ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
SLC2A10
ADNP
TRIM3
TIMM10B
ARFIP2
BCL3
DUX4
STARD10
POLR3B
MTRNR2L8
MTRNR2L2
MSH3
DHFR
PLCB4
RTBDN
MAST1
BMP7
ARL14EP
REXO4
ADAMTS13
SLC23A1
PROB1
MZB1
MYADM
C9orf152
CCDC59
MRPL44
MOB4
ERGIC1
TET3
S100A16
S100A14
PSMD6
AFF4
ARHGAP40
FLYWCH2
PCCA
PSRC1
SPRYD3
KRT18
EXOC2
GNPNAT1
STX16
TACO1
CUEDC1
NOL11
COL23A1
MUC5B
ZNF500
TMEM87B
TTC39A
UCHL5
RO60
ZNF609
KIF5C
CNOT3
LMNB2
ANKRD60
PMEPA1
BAZ2A
FLYWCH1
PAQR4
KREMEN2
SCAMP1
SMG8
FASN
ART1
FAM221A
N4BP3
ZFP36
PLEKHG2
KMT2C
PTPRN2
INKA2
DDX20
ARHGAP39
GNAQ
IQANK1
FAM83H
TNFRSF1A
ALG8
ZNF217
FAM20B
USPL1
HMGB1
SKA2
PRR11
SNAP29
PI4KA
TOP3A
SMCR8
DNAJC10
LDAH
MED23
ENPP3
MADD
GGPS1
ARID4B
REPS1
ZG16B
EIF1AD
CST6
BANF1
FAM240C
HIPK1
ZMYND8
DYNC1LI1
FOXA1
NOTCH2
GTPBP6
EAPP
FAM207A
PHRF1
TPD52
EMB
IER3
FLOT1
NOTCH2NLA
REXO5
ERI2
BLOC1S5
EED
SEC16A
C9orf163
VPS13B
FLNA
EMD
PSMB7
CYRIB
BCAS2
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
ZNF860
OSBPL10
GRK6
EDN1
NDUFS3
KBTBD4
FAM180B
SNRPB2
KANSL3
FER1L5
MLPH
ZNF408
ARHGAP1
BCAS4
IPPK
USP32
FAM227B
DTWD1
SCARB2
FAM47E
MARCHF7
NQO1
ATP5MC2
ZC3HC1
DUSP6
DSTYK
VPS37B
RPS7
DPY19L4
RBBP5
SLC25A36
SLC34A3
RNF224
RNF208
CYSRT1
LEMD2
CPNE8
ZNF518A
NOTCH2NLC
TBC1D30
ECT2
MTRNR2L1
TRIM37
TMEM199
SEBOX
POLDIP2
RBSN
SMIM14
PPM1H
ID1
LSG1
CYREN
INTS12
GSTCD
FRG2
CEP63
ANAPC13
CHD8
NOTCH2NLB
WDR11
MEF2A
PHF14
WDR97
MAF1
CYC1
DCAF10
USP38
PPIP5K1
CKMT1B
CARMIL1
RUSC1
ESRP2
PLA2G15
PPM1J
TAFA3
GSE1
MRPL1
TMEM210
LRRC26
APPBP2
CA4
SCYL3
TRIM33
SNAPC1
NOXA1
LUC7L2
TOR1AIP2
TOR1AIP1
TMEM183A
PMVK
SPOP
NECTIN1
TMEM262
TFF3
AP1M1
PMPCB
DEDD
CXXC5
USP9X
NEK5
AP3B1
ARHGAP8
UNK
H3-3B
H2BC21
H2AC21
H2AC20
OTUD7B
UST
RPL37
CARD6
SP1
AP3S2
TEX14
RAD51C
ARL8B
DNAJC25-GNG10
DNAJC25
TFF1
EEF2K
RTEL1
STMN3
TTC6
PCYT1A
BCAS3
TLNRD1
SULF2
SLC39A6
MICA
ZBED8
IFRD1
GABPB1
ADPRHL1
SLC33A1
ATAD2
MAPK9
FFAR2
CPOX
TOP3B
SYNGR2
UTP25
PPIP5K2
GIN1
MMADHC
GNPDA2
FRG2C
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
INTS2
ZNF410
ALG10
BRINP3
SETD9
PDE8A
TSKU
PGK1
CNBP
BRIP1
ALG10B
TSEN54
LLGL2
CASKIN2
SPHK2
RPL18
FAM83E
TRIB1
LRP6
MDM4
CIAO3
DDX59
MUC2
ZFP62
TBPL1
ZNF197
KRR1
NRAS
ZBTB7B
LENEP
GSPT1
SWSAP1
ATR
NUP54
TPTE
DGKA
PLXNB2
LNPEP
PPM1D
SRSF7
KIF26A
CLTC
RASEF
MUC3A
EGR1
NPM1
TRIP4
PCLAF
MRPS33
GOLM1
PPP2R5E
PDS5A
LINS1
ASB7
PSMC5
FTSJ3
SNRPB
NCOA3
EHMT1
ARRDC1
ZNF446
ZNF324
GOLGB1
VMP1
PTRH2
CRNKL1
CFAP61
ERBB3
TANC2
LSM5
AVL9
IL2RA
AHCYL1
RHEBL1
KMT2D
TPD52L2
ABHD16B
BZW1
HNRNPA2B1
CBX3
SGPP1
SLC24A1
INTS14
ATXN2
SF3A3
B3GAT2
ZFYVE9
ERCC6L2
ZC3H10
RPL41
ESYT1
OSER1
PIGC
C1orf105
SLC35A1
RPL12
LRSAM1
HMG20B
RAB1B
TUBD1
RPS6KB1
METTL2A
GABPB2
RPS29
HES1
RGS19
OPRL1
LKAAEAR1
VCAN
ZMPSTE24
KCNH8
TPK1
WWP1
ARFGEF2
RNFT1
DCLRE1B
AP4B1
RHOH
MESP2
TBATA
NPAS4
CLDN4
KMT5A
ETFA
RABGEF1
SLC35F6
FAM110C
SIRT4
RPS6KB2
PTPRCAP
WDR93
PEX11A
HSFX3
EOLA1
C6orf89
NSUN5
ZNF106
SNAP23
HSFX4
ARG2
CPLX2
CALHM4
BHLHE40
HTR5A
BCAS1
MTFR1L
CAV3
ERN2
TRIB3
IQSEC3
MFSD4A
WDR74
STX5
NBPF6
SLC45A4
PGLYRP2
EIF2S1
ATP6V1D
KRT86
PRODH
LOC102724788
PYGB
MED26
TGFB3
IFT43
RACK1
FBXO46
ZDHHC1
MKRN1
DGKZ
ADARB1
CCPG1
C15orf65
SULT1A4
SULT1A3
GSK3B
TRMT12
TBX2
PPP4R3A
ECH1
DHTKD1
FAM151B
MXRA8
ST6GALNAC1
METTL3
SLC7A8
MTMR12
CAMK2N1
TECPR1
NR1H3
ACP2
SPO11
ZNF655
FAM200A
RIPOR3
SLC22A5
PARD6B
HSH2D
SLCO4A1
RPS26
H4C8
FOSL1
CCDC85B
PFDN4
CAP1
TXNDC11
RNF39
PPP1R11
POLR1H
SYCP2
FAM217B
RPEL1
KLC1
SLC25A40
DBF4
ZSWIM1
SECISBP2
CKS2
SYTL1
HEG1
INSM2
CCDC174
MISP3
REN
TMEM251
MOAP1
SPATA13
NMNAT1
LZIC
TNS4
DMTF1
UBE3C
RALGDS
SLC39A1
JTB
CRTC2
CREB3L4
SPTBN4
BLVRB
CYP2J2
ARID3B
KAZALD1
IDH3A
FKBP4
ANKRD35
PRLH
IGFBP4
FAM24A
CRACR2A
CYP27C1
DEF6
KRT8
SNRPA
C19orf54
CST3
TEP1
NBPF1
PTPRU
MECR
TMEM95
KCTD11
LARGE1
ANXA6
DPF1
SLIRP
ALKBH1
PRORP
PPP2R3C
UBA1
SRMS
PTK6
FNDC11
RMND5B
TXNDC5
NTSR1
TAF12
ARID4A
RRM2
PLEKHN1
PERM1
ZKSCAN2
LIN54
RAPGEF6
MB
NEMP1
NAB2
TSC2
NTHL1
UBC
ARPP19
GREB1
ZNF681
RPSAP58
SLC16A5
BAIAP2
RIPPLY2
NEDD9
CYB5R4
RNF139
NCBP2AS2
NCBP2
HIVEP3
RPL32
FEM1A
DHX8
PIP5KL1
DPM2
CCNL1
LAMTOR1
ITGB5
ANAPC15
MICALL2
BARHL1
SPINK4
VPS26C
COMT
DHRS3
SH3YL1
ACP1
SUMO3
MYBPC3
KRT19
RBBP8NL
ESR1
NXNL2
HDAC11
LRRC31
HCAR3
HCAR1
PPL
UAP1L1
SAPCD2
ANO7
RHOBTB2
TSPAN13
NKX1-1
DDX42
CCDC47
HEATR6
AKAP1
PTPN1
MRPS11
MRPL46
PNKD
NUCKS1
FAXDC2
ALLC
SMS
LHPP
PABPC1L2B
REM2
TPD52L1
PRR7
DNAAF3
ZNF23
CD59
CHD4
ING4
FAM107B
ASB13
SLC25A24
RPL35A
IQCG
ODC1
ALDH3B2
MYO5C
RARA
UGT2B15
CDC42EP3
FNBP4
FANCF
TDRD10
SHE
CST4
TMEM30B
CELSR2
PEX14
PDE4D
RBM19
CYP4V2
PLEKHF2
RIPK3
MTOR
IL12A
ADCY4
E2F2
ADSS1
PPIH
GFPT1
IRF2BP1
CAPN8
ZNF335
CRYM
CST2
PRKAG2
MYEOV
THAP6
POLR3F
NARF
DZANK1
CYBC1
STRA6
AHSG
GORAB
EXD2
CANT1
TPCN1
HSF1
BOP1
DIDO1
WASHC5
NSMCE2
KCNH7
ISG20
FAM83A
CASZ1
AMBRA1
TXNRD1
LIMK2
TBC1D15
SYT5
SPIN1
GTF2H2C
NME1-NME2
NME1
MRPS23
RAB15
GTF2H2C_2
RAC3
LRRC45
CHD2
CENPX
TAOK3
SUDS3
SFXN2
ARL3
FAM228A
TRAPPC9
SLC9A3R2
USE1
RASAL1
TOMM34
STK4
DBNL
ZHX1-C8orf76
ZHX1
GTF2H2
SLX4IP
MKKS
TUBG1
SLC1A5
RGS9
RETREG3
CSTF1
AURKA
ELL
VPS37C
CSRP1
TUFT1
GPAA1
EXOSC4
OSBPL7
MRPL10
LRRC46
DCXR
CNOT11
SLC13A1
ZBTB8OS
TNRC18
RBBP4
POLR2J3
GOLGA1
PDE11A
NPDC1
HDGFL3
ENTPD2
ABCC5
TMEM205
RAB3D
NBPF4
CCDC159
CCDC9
RUVBL1
EML1
SPRED2
GSN
ZNF398
TEX22
PROSER1
NHLRC3
MX2
ZNF576
SLC13A2
IRGQ
EIF3D
DDA1
YPEL3
RNF223
GDPD3
CALML5
SCIMP
PPM1A
OSBPL2
PPM1E
ESCO1
ZNF514
ZNF2
FBP1
SPTLC2
DDX23
LYRM1
DCUN1D3
SNRPD2
QPCTL
CCDC149
CA5A
BANP
AP4E1
ANKS6
PPCDC
PNPLA7
MRPL41
ERMP1
VPS11
ZNF572
EPN3
ZFHX2
THTPA
CTCF
BPNT2
UCKL1
TRIM59
MIER1
DNAI4
DHX40
HELB
CDH18
AADAC
AMOTL2
YIF1A
TMEM151A
NFKBIZ
NEUROD4
NDUFB6
SUSD2
LINGO1
HLTF
USP31
TFIP11
GSTP1
SYCE1L
MON1B
LPCAT1
MARCHF10
DEXI
CLEC16A
IPO11
FTH1
DIMT1
UEVLD
TEN1
KLK12
ACOX1
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
RAB7A
ZMAT2
HARS2
HARS1
OSGIN1
GRHL2
SLC51B
PALM3
TMTC3
HOMER2
CEP290
FURIN
CCDC97
COX16
BCL2L13
ATP6V1E1
SULT2B1
SMIM6
ASB2
CCDC200
ZNF44
UMAD1
JUND
IQCN
EIF4B
CAP2
WDR55
PRKAB2
DND1
CHD1L
GPSM1
CARD9
GGCT
TOB1
CIB3
VPS33A
PARP10
GRINA
SCAMP4
DSTN
BFSP1
ADAT3
PARP16
LOC102724770
GATAD2B
DGCR6
SEPTIN9
RMDN2
NOC2L
KLHL17
EIF4A2
TTC9B
SDC1
CCNP
EFHC1
UMODL1
CALM1
CSNK1A1
YWHAZ
HYAL2
HYAL1
TACR2
RMND1
ARMT1
NACA2
GIPC1
PKP2
UBALD1
MGRN1
BICD2
GTF2A1
TMBIM6
KIF21A
TPTEP2-CSNK1E
TRIM4
TNFAIP1
MRPS30
IFT20
GRHL1
GJC3
C3orf14
TDRD9
MAB21L4
CROCC2
ATP5MPL
ABCF3
ITIH6
HHATL
PACSIN3
TNFAIP8
SLX1B
SLX1A
P2RY6
BOLA2B
BOLA2
GRPEL2
RGL2
PFDN6
NUDCD3
VMAC
NDUFA11
GPRC5A
CLK3
CAPS
LAD1
JUP
UFL1
SSBP2
RIN2
NTMT1
CD55
C9orf50
PDE12
LPIN1
KLHL12
TSC22D1
TMEM107
XKR7
NEK10
RTF2
UBE2K
FGF19
CST1
CDK5RAP2
PRSS41
EVL
GSTA4
ACOT7
TJP2
LFNG
RPS27
RAB13
ZWILCH
TRIM47
SNAPC5
RPL4
CEP128
ZNF277
RNF130
PRKCZ
EPPK1
DOCK4
ZNF564
MFSD4B
USP4
MRPL33
EBAG9