ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652958 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◣ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
DUX4
SNX12
LEKR1
DRAP1
C11orf68
ZNF143
POLR2J3
GAS8
NUP160
ZNF76
IL7R
GDA
PDXDC1
ARRDC4
NR4A1
TUSC2
HYAL2
HYAL1
KRT34
HSPE1-MOB4
HSPE1
HSPD1
FRG2C
PADI2
CYB561D1
ATXN7L2
MTRNR2L1
ZBTB38
HHIPL1
CCDC85C
FAM53C
CDC25C
DAGLA
BHLHE40
KCNJ15
PPDPFL
NNMT
SRI
KRT10
ITGB5
HNRNPA2B1
CBX3
PSMC3
SLC39A13
HARBI1
ATG13
FGGY
ITPK1
TSR3
GNPTG
C11orf86
CD22
STRBP
CSGALNACT1
PTGES
TFAP2A
KCNK4
GPR137
BAD
ATR
BIRC7
CARD16
VSIR
TBL1X
TM4SF18
GBA
DYNC2I2
FLYWCH2
C5orf51
ASB2
RARRES1
COA1
KRT86
TXNIP
NUDT3
RIN1
BRMS1
BCAS1
SLC35E2B
WASF2
DUSP5
SNX15
RCOR3
RAB22A
PLAU
SMIM41
ATG101
BIRC3
HMG20B
KLRC2
CMSS1
SH3BP4
TPD52
OR10D3
KRT8
ERCC1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
SS18L1
PSMA7
RPN2
MROH8
PIK3R3
PRRT2
MAZ
NT5C2
TES
FHL2
IQCH
AAGAB
LIPK
NEK2
DDX47
TENT4A
ZG16B
YY1AP1
DAP3
TMEM250
PTPRB
TRAPPC9
EIF2S3
OTULINL
BRIX1
HAX1
HEXA
ATF7-NPFF
ATF7
FOS
GTF3C5
UBXN8
GSR
CETP
TEAD1
STX16
S100A2
AMOTL2
SLC25A25
NAIF1
FAM72C
H4C12
H4C11
H2BC15
H2AC15
EIF3F
PRKAG2
TOX2
OLFML2A
NR6A1
SZRD1
EIF2D
RIC3
CD55
RNASEH2C
KAT5
CYP27C1
RHOT2
RHBDL1
IKZF3
SPNS1
LAT
RFX1
TSC1
GFI1B
H1-2
H3C3
TXNRD1
MAOA
CPA4
PLEKHA8
HNRNPF
WFDC1
ZNF687
SCHIP1
WDR70
NUP155
POLG
HAGH
FAHD1
TOR2A
PDE4D
TGFBR2
ATP6V0C
AMDHD2
LAMP1
GLIS1
GFM1
TAF12
KRT31
UBE2B
CDKL3
TEX12
IL18
GTF2IRD2B
FRG2
PDCD6
OAS1
AGAP11
ADIRF
SLC16A5
EEF1AKMT3
TSFM
NAGPA
PPL
PDK2
ALDH18A1
BRPF1
CDON
MFSD12
S100A16
S100A14
USP2
IER3
FLOT1
RAPGEF1
CLDN4
SFSWAP
ARL8B
PRSS38
GPRC5A
RBM48
PEX1
PRKCZ
PRKACG
CDIPT
UBC
THEM4
DNAJC11
CITED4
KIF2C
KIF1C
INCA1
CAMTA2
LHFPL2
DYNLRB1
TEKT2
ADPRS
RIPOR2
SRGAP2
FAM72A
PKP1
GIT2
ANKRD13A
COA6
PRKCI
CUL2
ZC3H6
ISY1-RAB43
ISY1
PPP1R13L
POLR1G
SCAND1
NOL8
CENPP
MRPL48
AURKAIP1
SETD1A
ORAI3
WDR43
NIBAN2
IL24
BCL3
PACSIN3
ARFGAP2
STX1A
SLC41A3
P4HB
ZSWIM1
SPATA25
NEURL2
CTSA
TMEM185B
CLPTM1
APOC2
FAM156A
FAM156B
RAPGEF3
DNAJB12
TSN
NADK2
POR
SURF6
KCTD5
ASB6
FBXO4
NYX
CAPN2
RHOF
ATL2
C1orf198
ZNF608
SEMA3B
LSMEM2
RETREG1
LRRC37A3
CYP1B1
FAM102A
ATAD2
NDUFS3
KBTBD4
FAM180B
CLTC
CCL28
PPEF1
CMC2
CENPN
TBC1D2
CDK1
EIF3B
TIGD5
EEF1D
RPL37
CARD6
ICE1
GATA2
SNAPC1
TBPL2
WASHC2C
ZNF341
GKN1
RASSF9
RPL26
KRBA2
MALL
SMYD3
POLR2J
NCOA7
SPINT2
UBE2I
GSTA3
MEAK7
PPIB
SYNGAP1
PHF1
CUTA
SPINK4
JUND
IQCN
RNF223
TM4SF1
KLF1
GCDH
DNASE2
NDST2
SLC25A1
SLC39A10
LOC102724770
DGCR6
TRIP10
GPR108
SYT5
OSBP2
LOC388282
KIFC3
AAAS
NKD2
SQSTM1
SUMF1
SSNA1
ANAPC2
STPG3
NELFB
FAM166A
DISP3
FZR1
DOHH
RPS26
AMOTL1
ATG16L2
RALGDS
TRMO
USP15
USE1
INTS4
DDX17
CRBN
MEF2D
MYL12A
MYL12B
MLLT1
ROBO1
TMEM222
WDR13
GNAS
ANK3
CNEP1R1
TSEN54
LLGL2
CASKIN2
SUPT7L
SLC4A1AP
FOLR3
PTP4A1
TRIP13
BRD9
NDUFB1
CPSF2
PTDSS1
MTERF3
TSR2
TMC5
ZNF335
CD1D
MRPS30
SRGAP2C
FAM72B
DDX18
ATXN1
PIMREG
AIPL1
CDCA7L
MRPS16
DNAJC9
ANKRD35
CLCN7
RELA
ASH1L
SLC8A1
WDTC1
DGAT2
CDIN1
CDK5RAP2
LMNTD1
SULT1A4
SULT1A3
JAGN1
CIDEC
LGALS9B
GIPC1
TMEM95
KCTD11
MT1M
MT1E
CALM1
BAZ2A
INAVA
ZFAND3
CEP295
CTCF
RPS20
ZWILCH
SNAPC5
RPL4
SPTLC3
CCDC200
MIDEAS
NTF3
CCAR2
C8orf58
IRAG1
WARS2
NR2F2
QRICH1
VIRMA
SMIM12
SCAF11
H2BC3
OSMR
MYO9B
HAUS8
INA
TRUB2
COQ4
TMEM260
ZNF281
TNS3
COG2
CFAP20
EFCAB14
NSFL1C
SLC48A1
RNF103-CHMP3
RMND5A
CELF1
DIP2A
GYPC
MMP13
AVPI1
ZBTB26
RABGAP1
RPLP0
GCN1
TPK1
GDF15
PMVK
MGLL
LRRC20
SPATA46
C1orf226
PHF19
OXR1
ZZZ3
APOBEC3B
C1orf174
SLC6A18
HMCES
HNRNPH1
PRSS27
ARFGEF2
SYT7
NAA60
SLC35B1
PCCB
TMEM107
MMP3
NMUR2
PPP2R5A
DPH7
POLA1
QSOX2
INTS7
DTL
ZBED5
MGST3
TTLL6
LRATD2
TNFAIP8
RHOBTB2
CSRP1
ARID1A
PPCDC
DOCK5
VPS33A
PPWD1
CENPK
PDXK
CDK16
IBA57
RBM8A
PEX11B
TRIM33
ZNF598
NPW
GNL3L
VPS52
RPS18
B3GALT4
CMIP
DAB2
PPP4R3A
NT5C
PSG1
VAMP2
PER1
S100A13
S100A1
CHTOP
LRPPRC
PTP4A2
PMEPA1
FUS
ITGB1
C6orf226
PPP6C
ITGBL1
ZCCHC4
RNF114
SYNC
DOLPP1
PRSS22
MTCH2
DYNLL1
EHMT1
ARRDC1
PRDM11
DDX46
DKK1
TSKU
GRIPAP1
NOLC1
ANKRD33B
MARCOL
WDR74
STX5
RPS14
PDHA1
DPP9
AXL
CYB5B
C21orf91
SLC33A1
BRWD1
SLC35F6
PHF2
TPCN1
IQCD
PPP5D1
CALM3
KRT32
ZNF131
UBE3B
LY6K
FZD1
PRDX2
JUNB
SPRING1
RNFT2
GIPC2
MAFK
ZNF219
TMEM253
NUF2
TBC1D13
LMNA
TMEM167B
NCBP3
ARID5A
ARL6IP1
MVK
ZER1
VDAC2
TTC16
PTRH1
ZC3H10
RPL41
ESYT1
CD59
RALY
HOXC11
HOXC10
SOCS3
PDZK1
HES1
S100A10
JRK
MAP3K7CL
MTRR
FASTKD3
MMP24OS
MMP24-AS1-EDEM2
C19orf33
ARHGAP17
NOCT
DHX8
RHOV
CALM2
KRT80
MARCHF8
TPRN
TMEM203
NDOR1
ETV6
CDKN1C
ATF3
FBXO46
PMF1-BGLAP
PMF1
MET
PEX3
ADAT2
AFF4
NEDD4
PPP1R11
POLR1H
CCN5
TMEM18
MBNL1
SRPRA
GPSM1
CARD9
MANSC4
KLHL42
CHCHD5
WDR25
WARS1
ZFP64
KLF4
C1orf116
PHPT1
MAMDC4
AJM1
INPPL1
FOLR2
XPO7
DOK2
KLHL15
FUT11
CHCHD1
NSUN4
DPY19L4
TINAGL1
DIDO1
TOR4A
IQCM
PIP4K2B
WWP2
EAPP
LIFR
SPINT1
PPP1R14D
PFDN4
RNPS1
VPS13C
C2CD4A
TAMM41
ASH2L
ERI1
ITPRIP
EFCAB2
TARDBP
PAIP1
SEPTIN7
PDE6D
COPS7B
LPIN1
PLIN3
HEMK1
C3orf18
SLC20A1
PLEC
GRAMD2B
CLCF1
PHKA2
HRH1
SDE2
SSTR1
EDNRB
USF1
TSTD1
RFESD
GLIS2
CPA2
DOK3
DDX41
RRNAD1
ISG20L2
NFATC2
WDR5
U2SURP
RXRA
NDRG1
IL1F10
ELF3
YJU2
CA10
USP36
BZW2
ANKMY2
SURF4
NCOA5
INKA2
DDX20
METRN
ANTKMT
CFAP221
HAGHL
CCDC78
ZNF503
ARMC1
NTSR1
LANCL2
PTGER4
ECT2
KIF27
RPL5
MB
ACBD6
GUK1
GJC2
CHD2
MRPS10
SNAI2
HIBADH
C11orf91
MSTO1
MRPL21
IGHMBP2
VPS72
PIP5K1A
TADA1
UBQLN1
UGT3A2
DTWD2
SUPV3L1
CREM
STK35
PLAAT2
TGIF1
SMAD7
GATB
TTC32
EIF4A2
NUP214
TPRA1
MCM2
LRCH4
FBXO24
HPS6
ARMH3
TPM4
GIPR
TMEM41A
ERICH4
DMAC2
RMI1
HNRNPK
SPOCK2
DNAJC16
CASP9
NDUFB8
HIF1AN
ZNF774
LOC100130520
CD300H
COQ7
PCBP2
EDN1
GNG11
GNGT1
LAMA5
DICER1
H2AX
DPAGT1
HMBS
E2F8
PPP1R2
DCLRE1B
AP4B1
NDUFS7
EPAS1
SKA2
PRR11
OLFM1
SMG7
MRPS18B
ATAT1
GRAMD1C
ACOT1
SSBP1
WDR53
FBXO45
HACD2
BUD13
CYP20A1
LOC112267881
KIR2DL1
CYCS
FCHSD2
MUC13
UQCRC2
ANKRD36C
SLC25A45
FRMD8
ZFX
LRP6
CCDC97
PCIF1
CENPF
SRSF3
XXYLT1
LEMD2
SCYL3
DDB2
ZFPL1
TMEM262
CDCA5
THG1L
UMPS
STARD7
STAP2
MPND
TIAM2
EIF4G2
ZC3H7A
HKDC1
EPC2
FAM25G
FAM25C
CABLES2
MTMR11
ALOX5AP
ATMIN
TACC1
PSME3
BECN1
NUDT9
TOR1A
RAD23A
CALR
SRGAP2B
FAM72D
ADGRF1
KDM5C
CCNL1
ALG10
ATP13A3
ZDHHC6
VTI1A
NFE2L2
POLE3
C9orf43
ALAD
ALDOA
RBM14-RBM4
RBM14
HNRNPD
MBNL3
C18orf63
RCAN1
HASPIN
PUS10
PEX13
NECTIN3
VPS11
TLE1
SRSF11
LRRC40
SLC5A3
MRPS6
SLC25A53
FAM199X
TMEM9
NME1-NME2
NME1
RAD51AP1
C12orf4
EXD1
CHP1
SMC3
MAPK8
OAZ3
MRPL9
NARF
CYBC1
KLF10
PTPRO
CCT5
ATPSCKMT
C2orf42
TMEM79
SMG5
LAMTOR1
ANAPC15
ARAF
USP21
PPOX
FAM110B
GALNT10
SLC35A2
PIM2
TP53I3
SF3B6
FAM228B
WSB2
C22orf39
FAM193B
BAZ1B
FURIN
DCTN4
USP9X
AKIRIN1
AP3S1
PARVA
TMEM170A
ABR
PPP2R3A
TMED9
B4GALT7
SLC6A9
PLCXD2
THUMPD1
PAXIP1
MMP12
NEDD4L
BBS1
PIH1D2
NKAPD1
KLF9
SDC4
MICAL2
SUMF2
TMIE
ALS2CL
STARD13
SIDT2
PRSS33
ELOB
RWDD1
COL16A1
RNASEK
C17orf49
EPRS1
MED23
ENPP3
UNC5B
SMARCD1
PTCD2
MRPS27
ZRANB3
R3HDM1
HDAC6
ARID2
CCDC124
ITGA10
CSTF3
MYEOV