ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424763 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◢ SRX11668227: K-562

◢ SRX11668228: K-562

◢ SRX186627: K-562

◢ SRX20731966: K-562

◢ SRX20731967: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ SRX3322072: K-562

◢ SRX3322073: K-562

◢ SRX2424762: MCF-7

◣ SRX2424763: MCF-7

◢ CUX1: STRING

FAM9A
DEFA5
MEIS1
DUX4
ABR
TUBD1
RPS6KB1
COX16
BCAS1
ACP6
RGCC
EIF2AK2
NUDT15
RPS29
TMEM214
SYCP2
PPP1R3D
FAM217B
SIRT4
SLC25A25
NAIF1
PAQR5
ESR1
SALL4
RAB11B
ERICH6B
PARD6B
IGFBP2
FAM102B
PMEPA1
BNIP2
PPP2R1A
HJV
SNRNP35
MLLT3
CRLF2
ZFHX2
THTPA
ZGRF1
LARP7
FRG2C
CYP24A1
DHX40
UBA5
ACAD11
ATMIN
NEDD9
PLCD3
ACBD4
CNPY1
KDM8
SEMA3E
GREB1
SPAST
NANOG
IRF2BP2
PNPO
SLC11A2
KYAT1
PARP11
FBXL18
SLC25A35
RANGRF
FBXW8
GSTA4
LAPTM4B
NXNL2
ART1
FREM2
PDE6A
PCDHB3
PCDHB2
WIPI1
CNTRL
C5
IBTK
ITGA4
LDLR
ABL1
POGZ
VCP
FANCG
H3C3
H1-2
AHCYL2
FAM240C
SULF2
BFSP1
RDH12
RDH11
IGSF5
DICER1
EZH2
GMDS
TAF13
BCAS4
SACM1L
HOMER2
ARHGAP12
ANKRD33
SND1
CXCL9
ART3
PPP6R3
UBE2V1
DHX37
BRI3BP
QSOX1
OR8G2P
ZHX2
FAM160B1
DEDD
WDR12
CARF
COG3
CYP3A7-CYP3A51P
CYP3A7
CDK3
RNF19A
ANKHD1-EIF4EBP3
ANKHD1
DNAJC1
ID1
RPS3
PREP
OSER1
C7orf50
PJA2
CCK
VPS16
PCED1A
BMP7
HCLS1
STK3
MAF
EVL
B3GNT3
LY6G6F-LY6G6D
LY6G6F
ABHD16A
SLC38A1
NECTIN4
FRG2
HSPH1
CLK3
GNB5
CDH18
KPNA6
FNBP4
ARPIN-AP3S2
ARPIN
TBP
PSMB1
NTMT1
C9orf50
OR4F6
OR4F15
PALLD
MBTPS1
SNRNP70
MTO1
CGAS
WBP1
INO80B
RAP1GAP
ZMYND8
EIF4E
SLC35A3
TTC39C
TEX2
CD55
TMEM161B
IKBIP
APAF1
GLDN
PLSCR2
PLEKHM3
SRI
FAM102A
CCL22
CX3CL1
CYB561
HES7
ALOXE3
SNRPD2
QPCTL
PRKAB1
AASS
ARNT
MYO6
ZFAND3
SLC7A8
PTPRH
VSIG10
ATP6V0D2
STOML2
PIGO
RPN2
MROH8
BCL11B
SESTD1
MEIKIN
PFDN4
TSHB
NAP1L1
CCND1
PFKP
ONECUT1
AP3S2
ABCB5
STRIP2
NT5C2
PUS10
PEX13
R3HDM2
INHBC
NIPSNAP1
MAST2
VBP1
RAP1A
WDR74
STX5
PHACTR3
GRAMD1A
ZBTB46
SCN2A
ITPKC
COQ8B
CAND1
ARRB1
WEE2
DENND11
AP2B1
PEX12
ACSS3
TMEM237
TRA2B
CD36
SLC25A24
VAV3
ZNF77
TMEM141
CCDC183
TET3
ATXN1
CTBP1
DLG5
MTMR11
GDPD4
SPAG16
AKAP1
SGPP1
IQSEC2
GSTP1
ADAM17
TMSB4X
TM4SF19
VPS4A
NCOA3
LSG1
SNRPG
FAM136A
DUSP1
TXNRD1
NTNG1
SPINK1
ALDH3B2
ZFP91
LPXN
PIK3CA
MAP3K3
SHMT2
TRIM55
KALRN
KRT19
ATP2C2
TMEM107
FOXF1
FOXJ3
NOTCH2NLB
NPR1
ILF2
UBE2D2
PRC1
NEBL
LIMK2
ZNF263
SH3BGR
NOTCH2NLA
ADAMTS6
POMZP3
CELA2A
GPR157
FOXN3
RTEL1
STMN3
VPS33B
TMEM161A
COPB2
PLD1
ACTL6B
GATA3
LSM14B
MAN2A1
TMEM131
ZNF570
ZNF569
TTI2
SUSD6
PLA2G3
INPP5J
CLIP4
H4C12
H2BC15
H2AC15
SLC38A5
FTSJ1
HDAC8
GTPBP4
PFN2
KRTAP5-11
RBBP5
PPP1R12B
HABP2
DMRTC1B
DMRTC1
GPD1L
ZNF185
RBAK-RBAKDN
RBAK
NOTCH1
BCAS3
SLC48A1
EXOSC5
BCKDHA
RAPGEF3
GFPT1
AIP
PYGL
ADARB1
LUC7L2
FMC1-LUC7L2
FMC1
C2CD4A
ACBD6
SNX8
MAX
PM20D2
ABCC2
GUK1
TJP3
PIP5K1C
MAP3K7CL
CCT8
MBD3L1
KYNU
PTP4A2
IFRD1
BICRA
MTFMT
MRPL48
STPG2
NRBP1
ZFYVE26
RAD51B
GRB2
LPAR2
PBX4
ADAMTS1
TLCD3B
KHDRBS3
CNIH1
CRABP1
GLIPR1L2
MIEF2
FLII
SNAI1
MYO5C
ZNF367
FAM3B
MINDY4B
FTCDNL1
GTPBP6
AKR1B15
NEMF
AEBP2
GCM2
AKR1E2
DOK5
BMERB1
GGCT
KRT39
ETV7
RGPD1
RGPD2
PHLPP2
GMNN
GP5
MARCHF10
POLR2D
CAV3
KIFC1
FTCD-AS1
PDE4DIP
ACYP2
ZHX3
EIF3C
MVD
C17orf58
ASB8
NEPRO
ZNF398
RNF212B
SAMD1
C19orf67
CDK1
KLRF2
STX16
METTL21A
SREBF2
RAD23B
KIAA1217
ATXN7L3B
NDUFB6
ESX1
HSFX4
KLHDC8A
METTL27
EOLA2
CLDN4
SF3B3
COG4
ZNF623
KIF3C
LARP1B
SERPINA12
ADCY3
ZNF704
PTP4A1
SLC13A1
ARL13B
ACBD7
RNF34
MID1
HSFX3
EOLA1
REN
FBXO7
TSEN54
LLGL2
CASKIN2
MTMR3
MDM2
SLC35A5
ATG3
SYDE2
POSTN
ULBP1
PSME4
SLC22A17
SERPINA3
ABCC5
TMEM241
SLC2A4RG
LIME1
TBX2
ZNF410
RIOK3
MXD3
POLR3E
ECHDC1
RPS11
RPL13A
CD14
TMCO6
NDUFA2
IK
IL23R
SULT2B1
MIOS
VPS26C
DHRS4
TXNDC16
GPR137C
SLC9A6
TBX4
TMCO3
DCUN1D2
ITPRID1
GTF2F2
FNIP2
SERTAD2
ZC3H3
AARS2
SLC2A5
AGR2
ARHGAP32
TENM1
TRIQK
SLAIN2
C3orf20
UBE2H
CLIP1
RHOB
MYC
JPT1
TBL1X
CCDC200
NHSL1
CSTF1
AURKA
SIGLEC11
RP1L1
GPR61
GNAI3
LATS1
TRMO
GRIA2
CLK4
APOL4
PRR25
GNG13
BZW2
LRIG2
SLC25A29
TXN2
SHF
SMIM6
GRAMD2B
SLC26A7
RAB8B
RAB13
SLC39A1
JTB
CREB3L4
AQP11
RIF1
NTRK1
INSRR
ARID5B
CHD1L
RNF114
RASEF
MTRES1
USP32
FKBP1A
GPRC5A
RERG
BBX
ATG9B
ABCB8
ZNRF1
OS9
CHD2
MGAT3
AFTPH
MIEF1
MPZL1
VGLL3
DAPK1
RABGAP1L
BCL10
TCAF2
FAAP24
CEP89
ACSS1
PSMG3
TPD52
MINK1
SYCE1L
MON1B
VKORC1L1
NOTCH2NLC
OSBPL8
SLC30A1
EHD4
TRIM37
PRKAG2
DEFB131A
CCL15
ARHGEF6
OR2F1
PHLDA3
UNK
H3-3B
NRDE2
ITPR1
ATP1A2
SPRED2
SLC4A9
NBPF19
MRPS10
RGS3
SCCPDH
ZBTB7B
LENEP
CUX1
TMEM30B
HEATR4
ACOT2
KRTAP3-2
KRTAP3-1
DIRAS1
SLC12A3
INTS8
FAXDC2
TESK2
MMACHC
CCDC163
DZIP3
CIP2A
SYCP2L
GPR65
SMIM10L1
PRH1-TAS2R14
MCTS1
TAS2R42
PSMD6
BORCS6
ZNF212
PLA2G2F
FBXO11
ANXA2
ZNF598
NPW
CCDC83
EMP3
DYNC1H1
KIF5C
IKZF4
LYPD3
TMPRSS11F
ACOX3
POLG
EPHA7
NTAN1
KRT7
BASP1
MPP7
MRPS33
SLC39A9
ERH
FHL2
MMP13
ADCY5
CBWD5
MFSD2B
TMEM225B
SMYD3
CLDN9
CLDN6
CAST
WEE1
CALHM4
ZNF507
PROSER2
DLX2
STRN3
AP4S1
POLR3GL
LIX1L
ANKRD34A
KLK13
PRRG4
MRPL1
EREG
CALCR
COP1
TET2
CCL3
CCL3L3
CCL3L1
S100A16
S100A14
MS4A7
HDC
TBC1D30
ARHGAP35
E2F8
AZIN1
CREG2
MB21D2
SH3BGRL
HMGN5
ARFGEF2
DEPTOR
MANSC4
KLHL42
C8orf37
LPIN3
ZNF710
PKD2L2
YBEY
MCM3AP
SVIL
PSG9
FAM153B
ZNF662
LYPD6B
UXS1
PPP1R15B
FAM227B
DTWD1
VEGFC
VPS45
SPATA2
DCLRE1B
AP4B1
CSDE1
ZNF335
CGRRF1
LIN37
PROSER3
HSPB6
SYT16
SKA2
PRR11
RANBP6
CLTC
MTRNR2L2
MSH3
DHFR
DAGLB
MTRNR2L8
IL13
CXXC5
BCL7B
PTPRF
IL1R1
MOB1B
TSHZ2
ZNF852
VILL
SLC6A9
MARCHF2
SLC4A1
OAZ2
DNAJB2
EMILIN2
NFE2
SLC25A17
BNIP3L
RFX1
NRTN
DUS3L
PDZK1IP1
OAZ1
JSRP1
RPP25
USP21
PPOX
ERMN
AGPAT1
SULT2A1
RHD
TRIM67
RELN
RIPOR3
MAN2A2
BTNL10
LYL1
TAL1
FOXN1
NOS1AP
SSH1
COL18A1
SERPIND1
LEPROT
LEPR
FCGR1A
TANGO2
ARVCF
MACC1
CEBPE
SPATA46
C1orf226
AQP1
OR10V1
C3orf86
ST6GAL1
LMLN2
TMEM120A
BSG
MAGEA11
YPEL4
CLP1
PGLYRP4
GPR182
RHCE
NFIB
TFR2
BTG2
GYPB
CA1
PYCR2
SIGLEC12
HERC1
RNF10
HNRNPF
AVPR2
FKBPL
ATF6B
RINL
C1orf116
SLFN14
HMX3
R3HDM4
KISS1R
DRC7
KCNN4
PPP1R14D
SPTAN1
PI16
CPOX
PLCL2
MAD2L1BP
GTPBP2
BIRC2
ANK1
RTN4
GYPE
TSPAN32
C11orf21
FGGY
MRGPRX1
LIMS1
KLF2
PPM1F
TSPAN33
RAB33A
ZNF117
ERV3-1-ZNF117
ERV3-1
GYPA
KIAA1586
MTSS2
HAGH
FAHD1
ZSCAN31
POLM
PCNT
C21orf58
MGAT5
FZD5
FAM83A
PHF19
SDE2
UBE2F
PRR5
EPB41
SCMH1
CMIP
FKBP8
CD2
CDC42EP1
RCC1
OR2C1
MFAP3L
TUBB1
TMEM9
PPP1R15A
RHAG
PLEKHA4
NPL
NXF3
HMBS
H2AX
SEPTIN5
GP1BB
ATG4D
THEMIS2
TMCC2
MINDY4
INMT
RAB32
CFAP410
EHD1
HDHD3
ZNF451
GATA1
RNF217
FAM214B
GADD45G
H1-0
GCAT
NUPR2
CHCHD2
TXK
STK11
DOT1L
C11orf96
PDK1
PRDM8
UBAC1
DNMT3B
COMMD7
THUMPD1
SBNO2
NARF
ZNF595
ARRDC2
HEXIM2
CCRL2
DENR
SEPTIN9
CRYBG1
SLC44A2
RUNX1T1
HTR4
IL1RL1
ARL4D
ZNF564
S100Z
TTC26
PAF1
DHTKD1
RMND5B
DCP1A
DDC
EIF2AK1
RNF144A
ZNF347
PTAFR
PCIF1
TRIM35
PTK2B
ANKRD61
RFC1
ZNF79
KIF3B
CCDC88B
TMBIM1
KCNH2
FECH
SLC38A8
KSR1
OR7A17
CASS4
CTPS1
SLC14A1
MYCL
SNAP29
PI4KA
SLC43A3
SPTBN4
BLVRB
SPRR2A
ABCB10
ASIC4
SLC25A42
TPGS1
MIER1
DNAI4
PISD
PXN
HPCAL1
TRIM63
ORAI2
SPINK4
MTRNR2L1
YJU2
TMOD1
MFSD12
TMEM275
TF
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
HDAC11
LIPC
SLC45A3
ALOX12
SMAP2
FAM210B
ATP6V0A2
UCP3
TNFAIP8
GDPD5
KNCN
YIF1B
KCNK6
PRDM11
CD300LF
TENT5C
TMEM258
FEN1
BCR
DNMT3A
SVBP
ERMAP
EXOSC9
RAD51AP2
SMCO1
RNF168
ZNF273
BHLHA15
ASF1B
CD59
CCM2