1
ZBTB38
TM2D3
C1orf115
TOMM22
SF3A3
HSPA9
TCTEX1D4
BTBD19
ZNF2
H4C3
GAPVD1
KMT2D
GCLM
TRMT61B
TK1
INAFM2
RPL38
TXNRD1
AP3S2
LMNB1
XRN1
SKIL
TGFBR2
TM9SF3
MBNL1
HMGCS1
PINX1
TAS1R1
NOL9
PHRF1
MAD2L2
NLE1
C19orf53
EPOP
MPV17L2
RBM4
NR2C1
WDR13
RBM18
MRRF
OPA1
MRPL42
TMEM132A
GABARAPL1
RAB5B
GFOD1
SRCAP
LOC730183
DDT
DDTL
UBE2Q1
FNTB
ACAP2
DIABLO
RFWD3
ATXN1L
SNAI1
LOC101928841
LAMTOR5
FAM3C
PDE12
C12orf43
H3C13
H2BC18
USP54
EIF2S1
ATP6V1D
H1-5
CIZ1
KRT17
GATAD2A
NOC2L
UBALD2
SUSD1
NUP85
ADPGK
CEP63
ANAPC13
RRP15
EED
ATP5MC2
APOLD1
SIVA1
SH2D3C
PRR5L
CWF19L1
STK40
KCTD9
CDCA2
HNRNPUL1
TDP2
ACOT13
TUFM
SH2B1
WNT1
SENP1
PFKM
TRIB1
CSTF1
AURKA
POLR3B
CNTRL
C5
SRP9
C12orf57
C1orf53
NDUFB3
FAM126B
TRIP4
PARP1
DHX16
SLC49A4
HSPBAP1
ZYX
NIFK
CNOT6
MIA3
ZNF622
PTGS2
APEH
TTLL7
SART1
BCAR3
WBP1
HECTD2
MTCH1
FBXW2
TRIM44
COA8
BAG5
NXF1
TMEM131
IFRD1
SSBP4
PPP1R21
C2orf49
NDUFAB1
PLD6
CDK11A
NPM3
VWA7
UROD
HECTD3
HRH1
THAP12
GVQW3
COPS4
POLE4
SAP30BP
RECQL5
ARMC8
NNT
SP1
TCTA
RHOA
ATAD3A
UPP1
ALDH4A1
NSA2
GFM2
NCAPD2
MRPL51
KAT8
RAB5IF
SEC14L1
TIMP1
GTF2H2C_2
GTF2H2C
HGSNAT
OTUD7B
BOLA3
PRRC2A
KPNA7
KANSL1
CLPTM1L
MED24
ZNF593
C1orf232
UBB
RNF114
UFD1
CDC45
SRSF2
MFSD11
GHITM
TCEANC
GGA2
PKP2
MARCHF6
TOM1L2
DRC3
ALDH7A1
ANKRD1
FAM83D
TXNDC11
USP31
SPECC1
FRAT1
AARS2
TMEM9B
ULK4
B3GAT3
ALG1
GMPPB
RP1L1
IQANK1
FAM83H
CCDC34
MTF2
PRMT3
PDE7A
KATNB1
SP2
ACAD9
VGF
PSRC1
HM13
ZNRD2
ZSWIM7
TTC19
HUS1
DUS2
DDX28
SLC3A2
GPX1
PARK7
KIF21A
LPIN1
AP1G1
CLUH
ZNF181
NDUFS6
BLOC1S1
GRN
CUL7
RBM3
UBP1
SLPI
SENP8
MYO9A
PSMB8
EIF1AD
BANF1
TAGLN2
SRSF4
CCNT1
BMS1
PSMD5
IARS1
CPLANE1
LIMS1
AMACR
ABCB8