ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323403 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◢ SRX323402: MCF-7

◣ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
CNOT3
ADNP
COL23A1
TRIM3
MTRNR2L8
FRG2
POLR3B
REXO4
ADAMTS13
PLCB4
STMN3
RTEL1
PSMD6
RTBDN
MAST1
ZNF609
MTRNR2L2
MSH3
DHFR
MOB4
CYRIB
C9orf152
STX16
CCDC59
EXOC2
MZB1
SLC23A1
CUEDC1
NOL11
MRPL44
ERGIC1
OPRL1
LKAAEAR1
GNPNAT1
TRIM37
MADD
NOTCH2
SKA2
PRR11
NACA2
MTRNR2L1
TLNRD1
ARL14EP
GTPBP6
BRIP1
MAMDC2
INKA2
DDX20
NOTCH2NLC
BMP7
RGPD2
RGPD1
ZNF217
MED23
HIPK1
TUBD1
RPS6KB1
KMT2A
SULF2
PMVK
DPY19L4
FRG2C
PCCA
SPRYD3
NCOA3
SCAMP1
SECISBP2
EIF2S1
ATP6V1D
AP3S2
RBSN
APPBP2
DUX4
NDUFS3
KBTBD4
TANC2
ZNF165
GABPB1
SEC22B
ATP5MC2
EIF4B
OTUD7B
CLTC
CSDE1
FAM221A
SNAP29
PI4KA
PARD6B
C3orf14
MMADHC
TEX14
RAD51C
DCLRE1B
AP4B1
RNF6
S100A16
MARCHF7
BAZ2A
BLOC1S5
BCAS4
USP32
FAM227B
DTWD1
PPM1D
BCAS3
ECT2
KANSL3
FER1L5
REPS1
SMIM14
RAB1B
VPS13B
ATAD2
NOTCH2NLB
UCHL5
RO60
PFDN4
RPS7
SIKE1
MRPL21
IGHMBP2
DMXL2
TRIM33
PPM1E
PMEPA1
ARHGAP40
MYADM
RHOH
AFF4
MUC5B
KRT18
PMPCB
DNAJC10
PTPRN2
NPAS4
GRK6
KMT5A
KIF26A
N4BP3
PGK1
ETFA
ZG16B
BCAS2
RABGEF1
VMP1
PTRH2
TPD52L2
ABHD16B
TTC39A
IQANK1
FAM83H
FAM110C
SIRT4
ALG8
CRNKL1
CFAP61
RPS6KB2
WDR93
PEX11A
HSFX3
C6orf89
KMT2C
ZNF408
ARHGAP1
NSUN5
TMEM87B
EEF2K
GSE1
GGPS1
ARID4B
ZNF106
SNAP23
HSFX4
TMEM199
POLDIP2
PCYT1A
PPM1H
ARG2
CPLX2
CALHM4
SNRPB
HTR5A
LEMD2
BCAS1
MTFR1L
ERN2
PLEKHG2
ID1
TRIB3
IQSEC3
IPPK
MFSD4A
WDR74
SLC45A4
REXO5
ERI2
MUC2
EGR1
ZNF500
SEC16A
C9orf163
PAQR4
KREMEN2
PRODH
LOC102724788
MED26
TGFB3
RACK1
ZC3H10
RPL41
FBXO46
ZDHHC1
TMEM210
LRRC26
MKRN1
DGKZ
ADARB1
FLNA
CCPG1
C15orf65
SPOP
CIAO3
GSK3B
TRMT12
TBX2
PPP4R3A
ECH1
DHTKD1
MXRA8
ARHGAP39
ST6GALNAC1
METTL3
HNRNPA2B1
CBX3
MICA
MTMR12
TOP3A
SMCR8
TECPR1
EDN1
SLC35A1
NR1H3
ACP2
SPO11
FFAR2
HSH2D
FAM20B
DDX59
RPS26
BCL3
ZMYND8
H4C8
CYREN
SGPP1
FOSL1
CAP1
TXNDC11
PPP1R11
SNRPB2
KLC1
TACO1
SLC25A40
DBF4
USP9X
NOXA1
INSM2
CCDC174
TRIB1
SCNM1
LYSMD1
LUC7L2
ZBED8
RPEL1
ZNF446
TMEM251
MOAP1
TNS4
EIF1AD
BANF1
DMTF1
UBE3C
RALGDS
DEDD
ZNF655
SLC39A1
CREB3L4
SPTBN4
SMG8
BLVRB
NRAS
CYP2J2
ARID3B
WDR11
KAZALD1
IDH3A
IER3
FLOT1
FKBP4
SLC25A36
TMEM183A
FAM24A
DGKA
CRACR2A
CEP63
ANAPC13
UTP25
FLYWCH2
DEF6
SNRPA
C19orf54
ZNF860
OSBPL10
CPOX
CST3
TEP1
NBPF1
NQO1
MECR
TMEM95
KCTD11
DPF1
SYNGR2
SLIRP
ALKBH1
PRORP
PPP2R3C
CARMIL1
UBA1
SRMS
CKS2
ARID4A
RRM2
PERM1
ZKSCAN2
LIN54
RAPGEF6
TPK1
HES1
NAB2
DUSP6
UBC
TFF1
MLPH
ARPP19
GREB1
DYNC1LI1
ZNF681
RPSAP58
BAIAP2
CYB5R4
PSMB7
LDAH
RNF139
NCBP2AS2
NCBP2
HIVEP3
RPL32
ZFP62
DHX8
DPM2
CCNL1
ANAPC15
MICALL2
BARHL1
VPS26C
COMT
SCARB2
FAM47E
DHRS3
SH3YL1
ACP1
SUMO3
MYBPC3
RBBP8NL
ESR1
HDAC11
ADPRHL1
LRRC31
HCAR1
SAPCD2
ANO7
RHOBTB2
ARFGEF2
GNAQ
TSPAN13
HMG20B
NKX1-1
DDX42
CCDC47
USP38
HEATR6
AKAP1
PTPN1
MRPS11
MRPL46
PNKD
SCYL3
PHF14
NUCKS1
SMS
RBBP5
LHPP
PABPC1L2B
REM2
TPD52L1
PRR7
IFRD1
AP3B1
CD59
CHD4
LLGL2
ING4
FAM107B
SLC25A24
RPL35A
IQCG
ODC1
ALDH3B2
NECTIN1
CHD8
RARA
FAM207A
UGT2B15
ALG10
FNBP4
FANCF
CST4
TMEM30B
PDE4D
RBM19
CYP4V2
CNBP
PLEKHF2
MTOR
ADCY4
PPIH
METTL2A
GFPT1
CAPN8
EHMT1
PDE8A
OSER1
EMB
ZNF335
CRYM
PRKAG2
THAP6
POLR3F
DZANK1
CYBC1
ALG10B
AHSG
GORAB
EXD2
CANT1
TPCN1
HSF1
BOP1
DIDO1
WASHC5
NSMCE2
KCNH7
ISG20
FAM83A
AMBRA1
TXNRD1
TBC1D15
SYT5
SPIN1
GTF2H2C
NME1-NME2
NME1
MRPS23
RAB15
GTF2H2C_2
CHD2
ZBTB7B
TFF3
TAOK3
SUDS3
SFXN2
ARL3
RNFT1
USE1
AHCYL1
RASAL1
STK4
ZHX1-C8orf76
ZHX1
GTF2H2
UST
SLX4IP
MKKS
TUBG1
SLC1A5
RGS9
RETREG3
SLC34A3
RNF224
SLC24A1
NXNL2
INTS14
CSTF1
AURKA
PPP2R5E
VPS37C
CSRP1
TUFT1
LRP6
GPAA1
EXOSC4
OSBPL7
RAC3
TBC1D30
ZBTB8OS
TNRC18
RBBP4
POLR2J3
KIF5C
GOLGA1
PDE11A
NPDC1
HDGFL3
USPL1
RAB3D
HMGB1
GABPB2
WDR97
MAF1
CCDC9
RUVBL1
NOTCH2NLA
SPRED2
GSN
ZNF398
TEX22
PPIP5K2
GIN1
PROSER1
NHLRC3
MX2
MEF2A
ZNF576
SLC13A2
IRGQ
EIF3D
RNF223
SCIMP
PPM1A
ESCO1
ZNF2
DDX23
TOR1AIP2
TOR1AIP1
LYRM1
DCUN1D3
SNRPD2
QPCTL
CCDC149
MRPS33
BANP
AP4E1
ANKS6
PNPLA7
MRPL41
VPS11
EPN3
ZFHX2
THTPA
CTCF
INTS2
BPNT2
UCKL1
TRIM59
MIER1
TSKU
PPIP5K1
DHX40
CKMT1B
PSMC5
HELB
FTSJ3
AADAC
TTC6
FOXA1
YIF1A
TMEM151A
SLC16A5
NFKBIZ
NEUROD4
NDUFB6
SUSD2
LINGO1
HLTF
USP31
TFIP11
GSTP1
RUSC1
MON1B
SPHK2
RPL18
FAM83E
DEXI
CLEC16A
IPO11
FTH1
UEVLD
TEN1
ACOX1
ACY1
RAB7A
HARS2
HARS1
GRHL2
SLC33A1
SLC51B
MISP3
TMTC3
CEP290
FURIN
CCDC97
CXXC5
TMEM205
COX16
CCDC159
BCL2L13
SMIM6
GSPT1
ASB2
ZNF44
UMAD1
JUND
CAP2
WDR55
PRKAB2
CHD1L
GGCT
DSTYK
TOB1
CIB3
VPS33A
DSTN
BFSP1
GATAD2B
SEPTIN9
RMDN2
PLEKHN1
EIF4A2
NPM1
LNPEP
EFHC1
CALM1
CSNK1A1
YWHAZ
HYAL1
RMND1
ARMT1
KRT8
RPL12
PKP2
LRSAM1
UBALD1
BICD2
GTF2A1
GOLGB1
TMBIM6
KIF21A
TNFAIP1
MRPS30
IFT20
GRHL1
GJC3
MAB21L4
ABCF3
HHATL
SULT1A4
SULT1A3
BOLA2
GRPEL2
RGL2
NUDCD3
VMAC
NDUFA11
CLK3
LAD1
UFL1
TRIP4
SSBP2
NTMT1
CD55
PDE12
LPIN1
KLHL12
ATXN2
TSC22D1
TMEM107
XKR7
TBPL1
RTF2
UBE2K
MRPL1
CST1
CDK5RAP2
PRSS41
PDS5A
GSTA4
ACOT7
TJP2
LFNG
RPS27
RAB13
SNAPC5
CEP128
ZNF277
RNF130
PRKCZ
EPPK1
DOCK4
ZNF564
MFSD4B
USP4
MRPL33
EBAG9
MKRN2OS
MKRN2
UNK
NMRAL1
HMOX2
ITGB4
ANKRD17
ZFP36
NME6
EEF1AKNMT
CPNE8
ATP5MPL
SGO1
FAM222A
RAET1L
PTPN6
FBXW2
C12orf57
PPP6R1
PDAP1
CAPNS1
BUD31
AGR3
HERPUD1
ARL2
ADAM20
TDRD7
NPW
SRP72
SLC25A32
DDX50
DCAF13
ARL8B
GTF3A
EEF2KMT
ADAM8
WDHD1
SOCS4
TSC2
RBM45
NTHL1
CKMT1A
CALML5
SCRIB
RGMB
P4HB
DLGAP3
LSG1
CYSRT1
TPD52
TAB3
MACROH2A1
IPO4
BOLA2-SMG1P6
UNC45A
HDDC3
ZNF410
SNX1
CIAO2A
CHRM4
MATN3
KRIT1
ANKIB1
FMN1
EYA3
SLC44A2
PRR15
CDH26
ZDHHC12
SWSAP1
SMNDC1
CAPZB
ZNF197
AKIRIN2
PCTP
PALLD
LRCH4
FBXO24
CD63
TSNARE1
DIO1
SF3A3
ATR
ANKRD13D
NEK5
KCNB1
TMEM94
SEC13
TCAF1
SNAP25
RBFOX3
HOMEZ
HM13
CSF3R
ST20-MTHFS
COMMD1
CCT4
ZNF518A
KRR1
HIBCH
ZNF367
H2BC4
H2AC6
GTSE1
ALG13
SMIM35
SGO2
RPS11
EPHX1
CTSZ
SYVN1
PIP5K1A
PPP1R3E
BCL2L2-PABPN1
BCL2L2
SGK3
RPL37
PARP2
MON2
TSEN54
LRRC6
CASKIN2
CD82
TPH2
RCAN1
LMAN1L
LDB3
C8orf76
RNF24
PPP5D1
LIN28A
CALM3
INTS12
GSTCD
RRBP1
MAZ
DDX46
TMEM222
TIPRL
RABEP1
FOXJ3
CCDC22
CACNA1F
NTAN1
RASEF
GAPVD1
UBR7
RAC1
GON7
C19orf67
ARNT
SERPIND1
SRFBP1
GCN1
TNPO2
SASS6
ALCAM
SYT7
SLC26A1
SEC24A
FAAP24
CEP89
MRPL10
LRRC46
SLC39A9
NR4A1
ERH
PSMA5
METTL9
EFCAB10
TPRKB
DNPEP
PAH
IGSF5
SRI
SLC11A2
SERP1
GPR107
EIF2A
PSMF1
NDUFA4
PPIL2
OCEL1
HLF
VPS29
SLC20A1
RAD9B
MYCL
EPO
ANKRD2
TET3
SLCO4A1
SLC25A42
MARCHF11
TBCC
MNX1
ESYT3
BICRAL
RGS3
YEATS4
B3GNT3
ZBTB42
SLC39A3
IST1
CHFR
LRRFIP2
DTX2
ABL1
TMED2
SETD9
PKM
ASIC3
SMYD3
PLEC
IMPA1
EIF2D
ZBTB38
TVP23B
H2BC21
H2AC21
H2AC20
CCAR2
C8orf58
STAT6
POU5F1
H3-3B
ENSA
TBL3
RNF151
GDAP1
UPK3BL2
TOP3B
STYXL1
SPECC1
PLA2G15
CASZ1
AHRR
SLC35E2A
MCM7
MACROD1
AP4M1
CSRNP2
VEPH1
SLBP
MICOS10-NBL1
MICOS10
GNAI3
CLCC1
SLC12A9
SERINC4
RPL22L1
HYPK
HNRNPC
BTG1
TOM1L1
TCEA2
SMIM5
PPP1R14D
ATG9B
ABCB8
FOS
ZC3HC1
SETD5
GNG13
CD2BP2
UBL7
THUMPD3
EDARADD
USP7
SVIL
CTTN
TMEM9
SLC35B1
PACS2
COX14