ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652959 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◣ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
DUX4
SNX12
DRAP1
C11orf68
LEKR1
ZNF76
FRG2C
GAS8
ZNF143
TUSC2
HYAL2
HYAL1
CYB561D1
ATXN7L2
HSPE1-MOB4
HSPE1
HSPD1
POLR2J3
GDA
HNRNPA2B1
CBX3
IL7R
DAGLA
SNAPC1
MTRNR2L1
NUP160
TM4SF1
HHIPL1
CCDC85C
KRT10
ARRDC4
PDXDC1
C11orf86
CSGALNACT1
FAM53C
CDC25C
ATG16L2
ALDH18A1
SLC39A10
ZBTB38
KRT34
FAM72C
SLC35E2B
SLC39A13
WDR70
NUP155
WASF2
KCNJ15
SRI
OR10D3
PADI2
DNAJB12
OTULINL
SETD1A
ORAI3
SMIM41
ATG101
ZC3H6
RPN2
MROH8
NNMT
PSMC3
ZNF687
CUL2
FOS
CD59
OLFML2A
NR6A1
FHL2
STRBP
GLIS1
LIPK
ZNF408
ARHGAP1
SNX15
XPO7
DOK2
LOC112267881
KIR2DL1
FRG2
KCNK4
GPR137
BAD
NUDT3
NR4A1
ZG16B
YY1AP1
DAP3
ATAD2
PDCD6
MYO9B
HAUS8
GKN1
DGAT2
CARD16
TSC1
GFI1B
TM4SF18
CCDC59
HARBI1
ATG13
DKK1
SPRING1
RNFT2
NEK2
GTF3C5
TFAP2A
RASSF9
DDX17
RNASEH2C
KAT5
TSR3
GNPTG
TBL1X
TBC1D2
COX20
TSN
ATR
PAIP1
KLRC2
LOC388282
KIFC3
TEAD1
BCAS1
PRSS38
MRPL48
ATF3
DYNLRB1
ISY1-RAB43
ISY1
WDR43
TOR2A
KLF1
GCDH
DNASE2
RALGDS
RAB22A
GYPC
WNT10B
WNT1
TEX12
IL18
RAPGEF1
CDK5RAP2
PRKAG2
MTCH1
TMEM41A
ERCC1
LRRC37A3
BRIX1
DNAJC11
TRAPPC9
TTC32
PRR5L
COMMD9
FAM156A
FAM156B
MBNL1
MT1HL1
PDK2
USP15
FGGY
NDST2
GNAS
TSR2
CRBN
ITPK1
C5orf51
PHKA2
LOC102724770
DGCR6
BRPF1
ITGB5
SFSWAP
EIF3F
KRT31
VAMP2
PER1
RELA
CD55
SH3BP4
UBE2B
CDKL3
MARCOL
USP36
CALM1
PIK3R3
TBC1D13
EIF2D
CDON
WDR13
SZRD1
SEPTIN7
NUF2
UBB
MAS1
GFM1
BCL3
WARS2
C1orf174
CD22
GIPC2
PDZK1
DYNLT3
SS18L1
PSMA7
LAMP1
GTF2IRD2B
ARL8B
KLHDC10
FUS
STPG3
NELFB
FAM166A
CYCS
NTMT1
C9orf50
MAFK
TBPL2
HNF4A
BIRC3
IBA57
NADK2
CYP1B1
MAOA
PCBP2
DDX47
LANCL2
JRK
SLC25A25
NAIF1
EEF1AKMT3
CALM2
SUMF1
IER3
FLOT1
METTL1
CYP27B1
C1orf198
NYX
TSFM
BHLHE40
ARID3B
MRPL42
TIMM22
KRT80
PPDPFL
DICER1
RETREG1
RIPOR2
HRH1
PMVK
CPA4
TES
MRPS16
DNAJC9
PRDM10
PPP1R13L
POLR1G
RRP15
HAX1
SSNA1
ANAPC2
GIPR
C21orf91
SDE2
ZNF674
SLC33A1
EFCAB14
SLC25A53
FAM199X
C11orf91
UBXN8
GSR
TGFBR2
USP2
PPL
POLG
TPD52
FOSB
RPS14
TRMO
SAMD9
TXNIP
CNEP1R1
DYNLL1
ATP6V0C
AMDHD2
TMEM250
TADA1
PSG1
EIF3C
ZER1
KRT86
CDIN1
SSBP1
ZNF131
DUSP5
BIRC7
KRT32
IRAG1
HEG1
EIF4A2
NAGPA
GPRC5A
KIF1C
INCA1
CAMTA2
GCLM
UBIAD1
TCAF2
FAM149B1
ECD
CITED4
CDCA7L
ASB6
VPS33A
RCE1
RARRES1
OGA
TARDBP
BAZ2A
ZSWIM1
SPATA25
NEURL2
CTSA
CEP295
VSIR
TMC5
IKZF3
TIGD5
EEF1D
DOCK5
SRGAP2B
FAM72D
MFSD2B
CSRP1
CHMP7
PRKCZ
SCAND1
PTPRB
CCL28
RPL26
KRBA2
LMNTD1
PARK7
LRP6
RBM48
PEX1
INA
PER3
SLC8A1
PPIB
CLMP
WASHC2A
SPNS1
LAT
NEDD4
PDE4DIP
SRGAP2
FAM72A
DPH7
LRRC20
TRIM55
COA6
LHFPL2
UQCRC2
DISP3
STK17A
AVPI1
DYNC2I2
FAM102A
ASH1L
NR1H3
ACP2
SPINK1
ZNF219
TMEM253
FBXO4
MAP3K7CL
HAGH
FAHD1
ARAF
AKR1B1
KAT8
BCKDK
TMEM9
PCIF1
IFT52
TCP11L2
PDE4D
AGMO
NFX1
STAT5B
ICE1
KIF21A
SHC1
PYGO2
PBXIP1
LOC101928120
RRN3
MFSD12
AURKAIP1
COQ7
ZNF668
ZNF646
TEX2
PIP4K2B
EED
RIC3
AAAS
ETFBKMT
UBE3C
PDK4
EDN1
TPRN
TMEM203
NDOR1
TMEM132A
MRPL44
OSMR
GUK1
GJC2
MTRR
FASTKD3
SOWAHC
SEPTIN10
EIF4G2
SIDT2
KLRF1
DEDD
LIPC
ATF7-NPFF
ATF7
OSBP2
TAF12
TMEM185B
NDUFS3
KBTBD4
FAM180B
TEKT2
ADPRS
HES1
PTDSS1
MTERF3
FZR1
DOHH
CFAP20
FAM133B
RHEBL1
KMT2D
ATP13A3
FRAT1
ITGB3BP
EFCAB7
MIDEAS
ATXN2
H4C12
H4C11
H2BC15
H2AC15
SRPRA
PRC1
NDUFAB1
PKP1
WASHC2C
USP49
NBN
TTC33
FAM25G
FAM25C
COPS4
CETP
NIBAN2
KNTC1
MYL12A
MYL12B
SECISBP2
CKS2
ZSCAN32
ZNF174
SSU72
TRIP13
BRD9
IL24
PRPSAP1
ING4
STX16
POR
RBM8A
PEX11B
ZNF335
RAD51AP1
C12orf4
PCCB
GABARAPL1
NDUFS7
RIN1
BRMS1
PPP5D1
CALM3
NME1-NME2
NME1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MARCHF6
DOLPP1
TMEM222
FBXW2
CACTIN
UBE3B
ZC3H7A
CNTRL
C5
UBE2V1
SRCAP
LOC730183
COG2
CLPB
DBNDD2
EBAG9
SLC35E2A
MTBP
MRPL13
PINX1
AP3S1
DAP
CPT1A
LPIN1
THAP12
GVQW3
ATP5MC2
GOLGA1
HSPA9
TXNRD1
CLTC
PPP1R9B
GBA
RAB27B
PSMD5
GTPBP8
OAS1
SRGAP2C
FAM72B
GTF2H3
EIF2B1
S100A13
S100A1
CHTOP
CLDN4
RRNAD1
ISG20L2
PRKCSH
CCDC151
PRDX4
ASB2
STX1A
ATL2
PRKCI
ISG20
PAQR8
RPAP3
NT5C2
PMEPA1
PLEKHA8
EAPP
AARS2
RFX2
CCDC68
PGBD2
UBE2I
NCOA5
ZNF367
SLC35B1
NIFK
ANXA2
IQCH
AAGAB
CYP27C1
POLA1
ZNF212
CCDC97
GRIPAP1
EPC2
C8orf33
NEGR1
TDRD9
ATP5MPL
NARF
CYBC1
SLC25A45
FRMD8
AMOTL2
PACSIN3
ARFGAP2
MTCH2
RBM18
MRRF
TTC9C
HNRNPUL2
YIF1B
KCNK6
FKBP1A
PLCXD2
EPYC
TATDN3
NSL1
PRSS22
PDE6D
COPS7B
PRMT3
FLYWCH2
EFCAB2
USP42
TMEM199
SEBOX
POLDIP2
GGA1
COA1
POLR3B
RPL5
CENPF
SRSF4
USP11
C19orf33
PTGER4
CAPN2
STAT3
CDKN1A
TOX2
GIT2
ANKRD13A
USP9X
NUDT9
P4HB
CHD2
FAM110B
NFE2L2
ARHGDIA
NR2F2
ZBED5
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
TUBB4B
SLC34A3
ZFAND3
HMCES
MTSS2
HASPIN
MTMR12
SCAI
RARB
UBQLN1
TRIB1
PISD
MRPS23
LIMA1
PYGB
ZDHHC6
VTI1A
SENP1
PFKM
CEP63
ANAPC13
TPR
ODR4
PRSS33
ELOB
PGAP2
ITGB1
FCHSD2
EIF1AD
CST6
BANF1
ANKRD36C
MRPS10
AP5S1
TMEM14B
SCHIP1
ITPRIP
PEX5
RNPS1
TRMT61B
IARS1
YTHDF2
MRPL3
ZNF341
STK4
LARP1
RAC3
DCXR
CAPNS1
IQCM
RAPGEF3
SLC48A1
QSOX2
SPRR2E
THEM4
ITGA10
PTGES2
GABPB2
MLLT11
YARS1
S100PBP
RAB5B
PMEL
CDK2
ZNFX1
TTC31
CCDC142
DOK3
DDX41
TMEM107
C5orf46
CPLANE1
TIMM10
SMTNL1
CDIPT
TRUB2
COQ4
TSEN54
LLGL2
CASKIN2
VIRMA
PARVA
MSTO1
WDR5
ENSA
TAMM41
PEAR1
INAVA
TRAM1
ECT2
ARID1A
CPS1
TTI1
RPRD1B
RCOR3
HMG20B
NDUFB1
CPSF2
RPS26
FBXO46
MUC13
LOC102723996
ICOSLG
PTGES
NOL8
CENPP
CCDC124
INPP4B
EIF2S3
SYT5
CLPTM1
APOC2
CCL20
PPP4R3A
FOSL1
CCDC85B
LIFR
SURF4
MYPN
KDM4D
CWC15
AMN1
RHOT2
RHBDL1
TNRC18
LOC100129484
SERTAD4
ANXA8L1
CLN3
APOBR
SNX19
LZTR1
WDR25
WARS1
MEF2D
SPATA46
C1orf226
SREK1
TMEM267
NOTCH2NLA
CTDSP1
SDHAF3
WASHC5
NSMCE2
NCBP2AS2
NCBP2
MLLT1
TAGLN2
KLF10
ZNF358
MCOLN1
POC1A
QRICH1
CLUH
POLD2
MGLL
AMOTL1
USP21
PPOX
CD79A
ARHGEF1
GIPC1
TIMM17B
PQBP1
TMEM9B
CBWD2
ADTRP
ARID5B
ETV4
SCAF11
MRTO4
EMC1
MAP3K1
DDX18
ETS1
DRGX
MRPS30
VPS37A
CNOT7
GPC6
BMS1
MRPS28
CCDC174
EPSTI1
ZYG11B
BRWD1
POMT2
GSTZ1
S100A16
S100A14
CDK1
RHOF
SUPT7L
SLC4A1AP
BACE2
SLC25A3
PRRC2A
AIF1
NCDN
KIAA0319L
ZRANB3
R3HDM1
MAPRE3
CLIP2
WEE1
HNRNPAB
CD1D
OXCT1
HSP90AA1
ANKRD35
SLC41A3
RMI1
HNRNPK
INTS7
DTL
DDX46
FZD1
ASCC1
ANAPC16
DDX59
CTNNAL1
SELENOS
JAGN1
CIDEC
UGT3A2
LRRC8A
KYAT1
ARFGEF2
USP12
SCYL3
RACGAP1
SH2D3C
POLR2J
CDK9
SMIM12
POLR2D
NFATC2
OAZ3
MRPL9
KATNB1
LMNA
PXK
MTF2
MLH1
EPM2AIP1
RPRD2
TSKU
SRFBP1
TGFBRAP1
C2orf49
PFDN4
DPP3
DGKZ
MELTF
PTPN6
C12orf57
BCO2
BCL9L
ZBTB11
RPL24
TNPO3
PTP4A1
AGAP11
ADIRF
NKD2
CXorf58
WWP2
USE1
C18orf63
PRSS27
PHRF1
SNRPD1
THUMPD3
ATN1
CARS1
HEXD
S100A2
MMP3
PRRC2B
STK40
FEM1A
SUB1
DR1
PAXBP1
GLIS2
EIF3B
TACC1
STOM
POC5
MDM4
VCAM1
UBC
PLIN3
PPP1R18
NRM
CWF19L1
ADK
RPGR
GPBP1
MFN2
NUDT13
RPL37
CARD6
RNF103-CHMP3
RMND5A
SQSTM1
COPS7A
TCF3
NOCT
ABR
TOP3A
SMCR8
SLC16A5
JUND
IQCN
THUMPD1
SRP9
KRT17
TTYH2
RPL38
SNRPG
PDF
NIP7
FAM136A
COG8
ATXN1
RNF7
CCNT1
PTPN14
ZNF620
TMEM129
TACC3
SLBP
ERCC2
RICTOR
NSFL1C
SPINT2
EPRS1
SH3GL1
CHAF1A
SPIN1
CDKN2AIP
MATN1
CCDC200
ANK3
PHF19
RCAN1
CEP126