ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
ADNP
TRIM3
POLR3B
MTRNR2L8
MTRNR2L2
MSH3
DHFR
PLCB4
RTBDN
MAST1
BMP7
ARL14EP
REXO4
ADAMTS13
MZB1
SLC23A1
MYADM
C9orf152
CCDC59
MRPL44
MOB4
ERGIC1
S100A16
PSMD6
AFF4
ARHGAP40
PCCA
SPRYD3
KRT18
EXOC2
GNPNAT1
STX16
TACO1
CUEDC1
NOL11
COL23A1
MUC5B
ZNF500
TMEM87B
TTC39A
UCHL5
RO60
ZNF609
CNOT3
PMEPA1
BCL3
BAZ2A
PAQR4
KREMEN2
SCAMP1
SMG8
FAM221A
N4BP3
PLEKHG2
KMT2C
INKA2
DDX20
ARHGAP39
GNAQ
IQANK1
FAM83H
ALG8
ZNF217
FAM20B
USPL1
HMGB1
SKA2
PRR11
SNAP29
PI4KA
TOP3A
SMCR8
DNAJC10
LDAH
MED23
MADD
GGPS1
ARID4B
REPS1
ZG16B
EIF1AD
BANF1
HIPK1
ZMYND8
DYNC1LI1
NOTCH2
GTPBP6
FAM207A
TPD52
EMB
NOTCH2NLA
REXO5
ERI2
BLOC1S5
EED
SEC16A
C9orf163
VPS13B
FLNA
PSMB7
CYRIB
BCAS2
ZNF860
OSBPL10
GRK6
EDN1
NDUFS3
KBTBD4
SNRPB2
KANSL3
FER1L5
MLPH
ZNF408
ARHGAP1
BCAS4
IPPK
USP32
FAM227B
DTWD1
SCARB2
FAM47E
MARCHF7
NQO1
ATP5MC2
ZC3HC1
DUSP6
DSTYK
RPS7
DPY19L4
RBBP5
SLC25A36
SLC34A3
RNF224
LEMD2
CPNE8
ZNF518A
NOTCH2NLC
TBC1D30
ECT2
MTRNR2L1
TRIM37
TMEM199
POLDIP2
RBSN
SMIM14
PPM1H
ID1
LSG1
CYREN
INTS12
GSTCD
FRG2
CEP63
ANAPC13
CHD8
NOTCH2NLB
WDR11
MEF2A
PHF14
WDR97
MAF1
DCAF10
USP38
PPIP5K1
CKMT1B
CARMIL1
RUSC1
PLA2G15
TAFA3
PPM1J
GSE1
MRPL1
TMEM210
LRRC26
APPBP2
SCYL3
TRIM33
NOXA1
LUC7L2
TOR1AIP2
TOR1AIP1
TMEM183A
PMVK
DUX4
SPOP
NECTIN1
TFF3
AP1M1
PMPCB
DEDD
CXXC5
USP9X
NEK5
AP3B1
UNK
H2BC21
H2AC21
H2AC20
H3-3B
OTUD7B
UST
RPL37
AP3S2
TEX14
RAD51C
ARL8B
DNAJC25-GNG10
DNAJC25
EEF2K
STMN3
RTEL1
TTC6
FOXA1
PCYT1A
BCAS3
TLNRD1
SULF2
SLC39A6
MICA
ZBED8
IFRD1
GABPB1
ADPRHL1
SLC33A1
ATAD2
FFAR2
CPOX
TOP3B
SYNGR2
UTP25
PPIP5K2
GIN1
MMADHC
GNPDA2
SCNM1
LYSMD1
INTS2
ZNF410
ALG10
BRINP3
SETD9
PDE8A
PGK1
CNBP
BRIP1
ALG10B
SPHK2
RPL18
FAM83E
TSEN54
CASKIN2
TRIB1
LRP6
CIAO3
DDX59
MUC2
ZFP62
TBPL1
ZNF197
KRR1
NRAS
ZBTB7B
GSPT1
SWSAP1
ATR
NUP54
TPTE
DGKA
LNPEP
PLXNB2
PPM1D
SRSF7
KIF26A
CLTC
RASEF
EGR1
NPM1
TRIP4
MRPS33
PPP2R5E
PDS5A
LINS1
ASB7
PSMC5
FTSJ3
SNRPB
NCOA3
ZNF446
GOLGB1
VMP1
PTRH2
CRNKL1
CFAP61
TANC2
LSM5
AVL9
AHCYL1
KMT2D
PTPRN2
TPD52L2
ABHD16B
BZW1
HNRNPA2B1
CBX3
SGPP1
SLC24A1
INTS14
ATXN2
SF3A3
B3GAT2
ZFYVE9
ERCC6L2
ZC3H10
RPL41
OSER1
PIGC
SLC35A1
RPL12
LRSAM1
HMG20B
RAB1B
TUBD1
RPS6KB1
METTL2A
GABPB2
RPS29
HES1
OPRL1
LKAAEAR1
VCAN
ZMPSTE24
KCNH8
TPK1
WWP1
ARFGEF2
RNFT1
DCLRE1B
AP4B1
RHOH
NPAS4
KMT5A
ETFA
RABGEF1
FAM110C
SIRT4
RPS6KB2
WDR93
PEX11A
HSFX3
C6orf89
NSUN5
ZNF106
SNAP23
HSFX4
ARG2
CPLX2
CALHM4
HTR5A
BCAS1
MTFR1L
ERN2
TRIB3
IQSEC3
MFSD4A
WDR74
SLC45A4
EIF2S1
ATP6V1D
PRODH
LOC102724788
MED26
TGFB3
RACK1
FBXO46
ZDHHC1
MKRN1
DGKZ
ADARB1
CCPG1
C15orf65
GSK3B
TRMT12
TBX2
PPP4R3A
ECH1
DHTKD1
MXRA8
ST6GALNAC1
METTL3
MTMR12
TECPR1
NR1H3
ACP2
SPO11
PARD6B
HSH2D
RPS26
H4C8
FOSL1
PFDN4
CAP1
TXNDC11
PPP1R11
KLC1
SLC25A40
DBF4
FRG2C
INSM2
CCDC174
RPEL1
TMEM251
MOAP1
TNS4
DMTF1
UBE3C
RALGDS
ZNF655
SLC39A1
CREB3L4
SPTBN4
BLVRB
CYP2J2
ARID3B
KAZALD1
IDH3A
IER3
FLOT1
FKBP4
FAM24A
CRACR2A
FLYWCH2
DEF6
SNRPA
C19orf54
CST3
TEP1
NBPF1
MECR
TMEM95
KCTD11
DPF1
SLIRP
ALKBH1
PRORP
PPP2R3C
UBA1
SRMS
CKS2
ARID4A
RRM2
PERM1
ZKSCAN2
LIN54
RAPGEF6
NAB2
UBC
TFF1
ARPP19
GREB1
ZNF681
RPSAP58
BAIAP2
CYB5R4
RNF139
NCBP2AS2
NCBP2
HIVEP3
RPL32
DHX8
DPM2
CCNL1
ANAPC15
MICALL2
BARHL1
VPS26C
COMT
DHRS3
SH3YL1
ACP1
SUMO3
MYBPC3
RBBP8NL
ESR1
HDAC11
LRRC31
HCAR1
SAPCD2
ANO7
RHOBTB2
TSPAN13
NKX1-1
DDX42
CCDC47
HEATR6
AKAP1
PTPN1
MRPS11
MRPL46
PNKD
NUCKS1
SMS
LHPP
PABPC1L2B
REM2
TPD52L1
PRR7
CD59
CHD4
LLGL2
ING4
FAM107B
SLC25A24
RPL35A
IQCG
ODC1
ALDH3B2
RARA
UGT2B15
FNBP4
FANCF
CST4
TMEM30B
PDE4D
RBM19
CYP4V2
PLEKHF2
MTOR
ADCY4
PPIH
GFPT1
CAPN8
EHMT1
ZNF335
CRYM
PRKAG2
THAP6
POLR3F
DZANK1
CYBC1
AHSG
GORAB
EXD2
CANT1
TPCN1
HSF1
BOP1
DIDO1
WASHC5
NSMCE2
KCNH7
ISG20
FAM83A
AMBRA1
TXNRD1
TBC1D15
SYT5
SPIN1
GTF2H2C
NME1-NME2
NME1
MRPS23
RAB15
GTF2H2C_2
CHD2
TAOK3
SUDS3
SFXN2
ARL3
USE1
RASAL1
STK4
ZHX1-C8orf76
ZHX1
GTF2H2
SLX4IP
MKKS
TUBG1
SLC1A5
RGS9
RETREG3
NXNL2
CSTF1
AURKA
VPS37C
CSRP1
TUFT1
GPAA1
EXOSC4
OSBPL7
RAC3
ZBTB8OS
TNRC18
RBBP4
POLR2J3
KIF5C
GOLGA1
PDE11A
NPDC1
HDGFL3
RAB3D
CCDC9
RUVBL1
SPRED2
GSN
ZNF398
TEX22
PROSER1
NHLRC3
MX2
ZNF576
SLC13A2
IRGQ
EIF3D
RNF223
SCIMP
PPM1A
PPM1E
ESCO1
ZNF2
DDX23
LYRM1
DCUN1D3
SNRPD2
QPCTL
CCDC149
BANP
AP4E1
ANKS6
PNPLA7
MRPL41
VPS11
EPN3
ZFHX2
THTPA
CTCF
BPNT2
UCKL1
TRIM59
MIER1
TSKU
DHX40
HELB
AADAC
YIF1A
TMEM151A
SLC16A5
NFKBIZ
NEUROD4
NDUFB6
SUSD2
LINGO1
HLTF
USP31
TFIP11
GSTP1
MON1B
DEXI
CLEC16A
IPO11
FTH1
UEVLD
TEN1
ACOX1
ACY1
RAB7A
HARS2
HARS1
GRHL2
SLC51B
MISP3
TMTC3
CEP290
FURIN
CCDC97
TMEM205
COX16
CCDC159
BCL2L13
SMIM6
ASB2
ZNF44
UMAD1
JUND
EIF4B
CAP2
WDR55
PRKAB2
CHD1L
GGCT
TOB1
CIB3
VPS33A
DSTN
BFSP1
GATAD2B
SEPTIN9
RMDN2
PLEKHN1
EIF4A2
EFHC1
CALM1
CSNK1A1
YWHAZ
HYAL1
RMND1
ARMT1
KRT8
PKP2
UBALD1
BICD2
GTF2A1
TMBIM6
KIF21A
TNFAIP1
MRPS30
IFT20
GRHL1
GJC3
C3orf14
MAB21L4
ABCF3
HHATL
SULT1A4
SULT1A3
BOLA2
GRPEL2
RGL2
NUDCD3
VMAC
NDUFA11
CLK3
LAD1
UFL1
SSBP2
NTMT1
CD55
PDE12
LPIN1
KLHL12
TSC22D1
TMEM107
XKR7
RTF2
UBE2K
CST1
CDK5RAP2
PRSS41
GSTA4
ACOT7
TJP2
LFNG
RPS27
RAB13
SNAPC5
CEP128
ZNF277
RNF130
PRKCZ
EPPK1
DOCK4
ZNF564
MFSD4B
USP4
MRPL33
EBAG9
MKRN2OS
MKRN2
NMRAL1
HMOX2
ITGB4
ANKRD17
ZFP36
NME6
EEF1AKNMT
ATP5MPL
SGO1
FAM222A
RAET1L
PTPN6
FBXW2
C12orf57
PPP6R1
PDAP1
CAPNS1
BUD31
AGR3
HERPUD1
ARL2
ADAM20
TDRD7
NPW
SRP72
SLC25A32
DDX50
DCAF13
GTF3A
EEF2KMT
ADAM8
WDHD1
SOCS4
TSC2
RBM45
NTHL1
CKMT1A
CALML5
SCRIB
RGMB
P4HB
DLGAP3
CYSRT1
TAB3
MACROH2A1
IPO4
BOLA2-SMG1P6
UNC45A
HDDC3
SNX1
CIAO2A
CHRM4
MATN3
KRIT1
ANKIB1
FMN1
EYA3
SLC44A2
PRR15
CDH26
ZDHHC12
SMNDC1
CAPZB
AKIRIN2
PCTP
PALLD
LRCH4
FBXO24
CD63
TSNARE1
DIO1
ANKRD13D
KCNB1
TMEM94
SEC13
TCAF1
SNAP25
RBFOX3
HOMEZ
HM13
CSF3R
ST20-MTHFS
COMMD1
CCT4
HIBCH
ZNF367
H2BC4
H2AC6
GTSE1
ALG13
SMIM35
SGO2
RPS11
EPHX1
CTSZ
SYVN1
PIP5K1A
PPP1R3E
BCL2L2-PABPN1
BCL2L2
SGK3
PARP2
MON2
LRRC6
CD82
TPH2
RCAN1
LMAN1L
LDB3
C8orf76
RNF24
PPP5D1
LIN28A
CALM3
RRBP1
MAZ
DDX46
TMEM222
TIPRL
RABEP1
FOXJ3
CCDC22
CACNA1F
NTAN1
SEC22B
GAPVD1
UBR7
RAC1
GON7
C19orf67
ARNT
SERPIND1
SRFBP1
GCN1
TNPO2
SASS6
ALCAM
SYT7
SLC26A1
SEC24A
FAAP24
CEP89
MRPL10
LRRC46
SLC39A9
NR4A1
ERH
PSMA5
METTL9
ZNF165
EFCAB10
TPRKB
DNPEP
PAH
IGSF5
SRI
SLC11A2
SERP1
GPR107
EIF2A
PSMF1
NDUFA4
PPIL2
OCEL1
HLF
VPS29
SLC20A1
RAD9B
MYCL
EPO
ANKRD2
TET3
SLCO4A1
SLC25A42
MARCHF11
TBCC
MNX1
ESYT3
BICRAL
RGS3
YEATS4
B3GNT3
ZBTB42
SLC39A3
IST1
CHFR
LRRFIP2
DTX2
ABL1
TMED2
PKM
ASIC3
SMYD3
PLEC
IMPA1
EIF2D
ZBTB38
TVP23B
CCAR2
C8orf58
STAT6
POU5F1
ENSA
TBL3
RNF151
GDAP1
UPK3BL2
STYXL1
SPECC1
CASZ1
AHRR
SLC35E2A
MCM7
MACROD1
AP4M1
CSRNP2
VEPH1
SLBP
MICOS10-NBL1
MICOS10
GNAI3
CLCC1
SLC12A9
SERINC4
RPL22L1
HYPK
HNRNPC
BTG1
TOM1L1
TCEA2
SMIM5