ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3322073 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◢ SRX11668227: K-562

◢ SRX11668228: K-562

◢ SRX186627: K-562

◢ SRX20731966: K-562

◢ SRX20731967: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ SRX3322072: K-562

◣ SRX3322073: K-562

◢ SRX2424762: MCF-7

◢ SRX2424763: MCF-7

◢ CUX1: STRING

ZNF595
BNIP2
MTRNR2L2
MSH3
DHFR
P4HB
STAP2
MPND
MTRNR2L8
UBE3C
FZD5
SPATA9
RHOBTB3
NDUFAB1
TANGO2
SLC30A1
PGP
BRICD5
PPP2R1A
ARID4A
DOLPP1
CUX1
ABR
ZBTB8OS
RBBP4
RGPD1
RGPD2
OPLAH
MEIS1
USHBP1
BABAM1
CALCOCO2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
DIRAS1
ARNTL
CNOT1
SLC6A9
ZBTB14
NPAS4
TTI2
SUMO2
AXDND1
SUMO3
UAP1L1
SAPCD2
MTRNR2L1
MTRNR2L9
PLAAT4
ZSCAN31
ZKSCAN3
PLCD3
ACBD4
ZNF367
PLEKHF2
SNRNP35
SLC4A1
BLOC1S6
MAP3K20
OXSM
NGLY1
ADGRB3
SIRT4
DAGLB
BCL7B
SMCO1
MPV17L2
NUDT15
PGLYRP4
CDK19
AMD1
TMEM214
VBP1
LZTR1
TRMT12
TMEM120A
MYCL
IL1R1
SACM1L
CTNNBL1
PAQR5
HTR5A
MOB1B
PTPRF
UCP3
FGGY
AKR1E2
VPS29
RAD9B
PYCR2
DNAJB2
ALG6
RINL
ANKS6
CXXC1
C17orf58
UCKL1
DGCR8
HIKESHI
CFLAR
C3orf86
NADK2
CYB5R4
NFE2
KDM7A
OR1I1
TSHB
RBBP5
CLN8
RALGDS
FEM1A
AGPAT1
DHX40
RNF130
KPNB1
SMARCA4
SLC45A3
FCHSD2
UTP11
TEDC1
CRIP1
NRCAM
SH3GL1
CHAF1A
ZGRF1
LARP7
TMEM164
OARD1
NFYA
MST1
STAU2
UBALD2
DENND11
TDRKH
SEPTIN5
GP1BB
GRHL1
PRKAB1
TMEM139
CASP2
FAM136A
EPB41
STRIP1
NSD1
RIN3
LUC7L2
FMC1-LUC7L2
FMC1
CAMTA1
RABGAP1L
SPG11
SAFB2
SAFB
C1orf174
RPP25
USF2
CCDC88A
LEMD2
PPP6R3
NAGLU
SKIL
PANK4
HES5
AP1M1
SLC22A24
LEP
TM2D2
ADAM9
MFAP3L
DAZAP1
CCDC88B
SLC25A25
NAIF1
BCL10
UBE2D2
ABCB10
CDC14A
MEF2C
CTBP1
POLM
VIPR2
NPEPPS
CANT1
YPEL4
NUP214
KHSRP
CCDC116
TDP2
ACOT13
SERPIND1
FBXO46
CXCL2
IFRD2
PTP4A3
CLK3
TCERG1
PHF19
MED15
SLC29A1
BOD1
USP31
KPNA6
MAN2A2
TOP3B
CABIN1
WWP1
TMEM141
ZBED1
DHRSX
UNK
RGCC
LIN28A
SRGAP2
FAM72A
TSHZ3
OTUD7A
AMMECR1
TSPAN32
C11orf21
PCNT
C21orf58
BNIP3L
LGALS9
H4C9
H2BC11
H2AC11
DDX23
BLOC1S4
VPS16
PCED1A
FRG2
C12orf43
SKA2
PRR11
GTF2I
SLC30A2
BTNL10
CLUL1
PRAME
HM13
AP3M2
VDAC2
CFB
ZNF131
TCTEX1D4
BTBD19
SKIV2L
NELFE
RUFY1
C1orf159
NFIB
MXD1
IGF1R
BANP
SLC30A5
UFD1
CDC45
PHF21A
SFT2D2
BAGE4
BAGE3
BAGE
MUS81
CFL1
TAL1
TRIM35
PTK2B
SRSF4
WDR74
DIP2A
NAPEPLD
AHCTF1
AP2A2
CALCOCO1
CARD8
ADCYAP1
MTRNR2L10
ABCA3
ADK
TMEM161B
LASP1
SRSF6
ZFP91
LPXN
PPP5D1
CALM3
ATP5F1E
GRIN2D
RHNO1
FOXM1
UBE2E3
UBALD1
THAP7
LRRC61
AARS2
DNAJC11
CCAR1
DUX4
NFIA
FRG2C
RTN4
EIF4E
MTO1
KIAA1217
IL13
RIPOR3
PRR5
ARID3B
NOSTRIN
MRPS15
KLF3
IQSEC3
CLPX
BSG
SNRNP70
EIF2D
IFI6
NCOA5
PIP5K1C
CRKL
NUDT19
CHD1L
PRKAB2
ATXN7L2
ILF3
C1orf105
TMCC2
ZFAND3
FAH
TRMT2A
RANBP1
NDUFA4
WSB1
FASN
SCAMP5
DNAJC1
FDPS
EIF4H
APOC1
CELF3
IFT140
CRAMP1
SHLD2
GLUD1
GTF3C6
YPEL1
RTL10
GNB1L
H1-2
SCYL3
SH3BP5L
CCDC174
PI16
TMEM107
EPC1
SUPV3L1
BSPRY
STK11
PRR25
MACC1
GUCA1B
AKIRIN2
MIER1
HEXIM2
ILF2
RPL36
C1orf74
TOLLIP
CFAP206
H2BC15
H2AC15
SUSD1
ZNF451
LATS1
HSPA1L
HSPA1A
IFITM3
SRRT
SPAST
ZNF628
CMTM3
RPA2
TMED1
PEX14
DFFA
KDM5B
XKR7
PTBP1
SLC4A2
NSD2
CDK5
MARCHF2
HSF5
ZFHX2
THTPA
SULT2B1
PAFAH2
CNPY3
IBA57
TBL1X
PPP3R1
PXN
TRIM63
COG3
SHC2
SNX12
TRPC4AP
CCDC124
GALNT1
TUT1
TPGS1
HPCA
SDE2
COX16
FRMD4A
ABCF3
REPIN1
KLHL21
DYNC2I2
YPEL3
TBX6
MINDY2
VWA5A
VWA7
ZNF341
RPS8
ZG16
ING3
PDK1
DEDD
SNAP29
PI4KA
UBE2E2
IKBKB
H4C11
ST3GAL2
GINS3
UBAP2
TCEA2
CDK5RAP2
BTRC
SPTBN4
BLVRB
AMN1
CLSTN1
IL17RE
DLGAP3
LCOR
CCDC126
OR8G2P
SMURF1
ZNF484
HERC1
AURKAIP1
BTN3A2
HSPA9
ERMN
NFYC
PRCC
PPOX
TES
THEM5
TUFT1
RAD23A
HP1BP3
SHLD1
SLITRK5
NELFA
MALSU1
MTHFR
CS
CYP21A2
SAMD9L
TMCO6
HES7
ALOXE3
TOMM40
TRUB2
COQ4
GAB2
MRPL27
EME1
LSM10
GSK3B
CXCL6
ZBED9
SMIM12
DLGAP4
PRR14
ARHGDIA
NRDC
ST7
PIGO
HDAC6
CXXC5
RRP1B
HSF2BP
ZNF335
FOXRED2
RBKS
BABAM2
ST6GAL1
KNL1
ACBD5
RAP1GAP
AP2S1
DBNDD1
GAS8
TMPRSS11F
CCDC137
TIMM21
FBXO15
TCP11L2
ADNP
SEC24C
PDE4A
ATL3
FBXL19
SRSF10
UTS2B
CCDC50
HDAC8
PPP1R12C
SUZ12
RNF217
CCRL2
TEPP
C1orf100
SLC17A7
UPF1
FYCO1
COL23A1
MAZ
KLK2
PXT1
KCTD20
USP1
TARBP1
HAP1
RFC1
PPARD
SPAG17
RANGRF
GTPBP6
FDX2
RPIA
LARP4B
BIRC5
RFFL
MAPK1
UBE2H
RAB30
PPIL2
DNA2
SNF8
PCBP1
GTF2H4
PPFIA4
RTBDN
DRC7
PHC2
PREPL
CAMKMT
BAG6
APOM
EIF3B
NUP205
GFUS
PPM1F
MGAT5
MRPL40
HIRA
SRGAP2C
FAM72B
TPRKB
HMBS
NOS3
AGPAT3
GBA
KRI1
CDKN2D
TOR1A
FAM72C
PHACTR3
SAMD1
SRGAP2B
FAM72D
CSTF3
TSSC4
RAB3GAP2
APBB1
TTC26
INTS9
HMBOX1
TMEM242
TBC1D17
AKT1S1
HNRNPA3
ADSS1
ZNF649
ZFYVE1
AGPS
WBP1
INO80B
METTL26
RYK
AHCYL2
CITED4
PSMD3
OGT
RNF220
TOR1AIP2
TOR1AIP1
KAT5
RANGAP1
HACD2
ATP2B1
OR52A1
SLC34A1
DNM1L
DMAP1
MEIOSIN
GNL3L
AKR1A1
R3HDM2
INHBC
IL1RN
FLYWCH1
TLE2
SCRT2
PCM1
WTAP
SOD2
MGA
NBEAL2
ATP5MF-PTCD1
ATP5MF
GAREM2
MTOR
TSNAXIP1
RANBP10
MVD
TXLNA
IPO13
PRRG2
NOSIP
TM9SF4
GAR1
GSPT1
CHD2
MPDU1
LOC100996842
XRCC4
TMEM167A
ZNF821
COPS6
CD68
AKT2
VCPIP1
SLC35E2A
C8orf44-SGK3
VCP
TIPRL
NADK
PSPN
ALKBH7
TYK2
SUMF2
BRWD1
CHMP4B
UBXN2A
STK19
HSP90B1
DXO
LRIG2
ADSS2
CYREN
GPATCH8
EVI5
SSBP1
H1-0
GCAT
PCIF1
FAM210B
STX1A
PAXBP1
ATP5MC1
CENPS-CORT
CENPS
UTP3
SMARCB1
ATXN1L
SEC22C
SS18L2
DNAJB12
FAM98B
KLHDC8B
ZNF444
KIF15
KIAA1143
CCDC71
TFPT
PRPF31
SLC25A6
LDHA
RDH11
RNF187
TRIM23
TRAPPC13
SHLD3
RPS12
RIOK2
EXOSC5
BCKDHA
GPANK1
CSNK2B
CHFR
C6orf47
GP6
ERCC6L2
DYNC2H1
KANSL3
FER1L5
MED18
ZNF503
UBAC1
UBE2L3
ZNF263
SCAMP4
ADAT3
MRPL24
VARS1
E2F6
PPP1R37
DDX17
ZNF787
CUL9
P2RX6
IWS1
FNBP4
SLC25A45
FRMD8
ZCCHC7
RPP40
SEH1L
KLHL20
CDK11A
PSMC3IP
HMGCS1
METTL2B
FANCC
VILL
TRIM67
ZNF77
RFX1
LYL1
FOXN1
SSH1
MFSD2B
SPATA46
AQP1
TFR2
BCAS1
GYPB
CA1
FKBPL
ATF6B
SLFN14
HMX3
PPP1R14D
MAD2L1BP
GTPBP2
BIRC2
GYPE
ANK1
PLCL2
ZMYND8
GYPA
KIAA1586
FAM83A
UBE2F
SCMH1
FKBP8
CD2
CMIP
TMEM9
NPL
ATG4D
PPP1R15A
CFAP410
PLEKHA4
GATA1
FAM214B
GADD45G
CHCHD2
TUBB1
NARF
ARRDC2
DENR
C1orf226
THEMIS2
RUNX1T1
HTR4
LAPTM4B
IL1RL1
S100Z
DDC
EIF2AK1
ZNF347
ARL4D
ZNF79
TMBIM1
PTAFR
KCNH2
FECH
SLC38A8
RMND5B
CASS4
CTPS1
SLC14A1
SEPTIN9
SLC43A3
KSR1
DCP1A
SPRR2A
SLC25A42
PISD
HPCAL1
YJU2
MFSD12
ASIC4
LYNX1-SLURP2
LYNX1
HDAC11
LIPC
ALOX12
TNFAIP8
YIF1B
KCNK6
SPINK4
PRDM11
CD300LF
TMOD1
BCR
DNMT3A
ERMAP
HDC
RAD51AP2
CD59
CCM2
PLSCR2
BSDC1
SLC2A1
UROD
HECTD3
ADAR
MAP1LC3B2
SYPL1
SMIM1
GCNT1
HEMGN
C2orf88
TBPL1
ESYT1
KRTAP10-6
POLD4
CAB39
KEL
MEST
FOXO3
STK17A
TMPPE
GLB1
NPAT
ATM
CDK12
PSMD5
LRRC37A3
ATP6V1F
E2F1
HLTF
ALAS2
PTMS
GRAP2
KDM8
ELMO1
DOCK9
ESPN
FLVCR1
FSD2
LNPEP
TMEM72
RHOT1
ELF3
RPP21
GUK1
GJC2
GPX1
TMEM114
THAP6
STBD1
TFRC
PRKAR1B
CERS2
ANXA9
RAB21
TLE3
SPI1
TBX19
WRN
PURG
IRF2BP2
ZFPM1
ID2
CORO1C
SCRT1
CNKSR3
EZH1
FBXO9
QRICH1
CYP26A1
IL18BP
IGSF8
ECHDC3
CARHSP1
VPS9D1
ST6GALNAC1
SPN
CCDC91
ARF3
ZNF696
DDIT4
USP9X
PLS1
KLF1
GCDH
DNASE2
LBR
RPS11
TPM4
TXN2
SLC4A5
AQP8
SAMD4A
BCL3
SIK2
MFN2
MYO1C
ARF4
MAP3K8
DPEP3
RABEP2
CPQ
DDX42
CCDC47
ZFPM2
ARCN1
MAP2K2
GALNT5
TTLL12
CNR1
BTG2
CR1L
KMT5A
CAT
RP1L1
FAM110A
MGAT3
TUBGCP5
MTFR1
PIGV
TNFAIP3
VMP1
PTRH2
TIGAR
TBC1D24
LPAR5
RAP1A
ZNF331
EGFL7
SRPK3
SLC25A37
RGS20
SLC4A8
GALNT6
CDH23
SLC3A2
ZNRD2
FAM89B
EHBP1L1
ANKRD33
RAB42
PRDX1
CD58
DHH
TENT5D
NPRL3
RAB3IL1
STMP1