ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424762 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◢ SRX11668227: K-562

◢ SRX11668228: K-562

◢ SRX186627: K-562

◢ SRX20731966: K-562

◢ SRX20731967: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ SRX3322072: K-562

◢ SRX3322073: K-562

◣ SRX2424762: MCF-7

◢ SRX2424763: MCF-7

◢ CUX1: STRING

MEIS1
PPP2R1A
ABR
NANOG
TSHB
BNIP2
COX16
DUX4
PLCD3
ACBD4
TUBD1
RPS6KB1
EIF2AK2
SYCP2
PPP1R3D
FAM217B
MBTPS1
RGCC
BCAS1
FAM9A
SLC25A25
NAIF1
KHDRBS3
CUX1
FAM102B
SIRT4
PCDHB3
PCDHB2
KDM8
VBP1
KIAA1217
PHACTR3
ESR1
SLC30A1
PARD6B
SNRPD2
QPCTL
NUDT15
MBD3L1
LAPTM4B
DHX40
SALL4
FRG2C
VCP
FANCG
RPS29
IGFBP2
FNBP4
ATMIN
PPP6R3
TMEM214
PNPO
HCLS1
FAM240C
WDR74
STX5
CLK3
PAQR5
AASS
RPS11
RPL13A
COG3
CYP24A1
WDR12
CARF
WEE2
DENND11
CNPY1
SNRNP35
VPS16
PCED1A
CYP3A7-CYP3A51P
CYP3A7
MTMR3
CTBP1
STK3
H3C3
H1-2
SULF2
RDH12
RDH11
ZFHX2
THTPA
ITGA4
EZH2
IRF2BP2
PRKAB1
PDE6A
TMEM161A
WIPI1
NXNL2
TSEN54
LLGL2
CASKIN2
KPNA6
SLC25A35
RANGRF
GSTA4
GMDS
FBXL18
PMEPA1
PPP1R12B
TMEM107
CSTF1
AURKA
DHX37
BRI3BP
SNRNP70
SPAST
KRT19
ART1
CNTRL
C5
HOMER2
KALRN
SEMA4D
OR8G2P
ZGRF1
LARP7
RIF1
ZNF77
ERICH6B
UBE2D2
DIRAS1
MYLK4
CD36
WRNIP1
PTPRH
ZHX2
PSG2
GPD1L
GLDN
CRLF2
PALLD
EMP3
GTF2F2
CDK3
PARP11
POGZ
GSTP1
ACP6
AHCYL2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
TLE3
MGAT3
MIEF1
BCAS4
MTRNR2L1
MAP3K7CL
CCT8
OR1I1
STOML2
PIGO
NEDD9
NHSL1
OR4F6
OR4F15
ABL1
SLC25A24
RGMB
CD55
GRAMD1A
EXOSC5
BCKDHA
FREM2
MAF
RAB11B
RAP1GAP
PREP
DLG5
KYAT1
FRG2
MLLT3
HEXIM2
ITPKC
COQ8B
RNF19A
SLC6A3
SCCPDH
BORCS6
OS9
BCL11B
EIF4E
NEMF
LOC389199
AFAP1
NPR1
ILF2
SEMA3E
SNRPG
FAM136A
FBXW8
RPS3
MRPS23
DNAJC1
NTMT1
C9orf50
PHLDA3
LIMK2
TBP
PSMB1
RPN2
MROH8
SRI
AKAP1
RBAK-RBAKDN
RBAK
IGSF5
PFDN4
TSHZ3
COL23A1
CCDC200
TMEM237
SUSD6
CRADD
CAMTA1
TMED1
TENM1
CDK1
GUK1
PRR25
GNG13
PIH1D1
ALDH16A1
ONECUT1
PLA2G3
INPP5J
YY1
TM4SF19
ZFHX4
UBA5
ACAD11
TESK2
MMACHC
CCDC163
DEDD
TMEM131
BRIP1
ZMYND8
DHRS4
MRPL48
INTS8
RAP1A
TMEM161B
CPVL
CHN2
FKBP1A
TEX2
FTCDNL1
KRTAP5-11
TRIM55
LSG1
STX16
ATP6V0D2
B3GNT3
TRIM37
CELF2
PDF
NIP7
COG8
ZNF570
ZNF569
ADARB1
CHST12
SND1
PRPF38B
SLC7A8
KCNJ15
RNF212B
EXOSC2
SLC35A3
OSER1
OR4D2
ADCY3
ZNF704
TMEM205
RAB3D
CCDC159
RNF222
NECTIN4
PSMD6
HNRNPA3
LDLR
MCTS1
NIPSNAP1
BCAS3
PSKH2
FNIP2
BMP7
AP3S2
NOTCH2NLC
SAXO2
EFL1
MYO6
MVD
SYNPR
TJP3
PIP5K1C
PRR13
SNW1
ABCC5
GTPBP6
TBX2
NT5C2
ARPIN-AP3S2
ARPIN
ACTL6B
CCL3
CCL3L3
CCL3L1
MTFR1
UBE2V1
CA6
NCOA3
UBE3D
DOP1A
BASP1
CD14
TMCO6
NDUFA2
IK
DYNC2I1
KLHDC8A
ASIC5
SLC38A1
BFSP1
SMIM6
MAST2
PRKAR1A
EAPP
RNFT1
CXCL9
ART3
SKA2
PRR11
BZW2
VAMP1
COPB2
MIOS
STRIP2
C17orf58
ANKRD33
IL23R
CAND1
IMMP2L
ARSD
SLC48A1
RAPGEF3
TMEM141
CCDC183
SLC26A7
ABHD2
ZFYVE26
RAD51B
TAF4
MAP3K3
FAM160B1
SPINK1
PFN2
MTO1
CGAS
ZNF700
TET3
NEPRO
CUX2
WBP1
INO80B
GREB1
CTNNBL1
HDGFL3
RBBP5
KIFC1
TMF1
POMZP3
SHMT2
RHOB
PSMC6
CXXC5
RPS6KA5
DGLUCY
SPTSSB
METTL21A
AHCY
RGPD1
TTI2
HSFX4
EOLA2
USP32
TC2N
ETFDH
C4orf46
RAPGEF1
PMEL
MAL2
SLC35A5
ATG3
LBR
ZC3H3
H4C12
H2BC15
H2AC15
NTSR1
DHRS4L1
ZFAND3
CGRRF1
RACGAP1
VIPR2
ZNF585B
ZNF383
PDE4DIP
ACBD7
SGPP1
GLCCI1
ATP2C2
NACA2
RGS19
OPRL1
LKAAEAR1
ICE1
LRRC23
DOK5
APBA2
ARHGAP29
KIF3C
AGTR1
LATS1
TTC39C
OAT
ENO2
TMEM225B
METTL2A
MMD
POLG
HSFX3
EOLA1
TLE4
ZNF410
ALDH3B2
FXYD2
NOP58
MYO1C
TBL1X
TRIM7
QSOX1
FAM102A
PHRF1
ARRB1
LARP1B
GGCT
LMNB1
ID2
NAP1L1
SPIDR
VSIG10
TXN2
GDF15
FOXN3
SLC11A2
BICRA
SH3BGR
ZNF367
ATF1
RTEL1
SLC2A4RG
LIME1
MPZL1
GPBP1
LPCAT1
SLC12A3
LOC102724770
DGCR6
IKBIP
APAF1
PLEKHM3
ZNF263
FIGNL2
HNRNPH1
PPM1D
LUC7L2
FMC1-LUC7L2
FMC1
PPP6R1
APPBP2
IBTK
IFT46
ARCN1
TUBB4B
ATP5MC1
SLC4A9
FAM166A
RGPD2
TUBB6
TEX19
IKZF4
CACNG1
AFTPH
PAK2
FAXDC2
SMARCD2
NSUN7
POLR3GL
LIX1L
ANKRD34A
PLA2G2F
ELF3
PSMD12
PGS1
SFR1
CCND1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TMEM211
PCDHA13
PCDHA12
UBE2C
CLEC18B
CRLS1
ASB8
TRA2B
MARVELD3
PM20D2
SLC22A5
PJA2
INTS5
GANAB
AP2B1
PEX12
PCM1
SPATA2
BTN3A2
DACT3
RNF114
PPIL3
NIF3L1
OR2W1
ISG20
AEN
TPTEP2-CSNK1E
CRYGS
VGLL3
SNX20
SERPINI1
PDCD10
ZNF185
ARFGEF2
IL20
CAP2
CLN8
ABCC2
KBTBD6
ACSS3
FAM104A
C17orf80
BAIAP2
SLC2A3
TAF13
TRIQK
ZFAND6
PFKP
VPS26C
TXNRD1
RASEF
NCK2
SMYD3
SERPINA3
MAN2A1
HSPB1
TEX14
RAD51C
ETV3
DCLRE1B
AP4B1
MKRN2OS
ATAD2
FAM151B
AARS2
KNL1
C2CD4A
MB21D2
PSG9
HES7
ALOXE3
TACC1
UTS2B
CCDC50
RMND5B
MTMR11
BATF
SH3GL3
CHGA
CYB561
ZBED9
COPS4
RCAN3
R3HDM2
INHBC
C8orf33
DICER1
FOXF1
ACYP2
IL18R1
IQSEC1
BAHCC1
TAB3
PSME4
HSPH1
KYNU
SIK2
CNOT11
VPS4A
TMCO3
DCUN1D2
CELSR3
BRSK2
KIAA1522
CDK11A
FAN1
TRIP4
PCLAF
ABCG2
ACSS1
ERBB3
TNFAIP1
TMEM97
IFT20
CD276
MMAA
NMNAT1
LZIC
ALG1L
ZGLP1
FDX2
PLAAT3
GPR157
KRTAP3-2
KRTAP3-1
POLR3G
MBLAC2
PSMB7
LPAR2
DIO3
MTFMT
NSUN6
ARL5B
PDCD6
RPUSD3
YPEL3
ZBTB46
GDPD3
POLR2D
EIF2D
CHD1L
PRKAB2
XKR9
LACTB2
PDCD2
CEP78
ARHGEF37
HOMEZ
PKM
LMLN2
CRYAB
C11orf52
DIXDC1
HJV
ZNF213
HDAC8
RAB13
SRSF1
LIMA1
SLC39A1
JTB
CREB3L4
ZMYND12
PPCS
HS6ST3
GRN
GKN2
CCDC30
C14orf119
ACIN1
ARNT
LENG1
GATB
SNX8
ADAMTS6
MS4A8
NFIA
SAMD1
C19orf67
AKR1B15
CRABP1
TBC1D31
THOC3
ACTN4
LSM14A
DIAPH1
GMNN
PATJ
EHD4
RERG
UBE2H
SPAG16
HIPK1
SLA
ZHX3
LRIG2
SEPTIN4
MTMR4
CLIP4
RIPOR3
RHOD
ANKRD33B
CNIH1
CCDC174
PIKFYVE
TXNDC16
GPR137C
ZNF784
OR5A2
OR5A1
DUSP1
TRIM69
ZNF580
TAF9
RAD17
AK6
ZNF623
GRB2
RNF34
AIP
SLC33A1
LYPD6B
PDZRN3
TLCD3B
IGF2BP3
NME1-NME2
NME1
PDIA4
FAM227B
DTWD1
SLC22A16
ATXN7L3B
RPL35A
IQCG
PRUNE1
MINDY1
INTS2
FST
SPATC1L
ZNF507
GTPBP4
MYO5C
IGSF3
GPR21
CSNK1A1
POC1B-GALNT4
GALNT4
VWC2L
UQCRB
TMEM183A
SLC35E1
SSBP1
ATXN1
FOXD3
HIF1A
CYP27C1
SHF
RNASE4
ANG
SLC38A5
FTSJ1
ACO1
ARHGEF6
HOXB8
HOXB7
HOXB6
VAV3
ZMYM2
TMEM125
INSM2
C10orf67
PNP
ASMTL
CCL22
CX3CL1
YWHAB
SF3B4
PRKCI
PIP4P1
KLHDC4
KCNJ8
GABPB2
PRSS41
PLEKHO2
WBP1L
S100P
BRINP3
CPLX2
PIGX
CEP19
TMEM229B
HPS1
INAFM1
DHX8
NOL11
UBE2L5
TMEM69
MKS1
GPBP1L1
RAB5B
CDK2
HNRNPH2
TPD52
RGL1
ARPC5
AADAC
OTX1
CNNM3
RNF43
GRWD1
KCNJ14
GOLT1A
FABP7
CLDN4
FAAP24
CEP89
PCBP2
MXRA8
EPX
CSTF2T
GPR61
GNAI3
C2CD5
APMAP
ETFA
ZNF385A
KLF9
TMPRSS11F
WDPCP
AP3M2
MDH1
DBNL
COMMD2
DCP1B
BCAS2
CEBPG
PGM1
OPA1
TRPS1
HSH2D
LIMS1
BAX
PMPCB
ITSN2
ZNF398
LSM14B
GARRE1
PRRG2
NOSIP
TLR5
MARK1
CSDE1
CLIP1
GRAMD2B
GNB2
ATF7IP
SPAAR
HRCT1
HMGN1
SVIL
DARS1
CTSD
MIEF2
FLII
FOXJ2
DYNC1H1
SLC38A2
TOX4
RAB2B
TBX4
JPT1
EPB41L2
TGFB2
SULT1A4
SULT1A3
SUPT7L
SLC4A1AP
KRT39
ARMCX5-GPRASP2
ARMCX5
DENND4A
ID1
SULT2B1
TBC1D30
ERCC2
IPPK
EIF3C
TAS2R3
MMP16
EPO
FBXO7
SNRPB2
EVL
SLC22A17
SYCE1L
MON1B
MPP7
EXPH5
USP2
DYNC2H1
C9orf40
ADAM17
C8orf37
HNRNPA0
RBMXL1
OR13C9
OR13C5
OR13C2
KYAT3
ARAP2
C6orf89
SGK3
IMP4
CCDC115
TRAPPC9
PPIL1
AEBP2
AP1M2
CLTC
ATP7B
ALG11
SPINK4
AKIRIN2
ZNF572
GATA3
ACOX3
CEBPE
PHTF1
E2F8
H3C8
H2BC10
HSPA1L
HSPA1A
LSM2
ATG9B
ABCB8
KLHL12
STAT1
HBP1
SEPHS2
PSME3
BECN1
POLD4
TPCN1
GSKIP
ATG2B
STMN3
CEACAM7
C16orf54
ADCY6
ABCD4
NEBL
TSPYL4
DSE
RMND1
ARMT1
SPRED2
POLR3E
NHP2
SETDB1
PPP1R15B
EPHA7
OAZ2
REN
USPL1
ME1
HMGB1
HEG1
DOCK2
STX1A
PAXBP1
CS
RSRC1
SHOX2
TUT1
MTA2
NOTCH2NLB
IST1
SAR1B
FAM169B
CCNY