ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2423836 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX3010277: A549

◢ SRX3010278: A549

◢ SRX150381: GM12878

◢ SRX3009984: GM12878

◢ SRX3009985: GM12878

◢ SRX2423904: HeLa

◢ SRX2423905: HeLa

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX824619: LNCAP

◢ SRX824620: LNCAP

◣ SRX2423836: MCF-7

◢ SRX2423837: MCF-7

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

SLC35E2A
POLG
PRKCI
IQCH
AAGAB
PTDSS1
MTERF3
SLC35E2B
CDIPT
POR
PDXDC1
EED
ZNF219
TMEM253
DUX4
SPATA17
GPATCH2
UTP18
MBTD1
CNOT6
GIT2
ANKRD13A
FBXO33
MYO9B
HAUS8
OGA
DNMT1
GNB2
SMIM41
ATG101
FAM53C
CDC25C
TADA3
ARPC4-TTLL3
ARPC4
TIGD5
EEF1D
PRKDC
MCM4
SRI
CMC2
CENPN
PFDN4
FUS
UROS
BCCIP
FLCN
EIF3B
TRAPPC6B
PNN
MOCS3
DPM1
OXR1
OLFML2A
NR6A1
BCL6
PARK7
MYL12A
PCNT
C21orf58
MRPS11
MRPL46
DNAAF3
TNNI3
UIMC1
LRPPRC
TMEM260
HDAC2
NOL8
CENPP
PPP5D1
CALM3
S100A13
S100A1
CHTOP
FRAT1
BZW2
ANKMY2
PAXIP1
PROX2
TCP11L2
INAVA
PABPC1
CDON
CD164
SELENOT
TAF15
PRR19
PAFAH1B3
NDUFB1
CPSF2
LSR
UQCRC2
TSKS
AP2A1
FRG2C
STK35
PKNOX1
ATP8A1
YY1AP1
DAP3
USP15
PRCC
DISP3
C6orf62
UFD1
CDC45
TARDBP
ZNF687
PPP1R13L
POLR1G
PSIP1
RMND5B
PIK3R3
GIPC1
TBC1D17
PNKP
AKT1S1
WASF2
PRMT1
DGAT2
PTCD3
POLR1A
ATF7-NPFF
ATF7
SELENOW
UBE2B
CDKL3
FKBP3
FANCM
PMVK
SMC3
C21orf91
MYL12B
SNAP29
PI4KA
ULK4
IFT52
TTF1
CFAP77
RPN2
MROH8
ZFAND3
AFF1
C11orf94
CFAP221
HHIPL1
CCDC85C
MTMR14
ALDH4A1
FZR1
DOHH
FAM156A
FRMD6
KCNAB2
NOCT
RHBDD3
EWSR1
NDST2
DDX42
CCDC47
SYN1
CFP
PRDX2
RNASEH2A
WRAP53
TP53
CDK16
AKIRIN1
UQCRH
LRRC41
PCBP2
TOX4
RAB2B
IQCE
BRAT1
UBALD1
MGRN1
TRIP10
GPR108
PHRF1
MAOA
ERCC6L2
CNOT10
MORF4L1
DPP9
FRAT2
CLTC
CENPE
SRCAP
LOC730183
UFSP2
C4orf47
GET3
NFYC
ARAF
RITA1
DDX54
RNFT1
PABPC4
GSTO2
COQ10B
MIA2
MAT2A
ENSA
ZNF335
UNK
H3-3B
PRPF40A
ARL6IP6
SRSF3
C6orf226
INTS2
MTRNR2L1
PIF1
KMT2E
BZW1
COMMD6
UCHL3
ATG16L2
CSNK2A1
DAZAP2
RNASEK
C17orf49
INO80D
UQCRQ
LEAP2
GDF9
FANCI
TRPM4
HRC
ASH1L
HDLBP
SEPTIN2
USP11
CSPP1
COPS5
FRG2
PRCP
DDIAS
CCT5
ATPSCKMT
POLG2
DDX5
LIN54
RNF103-CHMP3
RMND5A
ZBTB8OS
RBBP4
NQO2
WDR38
RPL35
ARPC5L
POLD1
NR1H2
TSPAN4
POLR2L
CD151
HYAL1
TUSC2
HYAL2
SLC35C2
RBM8A
PEX11B
FOS
RPL19
CACNB1
ESRRG
UBA1
SS18
SIRT4
TPD52L2
ABHD16B
MRPS18B
ETV2
COX6B1
UBE2A
CXorf56
GTF2A1
PTCD2
MRPS27
CSDE1
KAT7
SF3B4
MTMR11
SV2A
LSG1
PPIA
ATAT1
RAB28
BCLAF1
LARP4
FAM186A
SETD5
RAVER1
ICAM3
MED13
KMT5C
ANP32E
GNG14
DHPS
ATP6V0C
AMDHD2
TXN2
MTCH1
MAPK1IP1L
SERBP1
TRMT12
PPIB
MIA3
DHRS12
TCF25
LYRM1
DCUN1D3
EIF4A1
CD68
LOC100996842
MPDU1
SDR39U1
AZIN1
HSP90AB1
SLC35B2
PTOV1
HEXIM2
ART1
GRIPAP1
ZNFX1
SMG8
ARFGEF2
LOC102724770
DGCR6
LRCH4
FBXO24
EIF5
SASH1
TPBG
STAG2
MYL6B
MYL6
ZFP91
LPXN
SREK1IP1
CWC27
ZFP14
MNT
HAP1
KLF7
ZSCAN31
CDCA7L
KDELR1
GRIN2D
LY6G6F-LY6G6D
LY6G6F
ABHD16A
RPL22
RNF207
SRXN1
PTP4A2
DOT1L
UBAP2L
C1orf43
LANCL2
ZDHHC5
CLP1
FAM227A
CBY1
TRA2B
SRPK2
INAFM1
COPZ1
CYTH2
RPS11
RPL13A
APPBP2
BRD2
USP32
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
PRR3
GNL1
GART
TUFT1
H2BC21
H2AC21
H2AC20
H3C6
H2BC8
H2AC8
LIN7B
PPFIA3
C19orf73
DIAPH1
NFX1
CNOT4
SYVN1
PRRT1
PPT2
ASAH1
SMARCD2
LUC7L2
FMC1-LUC7L2
FMC1
PSMD6
TRIM37
KCTD2
ATP5PD
BCL7B
AMD1
SP4
HES1
EPC1
SLC3A2
MCL1
SRSF5
NAA50
ATP6V1A
TMEM129
TACC3
SLBP
ANKRD12
ZNF672
TRA2A
WDR6
SHC1
PYGO2
PBXIP1
LOC101928120
HNRNPH1
RAB11B
GSK3B
MED26
TINF2
GMPR2
ZBTB21
POLR2J3
TLK2
H1-2
H3C3
ARRDC3
CHMP3
PTPA
CRAT
FAM166A
STPG3
TUBB4B
NPC1
TMEM183A
RFX3
YTHDF3
PPP1R15A
PLEKHA4
RBBP6
GABPB2
PTGR2
MLLT11
ATF4
MADD
NR4A2
RALY
H4C6
H1-3
CBWD5
CBWD3
SIN3A
MEIS1
EIF4B
RCCD1
ZBTB4
SLC35G6
POLR2A
STX16
HNRNPC
SRSF6
TEDC1
CRIP1
BCAS3
UBC
MIB2
LSM12
G6PC3
SUMO2
RPL10
PHF8
TIMM17B
PQBP1
PPP4R3B
PRPF38A
ORC1
RDH5
ITGA7
BLOC1S1
JUND
IQCN
FAM43A
YWHAZ
KLF10
POLR1B
H4C12
H4C11
H2BC15
H2AC15
PRMT2
TMEM219
HMGN2
TUBD1
RPS6KB1
GALNT10
ZNHIT2
FAU
TM7SF2
TRAF7
RAB26
C8orf37
OTUB1
RBM3
CRIP2
NARF
CYBC1
BRIP1
SCAF1
RRAS
MORN2
DHX57
TBCC
BICRAL
COL23A1
FAM174C
CIRBP
H3C4
H4C5
H2BC7
H2AC7
PGP
BRICD5
MLST8
CASKIN1
RPL11
TMEM187
HCFC1
TNRC6B
TPTEP2-CSNK1E
PPP2R5C
CUL2
UPF1
DUSP3
CFAP97D1
DNAJC28
NBN
SRSF1
PPM1D
RSRP1
SLC38A2
HNRNPF
RPS12
MRPL35
IMMT
ILF3
TGM1
RABGGTA
CYB561
CDT1
APRT
SMARCAL1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RAB13
RPS27
H2BC4
H2AC6
PCIF1
H3C13
H2BC18
WDR37
IDI1
HEXIM1
ZCWPW1
PPP1R35
MEPCE
SDCBP2
KPNA2
ZZEF1
CYB5D2
TSSK4
MDP1
CHMP4A
SRSF7
CCNL1
PDCD6
PIP4K2B
DHX40
WASL
NCOA3
H4C2
H4C1
H3C1
H1-1
TMBIM6
CPE
TAF4
RNH1
EEF1A1
NME1-NME2
NME1
WBP11
C12orf60
LIN37
PSENEN
H2BC17
H2AC17
H3C12
VPS45
ID1
RPL8
ZNF517
ZNF34
NABP1
CAP1
PPIL3
NIF3L1
PSMD8
PRRT2
PAGR1
MAZ
ACBD5
MVP
PARD6B
ROBO1
LSM14A
RNF5
AGPAT1
AGER
YEATS4
DUSP1
PTPN1
ZC3H6
DBP
CA11
ZC3H10
RPL41
ANKRD17
TAF6
MBLAC1
CNPY4
NCAPD2
MRPL51
HNRNPA2B1
CBX3
PSMD14
NR4A1
NET1
HMBS
H2AX
DPAGT1
GRK6
CBWD2
TRIB1
SURF2
SURF1
RPL7A
MED22
PPP2R5B
ATG2A
ZNF524
FIZ1
ZNF865
UBE2M
CHMP2A
DDX59
TIMM50
RPLP1
ELK1
DNAJC27
TP53RK
SLC13A3
IRF3
BCL2L12
PSPC1
RBBP5
TOB1
GMNN
SF1
RMI1
HNRNPK
MTCH2
TRIM33
SERTAD3
HDAC1
H4C8
PBX2
GPSM3
OSGIN2
FTH1
EGR1
SLC25A6
PER2
IRF2BP2
MUS81
CFL1
MBNL1
MAML1
PCYOX1L
OARD1
NFYA
KEAP1
RPL26
KRBA2
CEP63
ANAPC13
PPP4R3A
H2AZ1
DNAJB14
NOL11
ALG13
MAP1LC3B
FBXO31
DIDO1
HNRNPL
CYP2W1
COX19
GID8
EIF2D
NUFIP2
RGS19
OPRL1
LKAAEAR1
NASP
RPL39
SDHAF2
CPSF7
WWTR1
PRKAR1A
TANK
CACYBP
VMP1
PTRH2
ZNF362
PPP1R14B
LOC114841035
FKBP2
SLC39A4
CPSF1
VEGFB
VCL
FOSB
RGL2
PFDN6
TXNIP
USP42
PRDM10
FBXW4
SPRYD4
ZNF254
CBWD6
SPAG7
RPL22L1
DDX6
GPN2
GPATCH3
MED25
FUZ
ELP5
CTDNEP1
TPX2
HSF1
BOP1
CLDN7
USP54
TRMT112
PRDX5
AP3S2
PPM1L
CHD2
EAPP
SLC43A2
SLC25A25
NAIF1
SCYL1
GET4
ZWILCH
RPL4
SNAPC5
FNBP4
FLNA
EMD
MORF4L2
SERP1
EIF2A
HNRNPAB
ELL
FOXJ2
ERN1
HECTD1
ARIH1
KDM6B
ACTR3C
ZBED6CL
LRRC61
PTMA
FAM227B
DTWD1
ZNF263
STK40
LDLR
SUMO3
TOP1
MARCHF9
CDK4
TSPAN31
AGAP2
MRPS24
SS18L1
PSMA7
CNOT3
SUPT16H
POGZ
H4C9
H2BC11
H2AC11
TSC22D1
SKP1
PSMC5
FTSJ3
PSMD3
PHF12
PWWP2A
SNX5
MGME1
TXNDC11
MARK2
MYC
ZNF248
USP9X
GTF2IRD2B
JUN
TYW1
SBDS
TAF7
PCDHGA1
LOC730098
CCL27
RPS26
EIF2AK3
ING5
TYW1B
VAMP2
MXD3
RAB24
PRELID1
STOML2
PIGO
TRIP11
SEC16A
C9orf163
CREM
WEE1
WDR4
H2BC12
H2AC12
PDIK1L
ZNF217
ZBTB37
RPSA
RPL10A
SMARCC1
AP1G1
TRIP4
PCLAF
ING3
ZAR1L
BRCA2
GNA13
H3-3A
TOMM6
PRICKLE4
FRS3
ATP5F1E
HIRIP3
PPP1R12B
UBE2T
BCAS4
DDX43
TST
MPST
ACTB
NOTCH2NLA
H2BC5
H1-4
SF3B2
GAL3ST3
SURF4
ZNF157
TPM4
SP3
FKBPL
ATF6B
SKA2
PRR11
VASN
SLC50A1
EFNA1
DPM3
PTP4A1
TMEM258
FEN1
RPAIN
NUP88
VAPB
PRUNE1
MINDY1
HMGB1
RNASE4
ANG
LMBRD1
EXD2
PGBD2
ATAD2B
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
STXBP3
BOLA2-SMG1P6
MPC2
DCAF6
TBX2
TTLL7
ADNP
PPWD1
CENPK
HIGD2B
BBS4
SOX15
ZMYND8
EIF1
KDM3B
AURKAIP1
DGLUCY
RPS6KA5
RBBP7
NR4A3
LATS1
PPP1R15B
ZNF706
FBXO46
SAPCD1
MAP3K2
VCPKMT
NEMF
TUBA1C
HNRNPUL1
MAPK6
GABARAP
GTPBP6
RPS3
SARAF
RAB3GAP1
PSMD5
HBP1
C14orf28
PPP2CA
SFPQ
SETD2
SRF
BRMS1L
CUL9
ADPGK
SOD2
FAM110A
TMEM238
TMEM190
RPL28
NACA
PAIP2
CALM1
EIF4A2
DDX3X
PTGER4
LEKR1
GRHL2
WBP1
INO80B
MOGS
QRICH1
JUNB
NME2
LRRC37A3
SPTAN1
ATP9A