ChIP-Atlas: Target genes

Potential target genes for BRF1

Query protein: BRF1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2533317 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRF1's Target genes

◢ BRF1: Average

◢ SRX016998: HeLa

◢ SRX018607: HeLa

◢ SRX150661: HeLa

◣ SRX2533317: hESC H9

◢ SRX2533318: hESC H9

◢ SRX2533319: hESC H9

◢ SRX2533320: hESC H9

◢ SRX016557: IMR-90

◢ SRX150674: K-562

◢ SRX9698443: THP-1

◢ BRF1: STRING

WBP4
ELF1
SLC27A4
BCAR3
IMP4
CCDC115
MAP1LC3B
FBXO31
SMARCC2
PCGF2
ZFP36
PLEKHG2
NCOA7
OPN1SW
CCDC136
POLG
FCGR3A
SACM1L
PPP6R3
RAB11A
WFIKKN1
METTL26
H4C8
RPS29
KNL1
NEMF
PRMT5
ZNF839
LTA4H
C8orf37
FCGR3B
BRMS1
B4GAT1
LUC7L2
FMC1-LUC7L2
FMC1
HSPA6
NPR1
ILF2
TIA1
PCYOX1
ZBED9
DCT
PSMA3
NDUFS7
POLR3E
MPZL1
POM121L2
UBC
PLXDC1
LASP1
RS1
PPEF1
TRIM7
DPP9
HES7
ALOXE3
OR2B2
H2BC17
H2AC17
ZNF184
MDM4
OR1F1
HMGN4
CGB3
CGB2
CGB1
SHF
PRSS16
OR2V2
MYNN
ACTRT3
BORCS6
TMEM107
RNASE4
ANG
PAMR1
ABT1
OR6S1
RPL23
GAS7
FAM234B
ZNF552
ATXN7L3
ZNF70
VPREB3
ZNF789
ATP5MF-PTCD1
ATP5MF
ANKRD39
C9orf152
UBTF
KRBA1
CDH1
DUX4
CBLC
MTRNR2L2
MSH3
DHFR
IFNLR1
SIRPA
RAC1
CGB5
SMU1
CDKL4
MTRNR2L8
FRG2
COL23A1
ZER1
MTRNR2L1
FRG2C
KIF5C
PTPRN2
AFAP1
C1QTNF6
CNOT3
RNF24
H2AZ2
RGCC
CA9
COL27A1
CCM2L
TBC1D5
RPEL1
MVB12A
PEAR1
SLC25A44
SP8
THEG
MMP8
DYM
ZBTB5
MAMDC2
BTNL9
ULK2
MUC3A
GTPBP6
CRYAA
CRYAA2
IL4R
STAP2
PGK1
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
MAST3
IL12RB1
TMEM150B
KMT5C
PABPN1L
LOC102724770
DGCR6
STK17A
LYL1
RAB22A
SRP68
CC2D2A
SBNO2
PAXX
CLIC3
RAB40C
ADPRH
SEPTIN9
MOB1A
MXRA7
METTL23
SCARB1
RELT
ZFP1
ARNT
YWHAH
C22orf24
APOC4
NAT16
IGSF8
SYPL1
SHC2
SOWAHA
ORAI1
RAB8A
CFAP410
MAP2K1
RAB27A
PAQR4
KREMEN2
RP2
SUSD6
CMKLR1
TLCD4
SDF4
B3GALT6
PIM1
RGPD2
RGPD1
CDK3
C8orf33
NLRP12
MT1F
MT1B
DMRTB1
ZFR2
ATCAY
RBBP8NL
PDGFRB
CDIN1
VASN
ECHS1
ENTPD4
PLCXD1
PGD
ARPC1A
CCSAP
COL8A2
SELPLG
SLAMF8
FAAP20
ECHDC3
PKLR
FDPS
STING1
SSBP2
GRAMD4
MEFV
HSPE1-MOB4
HSPE1
HSPD1
ST3GAL1
CD300LF
SRPK3
CHRNA4
ANGEL2
EMILIN2
C7orf50
NAGK
C1orf198
ADAP1
ZP3
SLC66A2
CELF1
ZBTB6
RC3H2
CTSS
PARP2
ASF1B
ZNF324
WDR47
MTRNR2L10
CBFA2T3
ELK1
MIA3
SYT11
RAD51AP2
GON4L
GDF5
ZMPSTE24
TMCO2
SLC25A53
FAM199X
CYB5R3
ATP5MGL
GGCT
ATAD3A
CITED4
NUGGC
ELP3
ZNF335
RBBP5
MTRNR2L9
ROPN1L
RNF149
ZGRF1
RGL1
LARP7
SOX15
MPDU1
LOC100996842
EIF4A1
CD68
DPEP2
RASA3
RNF14
FER
KIAA0930
PHETA1
KDM2A
TRIP13
BRD9
PDSS2
CDH23
TUBGCP6
MED13L
S100A16
ARHGAP39
TJP3
SCRN1
COPS4
TRPM2
RWDD1
FGFR3
B4GALT4
ARID5A
MTRNR2L6
RAB7B
MLKL
TTC28
ACTR10
MFSD2A
FBXO25
ZNF784
SPON2
SLC22A5
TSNAX
DNM1L
PNPLA2
CRACR2B
VARS1
ANKLE2
RPL21
TMEM240
CCDC200
SLC2A6
TAOK3
SUDS3
UCN2
PFKFB4
MDM2
TMEM267
PLA2G2D
PELATON
IPO13
CDV3
MRPS7
MIF4GD
GGA3
EAPP
CYP51A1
CELSR1
CACTIN
RAB11FIP3
RAB40B
SLC39A4
CPSF1
TMEM187
LCN8
LCN6
LCN10
MRPS5
RND3
CCL3
RPL13
PTAFR
PDAP1
DNAJC5B
BUD31
WSB2
SCGB1A1
PMS1
ORMDL1
ICE1
CHST12
NFYC
KLHL36
SASH3
USP45
TSTD3
UBR7
GON7
CAP1
TTC16
TOR2A
PTRH1
RPS12
PYCR3
GFUS
ATF6
CD300A
SLC35C2
CYTH3
APOBEC3D
APOBEC3C
TNNI2
SYT8
RPL39
TPST2
SELENOF
MTHFD2
HS2ST1
SLC2A4RG
SHKBP1
LIME1
KCTD2
ATP5PD
RYK
ARHGAP26
ZDHHC19
TBL1X
SLC51A
NUP205
PTGES2
NVL
CAPRIN1
COL18A1
SLC19A3
ARRDC1
APOD
GNA11
FDXACB1
C11orf1
ALG9
PES1
LCN12
FBXW5
CTRC
C8G
PSMA1
PDE3B
CDK5RAP1
HENMT1
RGL3
AMY2A
TRAPPC5
SFI1
RETN
MCEMP1
FBXO9
EIF4ENIF1
CILK1
UNKL
NUP85
C19orf48
C16orf91
H3C12
DPH6
SAMD4B
LCNL1
GMFG
ATAD3B
ZNF93
CCDC166
TMED1
OST4
EMILIN1
PHRF1
MRGPRG
MRGPRE
GALR1
PNO1
DYNC1LI2
CCT8
HSPA1B
STAM2
TMEM170A
SMARCC1
SLC25A30
WDR74
STX5
RFX2
ZMYND19
PSMG2
LRRC3
CEP76
CDK5R1
KHK
ZNF576
IRGQ
UBE2I
RALGDS
GBGT1
DMRT2
RABL2B
TMEM30A
POLDIP3
CDKN2AIPNL
TMEM63A
TFB2M
RPS6
MOGAT3
LRRC14B
LEFTY1
DENND10
CNST
TBCK
COMMD1
CCT4
AIMP1
VWA1
S100A9
DHRS9
C6orf47
BAG6
ATAD3C
APOM
TBC1D14
LRR1
REXO1
ZNF808
TAF12
TRAIP
SKP1
RPL35A
NFKBIL1
LMLN
IQCG
DDX39B
ATP6V1G2
POLR2J3
GADD45GIP1
ART1
ZNF124
SNX32
SERPINC1
HADHB
HADHA
FAM187A
FAM184A
EFTUD2
CCDC103
TMEM121B
SPOP
HSD11B2
B4GALT1
ORAI2
SLC30A1
PTGES
UBE2J1
SYCP1
SMC2
RRP12
OR2T1
AP2S1
UCKL1
TSC1
KAT6A
GFI1B
ZRANB2
CHD7
VGF
SMIM15
SMAP2
RPL31
SIGLEC9
ARHGEF3
DOK3
DDX41
USP24
POLE2
KLHDC1
STK40
PHIP
NIPBL
CYB561D1
ATXN7L2
PIP4P1
PEX3
OSGEP
APEX1
ADAT2
ZC3H3
MAPKAPK5
GSDMD
DEFA6
DCX
PARL
CCDC170
ZNF658
TRPM1
MCF2L
LRRC47
ZCCHC3
ZC3H6
SLC22A15
HSD17B12
C20orf96
LOC400499
BCAS2
USP1
SIGLEC16
OXGR1
ANAPC5
RPS23
PSMD12
CCL3L3
CCL3L1
ATP6AP1L
RIN2
NGB
KLF1
GCDH
DNASE2
TSN
GOSR2
H3C8
H2BC10
SFRP4
PAF1
EPDR1
GOLGA5
INTS5
GANAB
GABPB2
CYP2A7
ATXN7L1
ZBTB45
SLC27A5
PBLD
HNRNPH3
BZW2
ANKMY2
PPP2R3B
HLX
CALM1
MOB1B
ICAM5
ICAM4
MRPL55
HBEGF
TMEM242
HSPA9
HDHD5
ANAPC7
PMF1-BGLAP
PMF1
CXCR5
EPOP
TPK1
EEF1A1
USP17L22
USP17L21
USP17L20
USP17L12
TOR1AIP2
TOR1AIP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SRD5A1
NME6
MUC1
CYP4F11
ADGRA2
TSACC
TRAPPC2L
POLR2J2
NTNG1
GALNS
COL9A2
CCT3
ANP32E
DCTN1
BICDL1
PTPRH
STK38
PSMC3
NNAT
BLCAP
WIPI1
C1orf159
TSPAN4
POLR2L
NUDT4B
FNDC3A
DPY19L4
ZPBP2
TMCC2
PPCDC
IKZF3
ECM1
VDAC2
FFAR4
FFAR2
AGMAT
SNAP47
JMJD4
SIRT4
CDK5RAP3
RAD52
NME1-NME2
NME1
MBNL1
FRAT1
TWF2
SAMSN1
RBKS
PPM1M
MGAT1
CLN8
BTBD8
BABAM2
SAR1B
MYLK3
VTI1B
RPS13
CEBPG
SLC28A3
SEC61B
FARSB
ALG2
SLC35F6
GORAB
DCTN4
RBM34
SLC35B1
SFTPD
KIF2C
KEAP1
TRAF7
RPS7
RAB26
XKR8
TM9SF2
NOTCH1
LPXN
GXYLT2
FOXJ3
DDO
CTNNB1
PANX1
MATN1
ATP5MG
SLC5A4
RPS10-NUDT3
RPS10
HCAR3
GRK3
PPIAL4H
IGFBP7
RXYLT1
FUS
TSSK4
TM9SF1
PPIAL4F
PPIAL4E
PPIAL4D
IPO4
CMAS
SUCNR1
MRPL34
DDA1
ACTN1
ABHD8
TNIP3
LYRM4
IFNGR1
FRMPD4
FARS2
HMOX1
HCFC1
ADAMTS9
PSMD4
PLEKHM2
IBA57
TAF9
SF3B3
RAD17
PROSER1
NHLRC3
HSPH1
EXO5
COG4
AK6
ZSWIM4
UHRF2
NDUFA4
MED23
GPR183
EVI2B
EVI2A
ENPP3
CORO2A
ANKRD63
SVBP
PGAM1
FAM174B
ERMAP
ADORA2A
PRMT1
IRF3
GNAI2
EXOSC5
BCL2L12
BCKDHA
TEX45
POLR2E
PEX11G
OR52W1
MIB2
GPX4
CDC73
C11orf42
UBE2D3
TATDN3
SLC12A9
RPS27
RAB13
PHC2
OLFML2A
NSL1
JTB
CISD2
CFDP1
TOM1
TNPO1
SPATC1L
TMEM238
TMEM190
TAF1A
RPL28
PCDH1
NIPA2
HAS3
SENP6
RPS27A
MSANTD2
ESAM
CLHC1
RASA2
MOK
AGO2
TAF4
SH3BP2
ALDH1B1
TPPP3
TCFL5
DPH3P1
CTSB
ZZEF1
PARP16
CYB5D2
XPNPEP3
ST13
S1PR4
NCLN
DNAJB7
CDK5RAP2
PALM3
MISP3
FNTB
TOMM40L
NPIPA1
MMAA
JRK
FCER1G
DENND2D
APOA2
OAZ3
MRPL9
CKS2
ZNHIT1
PRKCZ
PLOD3
PEX16
MRTO4
LARGE2
FAM104B
EMC1
DGKZ
ACADM
TEAD2
BCR
ODF3L2
FERMT3
CCNC
ZFP69
KLF2
FAM104A
C17orf80
RPL5
RHOC
PTPN3
EXOSC8
ALG5
WDR24
STUB1
RHBDL1
KBTBD11
JMJD8
CCR1
AXDND1
USP17L19
USP17L11
SCRIB
KLHL20
EIF2D
ACSF2
PSMD1
NUF2
NARF
KDM4B
EPB41L1
DCP1A
CYBC1
BIN1
USPL1
USP42
TGFBI
TARP
PRRG3
HMGB1
C3AR1
SF3A3
RPL7
RDH10
CCDC102A
ADGRG5
TBC1D25
SFPQ
POLR2B
PAK1IP1
OR6B2
NOA1
NDUFA10
HSH2D
FCGR2A
CNIH3
C6orf52
LPAR1
DOCK8
TRMT11
TRIT1
TCF12
POLR2K
FUT4
FBXO43
ZNF764
RPL15
RLF
PTCRA
PRR5
NKIRAS1
MPHOSPH6
CNPY3
HEXIM2
FGGY
DNAJB2
ABCG1
TNN
CAPN15
BID
ACVR1
AATK
TBL1XR1
RPL18A
RHEX
PPIH
NOTCH2NLA
JAK3
TNFAIP8L3
SDHD
PLEKHM3
ZBTB34
TRMT2A
SLC9A3
RPS6KA2
RMI1
RIOX1
RANBP1
HNRNPK
GBA
UTRN
RACK1
DYNC2I1
DLG2
CD36
ATP2C1
AKR1C3
SLC25A32
PSTPIP1
FLI1
DCAF13
SEC13
SAMHD1
PHLDA2
GLDN
ELOVL1
CYP19A1
CDC20
B4GALT3
YBX1
TMEM160
SEMA6B
R3HDM4
NPAS1
KISS1R
CITED2
CEBPA
CBX6
ARID3A
ZNF543
ZNF219
WDR36
TMEM253
SLC39A7
RXRB
RING1