ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424762 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◢ SRX11668227: K-562

◢ SRX11668228: K-562

◢ SRX186627: K-562

◢ SRX20731966: K-562

◢ SRX20731967: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ SRX3322072: K-562

◢ SRX3322073: K-562

◣ SRX2424762: MCF-7

◢ SRX2424763: MCF-7

◢ CUX1: STRING

MEIS1
PPP2R1A
ABR
TSHB
BNIP2
COX16
PLCD3
ACBD4
TUBD1
RPS6KB1
EIF2AK2
PPP1R3D
FAM217B
RGCC
BCAS1
SLC25A25
NAIF1
CUX1
SIRT4
PCDHB3
KDM8
VBP1
KIAA1217
PHACTR3
ESR1
SLC30A1
PARD6B
SNRPD2
QPCTL
NUDT15
LAPTM4B
SALL4
FRG2C
VCP
RPS29
FNBP4
ATMIN
PPP6R3
TMEM214
WDR74
CLK3
PAQR5
AASS
RPS11
COG3
CYP24A1
WDR12
CARF
DENND11
CNPY1
SNRNP35
VPS16
PCED1A
DUX4
H1-2
SULF2
RDH11
ZFHX2
THTPA
IRF2BP2
TMEM161A
WIPI1
NXNL2
TSEN54
CASKIN2
KPNA6
RANGRF
GSTA4
GMDS
FBXL18
TMEM107
CSTF1
AURKA
DHX37
BRI3BP
SNRNP70
SPAST
CNTRL
C5
SEMA4D
ZGRF1
LARP7
RIF1
UBE2D2
DIRAS1
MYLK4
CD36
ZHX2
GPD1L
GLDN
PALLD
GTF2F2
POGZ
GSTP1
AHCYL2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
TLE3
MTRNR2L1
MAP3K7CL
CCT8
OR1I1
PIGO
SLC25A24
RGMB
CD55
EXOSC5
BCKDHA
FREM2
MAF
RAB11B
PREP
FRG2
HEXIM2
ITPKC
COQ8B
SLC6A3
SCCPDH
BORCS6
OS9
BCL11B
EIF4E
ILF2
SEMA3E
FAM136A
MRPS23
DNAJC1
NTMT1
C9orf50
LIMK2
TBP
PSMB1
RPN2
MROH8
SRI
AKAP1
PFDN4
TSHZ3
COL23A1
TMEM237
CRADD
CAMTA1
TMED1
TENM1
PRR25
PIH1D1
ALDH16A1
YY1
UBA5
ACAD11
TESK2
DEDD
TMEM131
ZMYND8
DHRS4
INTS8
TMEM161B
CPVL
CHN2
FTCDNL1
KRTAP5-11
LSG1
TRIM55
STX16
B3GNT3
TRIM37
CELF2
BCAS4
NIP7
COG8
ZNF570
ZNF569
ADARB1
SND1
SLC7A8
RNF212B
KCNJ15
EXOSC2
SLC35A3
OR4D2
ADCY3
TMEM205
RAB3D
CCDC159
RNF222
HNRNPA3
PSMD6
MCTS1
NIPSNAP1
BCAS3
PSKH2
FNIP2
AP3S2
SAXO2
EFL1
MYO6
MVD
PIP5K1C
PRR13
SNW1
GTPBP6
ARPIN-AP3S2
ARPIN
ACTL6B
CCL3
CCL3L3
CCL3L1
MTFR1
NCOA3
UBE3D
DOP1A
BASP1
TMCO6
KLHDC8A
ASIC5
BFSP1
SMIM6
RNFT1
CXCL9
ART3
SKA2
PRR11
VAMP1
COPB2
MIOS
C17orf58
ANKRD33
IMMP2L
TMEM141
SLC26A7
ABHD2
ZFYVE26
RAD51B
TAF4
FAM160B1
SPINK1
PFN2
MTO1
ZNF700
CUX2
WBP1
INO80B
GREB1
CTNNBL1
HDGFL3
RBBP5
TMF1
SHMT2
RPS6KA5
DGLUCY
SPTSSB
AHCY
RGPD1
TTI2
HSFX4
USP32
ETFDH
C4orf46
RAPGEF1
IGSF5
SLC35A5
ATG3
H2BC15
H2AC15
BMP7
ZFAND3
RACGAP1
VIPR2
ZNF585B
PDE4DIP
ACBD7
SGPP1
ATP2C2
OPRL1
LKAAEAR1
ICE1
APBA2
AGTR1
LATS1
TTC39C
OAT
LRRC23
TMEM225B
MMD
POLG
EOLA1
HSFX3
ZNF410
TLE4
ALDH3B2
NOP58
TBL1X
TRIM7
QSOX1
GGCT
LMNB1
ID2
NAP1L1
VSIG10
TXN2
FOXN3
SH3BGR
ZNF367
SLC2A4RG
LIME1
ATF1
GPBP1
SLC12A3
IKBIP
APAF1
ZNF263
HNRNPH1
PPM1D
LUC7L2
FMC1-LUC7L2
FMC1
PPP6R1
APPBP2
IBTK
TUBB4B
ATP5MC1
SLC4A9
IFT46
RGPD2
TUBB6
CACNG1
AFTPH
PAK2
SMARCD2
POLR3GL
ANKRD34A
PLA2G2F
PGS1
CCND1
SFR1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TMEM211
PCDHA13
UBE2C
CRLS1
TRA2B
MARVELD3
PM20D2
PJA2
INTS5
AP2B1
PCM1
SPATA2
BTN3A2
DACT3
OR2W1
CRYGS
SNX20
SERPINI1
PDCD10
ARFGEF2
IL20
CAP2
CLN8
KBTBD6
ACSS3
FAM104A
C17orf80
BAIAP2
SLC2A3
TRIQK
ZFAND6
VPS26C
TXNRD1
RASEF
NCK2
SMYD3
SERPINA3
MAN2A1
TEX14
DCLRE1B
AP4B1
MKRN2OS
ATAD2
AARS2
KNL1
HES7
ALOXE3
UTS2B
CCDC50
MTMR11
BATF
SH3GL3
CHGA
ZBED9
COPS4
RCAN3
R3HDM2
INHBC
ACYP2
DHX40
IL18R1
BAHCC1
TAB3
PSME4
IQSEC1
HSPH1
KYNU
SIK2
VPS4A
TMCO3
DCUN1D2
CELSR3
KIAA1522
FAN1
TRIP4
ABCG2
CDK11A
BRIP1
CD276
MMAA
FDX2
GPR157
KRTAP3-1
POLR3G
MBLAC2
PSMB7
LPAR2
DIO3
MTFMT
NSUN6
ARL5B
PDCD6
ZBTB46
RPUSD3
POLR2D
CHD1L
PRKAB2
CEP78
PKM
HOMEZ
CRYAB
DIXDC1
HDAC8
SRSF1
LIMA1
JTB
GRN
CCDC30
C14orf119
ACIN1
ARNT
LENG1
GATB
SNX8
ADAMTS6
PSG9
MS4A8
NFIA
SAMD1
AKR1B15
THOC3
TBC1D31
ACTN4
LSM14A
DIAPH1
PATJ
EHD4
RERG
UBE2H
SPAG16
HIPK1
LRIG2
MTMR4
CLIP4
ZHX3
RIPOR3
RHOD
CCDC174
PIKFYVE
TXNDC16
CNIH1
GPR137C
TRIM69
TAF9
RAD17
AK6
ZNF623
GRB2
RNF34
AIP
SLC33A1
PDZRN3
NME1-NME2
NME1
PDIA4
FAM227B
DTWD1
ATXN7L3B
PRUNE1
MINDY1
INTS2
FST
SPATC1L
GTPBP4
ZNF507
GPR21
CSNK1A1
POC1B-GALNT4
GALNT4
UQCRB
TMEM183A
SSBP1
ATXN1
HIF1A
FOXD3
SHF
FTSJ1
HOXB8
HOXB7
VAV3
ARHGEF6
RNASE4
ANG
ZMYM2
TMEM125
INSM2
ASMTL
CX3CL1
YWHAB
PRKCI
PNP
KLHDC4
KCNJ8
GABPB2
PRSS41
WBP1L
S100P
BRINP3
CPLX2
RAD51C
HPS1
DHX8
NOL11
TMEM69
MKS1
GPBP1L1
RAB5B
HNRNPH2
TPD52
OTX1
RNF43
GRWD1
RGL1
ARPC5
GOLT1A
AADAC
PCBP2
MXRA8
EPX
CSTF2T
GNAI3
C2CD5
ETFA
ZNF385A
TMPRSS11F
WDPCP
AP3M2
MDH1
COMMD2
DCP1B
BCAS2
CEBPG
OPA1
HSH2D
LIMS1
BAX
PMPCB
ITSN2
ZNF398
LSM14B
GARRE1
PRRG2
NOSIP
CSDE1
CLIP1
GNB2
SPAAR
HMGN1
ATF7IP
ZNF213
SVIL
DARS1
MIEF2
FLII
TOX4
RAB2B
TBX4
JPT1
SLC38A2
EPB41L2
SUPT7L
SLC4A1AP
ARMCX5-GPRASP2
ARMCX5
DENND4A
ID1
ERCC2
IPPK
EIF3C
EPO
SNRPB2
FBXO7
EIF2D
SLC22A17
MON1B
MPP7
EXPH5
USP2
DYNC2H1
ADAM17
C8orf37
RBMXL1
OR13C2
KYAT3
C6orf89
SGK3
IMP4
CCDC115
PPIL1
RPL35A
IQCG
CLTC
ATP7B
AP1M2
ALG11
AKIRIN2
GATA3
CEBPE
PHTF1
E2F8
H3C8
H2BC10
HSPA1L
HSPA1A
ATG9B
ABCB8
HBP1
PSME3
KLHL12
SEPHS2
TPCN1
STMN3
RTEL1
CEACAM7
C16orf54
ABCD4
TSPYL4
DSE
RMND1
ARMT1
SPRED2
POLR3E
NHP2
SETDB1
EPHA7
OAZ2
USPL1
REN
ME1
HMGB1
DOCK2
STX1A
PAXBP1
RSRC1
SHOX2
TUT1
IST1
FAM169B
CCNY
C5orf60
YJU2
LRRC37A3
WDR38
LEO1
KLRC2
DSTYK
PRC1
CRYAA2
CRYAA
RTF2
LDLR
POLR2J3
TPR
ODR4
FOXI3
SPATA9
RHOBTB3
GOLPH3L
RTN4
MAX
NUP85
KCTD3
TPM4
OXSM
NGLY1
TM2D1
CLUAP1
C16orf90
RPL24
PABPN1
TBX3
DMRT2
GET4
UQCRHL
EGR2
TANGO6
PSMC5
FTSJ3
SPO11
TMEM139
CASP2
DSN1
FZR1
GPR160
ENSA
BCL2L1
BSDC1
TROAP
MKRN2
MINK1
SNX12
SRGAP2C
FAM72B
SLC25A23
CRB3
ZNF713
PRODH
LOC102724788
ABHD4
GDPD4
SMIM10L2B
ANXA7
MAPRE2
MEIKIN
GMEB2
ZP3
YWHAZ
TMPRSS7
CCNL1
HSPA5
CLDN4
PRKAG2
ECHDC1
SLC25A29
ZNF337
WDR89
TECR
DNAJB1
TOMM40L
APOA2
UROS
RBM8A
BCCIP
ZNF687
MTBP
MRPL13
EDEM2
PPP1R42
ZNF750
UTP23
GRHL2
DDX41
SPAG1
ATXN7
THEM4
STOM
EIF3E
WASHC5
SNX11
NSMCE2
TRIM33
FKBP3
FANCM
NPW
PEX7
SLC7A2
RPL23A
RAB34
LOC100287896
LIPT2
NUP153
ADA2
CSGALNACT1
SP2
SLC26A2
PDXDC1
HMCES
NGDN
SERPIND1
SEPTIN9
KYAT1
BAZ1A
ZNF335
GOT1
TMEM94
EPHB3
DPP8
PALB2
DCTN5
WWOX
SETDB2
CAB39L
ZER1
ADPGK
NTNG1
ZNF487
SHC3
SEMA3C
DENND2C
PRKCSH
CCDC151
DEPTOR
PIGBOS1
PIGB
SIDT1
PDAP1
BUD31
GTF2IRD2B
GTF2H4
ZNF3
SNX1
CIAO2A
VPS37C
RHD
SLX1B
SLX1A
BOLA2B
BOLA2
KIFBP
RNF216
GDAP1
OGDH
SLC12A4
RGPD8
RGPD5
AGR2
RGPD6
VTA1
NMBR
NOP53
GOLGA7B
SLC35E2A
ITPRID1
SMG8
CALHM4
KRR1
H3C13
H2BC18
ZNRF1
RAB30
ADGRF4
CCDC59
NTAQ1
ABT1
COG7
ATP5MC2
ZNF181
ZSCAN32
ZNF174
SLC25A19
LARS1
DTNA
STAP2
MPND
CYP20A1
YPEL2
TMEM71
PHF20L1
DLG2
NOTCH2NLC
TMEM126B
ABCA5
ZNF354A
TRMT5
SLC38A6
DAD1
RPL22
MAFA
H3C6
TRPM7
RABGGTB
LPIN3
TANC2
SENP2
MAPK1IP1L
FANCA
ZFP91
LPXN
ZBTB20
KHDC4
OTUD6B
ADAM8
RBBP6
ARRDC4
URB1
PDCL3
NRAS
RBM25
RAB6A
FAM161B
COQ6
ATG101
MICALL2
MDM4
CBWD5
CBWD3
ANKHD1-EIF4EBP3
ANKHD1
CBWD6
PTDSS1
MTERF3
C3orf49
PCIF1
U2SURP
USP17L22
USP17L20
RPL22L1
RAB24
PRELID1
NIPAL2
MAP1LC3B
FBXO31
PC
DZIP3
CIP2A
HDAC2
RNF7
SLC35B1
PRKAR1A
GPRC5A
FAM168A
KAT5
SMARCA4
SLC9A6
SAMD10
PRPF6
ITGB4
CSE1L
PUS10
PEX13
UBQLN1
HNRNPR
BOLA2-SMG1P6
DCTN1
OTUD7B
C3orf14
C16orf95
USP6NL
MRPS18C
HELQ
TMTC2
THAP10
PPP4R3A
LRRC49
AP5S1
CPEB4
STPG2
PTPN1
STRADA
CDS1
ZC3H6
ZNF668
FBXW11
ZNF646
UXS1
TSGA10
SPG7
NUDCD1
C7orf50
C2orf15
PBLD
HNRNPH3
AHCYL1
AP4E1
MAP2K1
TBC1D32
CDK5RAP3
SLC25A36
MOCS3
DPM1
CDK20
ARL6IP1
BMS1
FAM111A
SCNM1
LYSMD1