ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652960 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◢ SRX13652959: HeLa

◣ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
ZNF143
POLR2J3
ZNF76
HSPE1-MOB4
HSPE1
HSPD1
IL7R
ATXN7L2
HYAL2
DAGLA
PDXDC1
NNMT
STRBP
HNRNPA2B1
CBX3
HHIPL1
CCDC85C
SETD1A
SLC35E2B
FAM53C
CDC25C
PSMC3
ARRDC4
HARBI1
ATG13
GPR137
BAD
FOS
SRI
ALDH18A1
NUDT3
GCDH
CD55
METTL1
EEF1AKMT3
SLC39A13
ATG16L2
NR6A1
TSR3
GNPTG
IBA57
WASF2
SNX15
TSC1
GFI1B
GFM1
IQCH
AAGAB
RPN2
MROH8
FGGY
COA1
OTULINL
MRPL48
BRPF1
WDR70
NR4A1
SSNA1
ANAPC2
OSMR
CPA4
GTF3C5
ATG101
ZNF687
DNAJB12
HAX1
PPP1R13L
POLR1G
RALGDS
C5orf51
MARCOL
CD59
NOL8
CENPP
CDCA7L
USP15
CALM1
ATF3
CUL2
SPRING1
RNFT2
WDR25
WARS1
FAM156A
ISY1-RAB43
ISY1
KMT2D
NDST2
GIPR
TRIP13
BRD9
S100A13
CHTOP
TSN
NEK2
FAM156B
ATF7-NPFF
ATF7
SLC25A25
NAIF1
TSR2
NUP155
CDIPT
UBE2B
CDKL3
DDX17
DISP3
MTCH1
SEPTIN7
ANKRD13A
DNAJC11
WNT1
TSFM
RCOR3
COQ7
FRAT1
SLC39A10
SFSWAP
ATL2
CXorf58
EIF2D
RAB22A
EIF3F
HDAC6
PARK7
GTF2IRD2B
PMVK
IFT140
CRAMP1
ZNF212
GLIS1
BRWD1
SUMF1
WDR74
TADA1
UBE2I
DYNC2I2
LANCL2
NDUFS3
KBTBD4
ZNF668
ZNF646
KNTC1
NTMT1
PRKCZ
PEX5
MBNL1
C2orf49
ATP6V0C
TRMO
DDX18
NELFB
ZNF219
TXNIP
HSPA8
CDON
CYCS
CDK5RAP2
ZNF408
ARHGAP1
TMEM41A
NADK2
TIGD5
EEF1D
SH3BP4
TBL1X
ZC3H6
KIF1C
INCA1
MAP2K3
DPH7
GTF2H4
UBE3B
RBM18
MRRF
GNAS
MFSD12
DICER1
STK17A
RNF7
ATR
XPO7
CALM2
LRRC37A3
DGAT2
PRKCI
LRPPRC
MUC13
FUS
PAIP1
C18orf63
ALG10B
LMNTD1
BRIX1
ASB6
PCBP2
NDUFB1
CPSF2
DPAGT1
PHKA2
USP2
ARAF
GBA
PIK3R3
GPRC5A
SLC33A1
DMAC2
EPB41L5
CCDC59
BZW2
ANKMY2
PIP4K2B
NARF
POLA1
SRXN1
GUK1
AKIRIN1
LAMP1
WASHC2C
QSOX2
PTDSS1
MTERF3
ZFAND2A
ATAD2
BIRC3
PDZK1
CDK1
ICE1
ASH1L
FAM133B
RRP1
TBCE
EIF4G2
EIF1AD
BANF1
ISG20
NIFK
PRKCSH
CCDC151
RAPGEF1
RPL26
RPS26
HEMK1
ZDHHC6
VTI1A
PDE4D
GCLM
CYP1B1
SPNS1
TMEM185B
C21orf91
RBM8A
CAPRIN2
H4C15
H4C14
ACOT7
BOLA3
JUND
RPLP0
LMNA
MRPS23
MIS12
DERL2
STAT3
PSMB7
FEM1A
NR2F2
TMEM203
NDOR1
SS18L1
PSMA7
MRPL27
EME1
POLG
ZC3H7A
STX16
C1orf226
PHRF1
COPS7B
SECISBP2
PSME3
PPIB
DNAJC9
WDR13
KIF21A
TTC9C
HNRNPUL2
KCTD9
CDCA2
TRIM44
POLR1H
PMPCA
ENTR1
PAXX
ENSA
POLE4
HES1
THUMPD1
ANKRD36C
PURB
DAB2
PPP1R18
SLC35E2A
FGD4
WDTC1
NR1D2
NKIRAS1
HPS5
GTF2H1
ARFGAP2
TMEM9
CENPN
ETFBKMT
MDC1
RCE1
SURF6
CDK9
ZFP64
POR
DOHH
OGA
NAGPA
CAPN2
RBL1
USP36
DOLPP1
INAVA
ITGB3BP
EFCAB7
TSKU
OLFM1
PIH1D2
NKAPD1
DGKZ
TCF3
CRBN
NBN
RAD51AP1
C12orf4
CEP63
ANAPC13
RHOBTB2
ATF6
KRT80
CSTF1
AURKA
CCDC97
ECT2
PDCD6
STK40
CPSF1
RIN1
SLC25A53
TBC1D13
FBXW2
USP42
ROBO1
VPS37A
CNOT7
PRDM10
ETS1
EED
CKAP2L
PPP5D1
CALM3
ITPRIP
NME1-NME2
NME1
CSTF3
ZNFX1
FCHSD2
NCAPH
NUP214
C19orf48
H2AZ2
HMBS
TP53BP2
COA6
GRIPAP1
TPR
ODR4
SF3A3
CENPBD1
ERCC1
JRK
EFCAB2
LRRC8A
KYAT1
ADPRS
FBXO4
AAAS
PAXIP1
CTSS
PTCD3
POLR1A
RSF1
AAMDC
ARL8B
EIF4A2
PRR5L
SLC35B1
SRPRA
MTCH2
DTWD2
RNF114
AGAP11
H2AX
PPIA
PHF8
YY1AP1
DAP3
WDR43
USE1
RCAN1
NSFL1C
SKA2
PRR11
MAPRE1
PPP4R3A
FAM161B
COQ6
MARCHF6
PCCB
CCDC34
ZNF185
C1orf53
MT2A
MYO9B
HAUS8
RFX1
TAGLN2
EBAG9
MRPS2
C9orf116
ZNF263
NUF2
LPIN1
MIA3
RAB5B
TMEM9B
ZNF487
CDK5RAP1
SSBP1
CDIP1
ARL14EP
COX20
NGRN
TXLNA
FOXN2
C12orf73
TEAD1
FOSB
PRPSAP1
HNRNPUL1
SCAND1
ZNF131
VDAC2
ASH2L
CLYBL
ENDOV
CIAO3
ZNF777
SEC22B
EPC2
NEURL2
CTSA
UBC
CHMP7
ETV6
DPP8
RRN3
DDT
DDX41
SUB1
HNRNPA0
RMI1
HNRNPK
VPS33A
AARS2
HASPIN
PEX11B
ISCA1
COG2
PRRC2B
SRP9
GFOD1
ZNF341
LRP6
TRIB1
POLD2
SCRIB
CEP126
RBM3
PFDN4
GALNT10
HACD2
UBB
THAP12
GVQW3
MET
RUVBL1
EEFSEC
MAOA
NOCT
APOLD1
GPATCH3
SMC1A
RIBC1
ZFP14
POC5
RPL22
USF1
NSUN4
NCOA5
PMF1-BGLAP
PMF1
NDUFS6
AMN1
MTMR14
BAZ2A
HRH1
CENPF
SRSF3
PPP1R37
ZNF2
NMNAT1
LZIC
SREK1IP1
CWC27
SMG5
THEM4
TSEN54
CASKIN2
PPOX
PSMD4
TRAPPC3
MAP7D1
TCP11L2
HNRNPF
P4HB
CCDC124
OXCT1
NVL
SLC35A5
ATG3
SAAL1
MRPL42
USP9X
BNIP1
RWDD1
NUDCD3
C17orf49
APEH
CSNK1D
SLC20A1
AKR1B1
COPS7A
ZNF181
POFUT1
PLAGL2
NLE1
COMMD2
ZNF335
TRUB2
COQ4
NOTCH2
SREK1
CLUH
PPP2R5A
PRDX4
LSM4
PCNP
TST
MPST
AURKAIP1
DDTL
KAT5
MYL12B
TMEM132A
ZCCHC4
SLC25A3
EXD1
CHP1
CBWD2
RNPS1
CLPTM1
TOM1L2
DRC3
SLC25A10
NIP7
COG8
DEK
EDF1
HDGFL2
OXR1
INPP5E
RPL24
NUP42
PXK
E2F8
TPK1
MSTO1
CIPC
GSN
NAV3
S100A2
SLC25A45
AXL
SRD5A1
B4GALT7
KLHL18
KIF9
AP1M1
CREM
CDKN1B
NOC3L
PRIM2
RNF220
MRPS14
TRIAP1
ZNF286A
INTS4
FLCN
SLC36A4
ACAD9
KAT6B
CNOT6
SAMD4B
GOLGA3
DPH1
SIRT4
SRCAP
LOC730183
UQCRH
LRRC41
SIRT1
SEC14L1
CAMTA1
SENP2
TOX4
RAB2B
S100A16
RPS14
RNF103-CHMP3
RMND5A
SUPT7L
SLC4A1AP
ATP5MC2
SUPV3L1
HLCS
TMEM138
CYB561A3
MAGI1
PLSCR2
PCIF1
TMEM260
CENPS-CORT
CENPS
MAP2K1
CCDC130
ATAD3A
SH3YL1
ACP1
PDHA1
TMEM267
YTHDF2
CTR9
ABCB8
THAP9
SEC31A
SPATA24
MED20
BYSL
WDR36
PKD1
FKBP3
UBQLN1
ELOB
SIVA1
H4C8
PC
SYS1
INKA2
DDX20
SRSF6
ZNF410
DDX1
KLHDC10
SURF4
UBIAD1
BMS1
IARS1
XXYLT1
KRT17
SNX19
TEDC1
GATB
USP49
TTC33
MTF2
NDUFB3
FAM126B
RNF214
PCSK7
MICU2
BMERB1
CDC23
SOS1
INTS7
DTL
HNRNPH1
DCLRE1B
AP4B1
TMEM14C
TCF19
CCHCR1
PPIL4
PXT1
KCTD20
SAP30BP
RECQL5
CELSR3
MRPS16
PRPF8
RELA
PGAP2
MORF4L1
PKD1L2
EXO1
ZFAND3
ZSCAN32
ZNF174
AP3S1
ALDOA
MSMO1
B3GAT3
ZNF326
ATF4
ARHGEF1
USP11
ST3GAL3
NOL11
C12orf65
RRNAD1
ISG20L2
STK19
DXO
PTPN14
SF3B6
FAM228B
DPP9
MED17
H4C12
PTGER4
KDM4D
CWC15
RNF187
HADHB
HADHA
FLOT1
AVPI1
SYBU
GABPB2
ZNF622
SP2
OTULIN
LEMD2
CIZ1
NECTIN3
TDP2
ACOT13
RNF19A
SLC35F5
MRI1
MRPS5
CLCC1
GNB2
TAF1B
ZNF696
PHF19
NOC4L
DDX51
PER3
GATAD2A
ZNF165
ANKRD39
MRPS15
CENPH
NTAQ1
CNTRL
C5
SLC9A8
YEATS4
INO80
CD63
RPL37
ZBED5
ZBTB26
ADK
POLE3
C9orf43
U2SURP
FAM76A
UBE2Q1
CERS5
ZNF785
AMDHD2
CNEP1R1
PYGO2
LOC101928120
MCOLN1
CFAP221
SRRM2
TAF4
RRP8
ILK
SSR3
RABL2A
GHITM
LY6K
BBS1
LRCH4
FBXO24
SMN2
SMN1
XAB2
STOM
SLC24A1
INTS14
MRPL55
HS1BP3
LSM5
COQ2
TPRA1
TCERG1
PRRC2A
NUP160
GPBP1
USP20
C9orf78
SEC13
TBRG4
NR1H3
ACP2
MGST3
TATDN3
NSL1
TK1
CLUAP1
C9orf16
STXBP3
MPP5
WDR45B
VPS50
HEPACAM2
CCDC88A
EEF1E1
TPBGL
CTNNB1
USP31
KRT16
CMSS1
CFAP20
TMEM222
GNL3L
FAM149B1
ECD
NCBP3
ANTKMT
IPO11
MLH1
EPM2AIP1
CKAP5
POLR2D
PREX1
RRAS
ZNF764
EVI5
HAGH
FAHD1
CWF19L1
SOWAHC
SEPTIN10
PREPL
CAMKMT
THEM6
RAB8A
EIF2S3
FOSL1
BMF
SLC35A4
APBB3
TMEM131
ZNF438
ABCD3
RPS12
URB2
TAF5L
ATP5MC1
SNF8
LRP12
SZRD1
MCM2
PLK3
UBFD1
EARS2
PLEKHF2
RTRAF
CPPED1
ABCA5
WARS2
RRP15
HEXA
PRC1
DEDD
GOLGA1
PTGS2
ZFPL1
CDCA5
PUF60
ABL1
ITFG2
RPTOR
NUP188
DOLK
XPC
LSM3
RTEL1
ABCF1
MAK16
HMCES
ARFGEF2
RALY
MBTPS2
C2orf42
RTF2
RPP40
THOC3
TAF1A
POC1A
NEDD4
ARMH3
TIMM17B
PQBP1
ANKRD36
NAP1L4
GALE
TNPO1
CFAP410
PLEKHM3
POLR2C
PEMT
RHOT2
LSG1
CDKN1C
STK35
TOP3A
SMCR8
RBM10
NDUFB11
NDUFA5
GSK3B
ARMC5
USP12
MTMR12
INAFM2
MAP3K1
ALDH7A1
TM9SF4
FAM162A
CCDC58
HBP1
MTHFS
MRTO4
EMC1
BROX
AIDA
ZNF503
ARL1
ZNRD2
MED14
CHAMP1
PLAG1
CHCHD7
DNAJC30
BUD23
MRPS21
DEPDC1B
NCDN
KIAA0319L
COMMD6
AMACR
TM2D3
NAGK
ZNF783
CBWD5