ChIP-Atlas: Target genes

Potential target genes for NKRF

Query protein: NKRF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3322834 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKRF's Target genes

◢ NKRF: Average

◢ SRX3322833: GM12878

◣ SRX3322834: GM12878

◢ SRX2423793: K-562

◢ SRX2423794: K-562

◢ SRX9739052: MDA-MB-231

◢ SRX9739054: MDA-MB-231

◢ SRX9739056: MDA-MB-231

◢ SRX9739058: MDA-MB-231

◢ NKRF: STRING

NPAS4
SRGAP2C
FAM72B
NUF2
FBXO5
DUX4
SHC1
FLAD1
CKS1B
TICRR
MTFR2
SRGAP2
FAM72A
BIRC5
CCNA2
SGO1
TROAP
CCNG2
DZIP3
CIP2A
RRM2
ESCO2
FAM72C
TRMT1
NACC1
RAD54L
NCAPH
ITPRIPL1
TRIP13
BRD9
NUDT15
KIF20A
BRD8
SKA1
CCNB1
UTP20
CCNB2
CDC25A
SRGAP2B
FAM72D
FAM111A
ZNF331
PRCP
DDIAS
CDC6
UBE2C
MCM10
NEK2
STIL
KIAA0895
ANLN
MIS18A
CRNKL1
CFAP61
WDR62
THAP8
MND1
TTC24
IQGAP3
RAD51
BLM
CEP135
TMEM262
ZFPL1
CDCA5
SNRPD2
QPCTL
FANCI
AURKB
PLK4
DLGAP5
POLQ
QTRT1
SHCBP1
SMC2
SKA3
MRPL57
ELOVL1
CDC20
CDK1
MAD2L1
VPS35
CENPM
UNG
ALKBH2
RRP12
GTSE1
EXO1
RFC3
CKAP2L
NEIL3
FANCD2
POU2F1
KRI1
CDKN2D
CEP55
CAMTA2
KIF1C
INCA1
KLF1
GCDH
DNASE2
SPCS1
GLT8D1
MTRNR2L1
GGH
PBK
XRCC2
CENPS-CORT
CENPS
KIF2C
MKI67
NEMP1
BUB1B
HROB
TRAIP
KIFC1
NUDT2
KIF24
TTC27
METTL1
EEF1AKMT3
CYP27B1
LZTFL1
C16orf71
ANKS3
BRCA1
DEPDC1
KIF15
KIAA1143
CEP43
KIF18B
SASS6
ZGRF1
LARP7
HMGB2
OIP5
NUSAP1
TTK
INTS7
DTL
TEDC1
CRIP1
CCDC150
SH3GL1
CHAF1A
MCM7
AP4M1
SMC4
IFT80
FKBP1A
FAM53C
CDC25C
TONSL
FKBP3
FANCM
RECQL4
MFSD3
LRRC14
LRRC24
KNL1
RABL2A
REXO5
ERI2
DNA2
ZNF358
MCOLN1
ASPM
ARHGAP11A-SCG5
ARHGAP11A
SGO2
MYBL2
SPC24
FAM161A
CCDC86
HASPIN
NOL8
CENPP
DIAPH3
PCNT
C21orf58
HMGB1
FRAT2
EDC3
PRPF38A
ORC1
ZNF688
TIMELESS
MIP
KIF11
PMS2
AIMP2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
KCNJ14
GRWD1
H4C2
H3C2
H2AC4
PPIH
KLHL18
KIF9
RABL2B
MARCHF8
FAM200B
MRPL27
EME1
NOL6
GNG14
FBXW9
CRLF3
ATAD5
RAD18
POLR2K
FBXO43
TMED5
CCDC18
CDK7
POC1A
HJURP
CENPH
VRK1
ZGLP1
FDX2
TMEM129
TACC3
SLBP
DYRK1B
CENPW
NCAPG
SUMF1
ZAR1L
BRCA2
ACTR6
TIAL1
ASF1B
KPNA2
E2F3
PARPBP
NUP37
DERL3
FRG2C
TRMT61A
CKB
CENPE
SECISBP2
CKS2
SWSAP1
CSTF1
AURKA
DBF4B
MAP3K7
SHQ1
MOK
RAD51AP1
C12orf4
PLK1
SCFD2
INKA2
DDX20
GLRX5
RBM19
DNAH7
SKA2
PRR11
DOLPP1
UFD1
CDC45
AUNIP
CLSPN
FPGS
CPEB4
DSCC1
RCCD1
TRIM37
C2orf69
TRIP12
FBXO36
SPC25
WDR90
PUM3
MRPS16
DNAJC9
RPUSD1
CHTF18
PPP1R16A
FOXH1
TRAPPC6A
BLOC1S3
H3C8
H2BC10
IREB2
PPIL4
SMYD5
DDX21
KCNAB2
NDC80
METTL4
FAM174C
CIRBP
UTP25
SF3A1
CCDC157
PPIL3
NIF3L1
CENPF
RAD9A
PPP1CA
MELK
CDIN1
ACOX3
INAFM2
WASHC2A
S1PR4
NCLN
PDSS1
CFAP54
ZNF778
INPP5K
ZSWIM9
LIG1
LRP8
TM9SF1
IPO4
RRS1
ADHFE1
PEX19
ULK4
ADCK1
PKMYT1
TDP1
EFCAB11
IPMK
CISD1
FAM83D
WDR81
TLCD2
RTN4RL1
DPH1
AGFG2
CMC2
CENPN
RNF166
CTU2
ZNF594
PSME3
BECN1
POLR2J3
TMEM230
PCNA
CDS2
METTL15
KIF18A
TTF2
UBXN11
SPNS1
LAT
MRM1
DHRS11
HAGH
FAHD1
ZSWIM1
SPATA25
NEURL2
CTSA
FAM24B
GATB
KCTD9
CDCA2
CGGBP1
C3orf38
FAM76A
CCDC146
SLC35B2
HSP90AB1
DCAF4
GPN2
GPATCH3
RNF40
CCDC189
NEU1
VARS1
TCF19
POU5F1
CCHCR1
MTRNR2L2
MSH3
DHFR
WDR46
RGL2
PFDN6
NUP107
TPX2
RMI2
NAXE
GPATCH4
PNO1
CCT2
ZNF497
A1BG
SNIP1
DNALI1
TOM1L2
DRC3
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
FRAT1
DHX37
BRI3BP
DIP2A
WDR4
LTV1
OGDH
ZNF530
RECQL
GOLT1B
RNASEH2A
PRDX2
REEP4
DUT
SP4
UBL7
UNKL
LIM2
CDCA8
C1orf109
DHX33
DYNC2I1
ECSIT
CNN1
STAT1
TTC16
PTRH1
CFAP157
RHEBL1
KMT2D
E2F1
PCOTH
MIPEP
C1QTNF9B
TEKT2
ADPRS
ZNF724
RAD54B
CLCN7
TFIP11
CORO1A
TRMT5
SLC38A6
RANGAP1
NOP16
HIGD2A
URB2
TAF5L
ATAD2
CEP128
KDM5B
DYNLL1
TAF13
TRMO
BIN3
DDX42
CCDC47
MMUT
CENPQ
TEDC2
PHB2
PACRGL
UFSP2
C4orf47
C1orf159
NEK10
C1QBP
PAQR4
KREMEN2
RDH5
ITGA7
BLOC1S1
AXDND1
WDR74
STX5
C19orf48
ZNF785
IQCE
BRAT1
NAT10
NBR1
PIGU
AEN
KIF14
LENG1
TSR3
GNPTG
SLC26A1
IDUA
KAT2B
KIF23
LSG1
REEP6
PCSK4
ATP6V0D1
AGRP
NOM1
KLF16
PIAS1
TRMT6
MCM8
C16orf46
PBRM1
GNL3
LIN54
PNPT1
SRM
GTF3A
FARSA
CALR
RAD23A
NET1
TUBAL3
SPATA33
UNC45B
NLE1
C12orf45
CARS1
RPP40
ODF2
CYB561D1
ATXN7L2
SLC7A5
EBNA1BP2
CFAP57
RPUSD4
FAM118B
HCFC2
GLT8D2
SHOX2
RSRC1
ASH2L
SLF1
KIAA0825
BUB1
RPSA
CFAP43
PPID
EXD1
CHP1
COMMD4
MYBBP1A
GGT6
NEK4
ITIH1
ZNF888
C5orf34
NME1-NME2
NME1
CFAP53
KNOP1
IQCK
ANKRD42
PRR22
DUS3L
THOC3
MRPS15
IMP4
CCDC115
PPRC1
UBIAD1
WRN
PURG
POC5
HEXA
ZWINT
TAF5
DCK
METTL18
C1orf112
COP1
SUPV3L1
BBS12
NUMA1
LRTOMT
FAAP24
CEP89
TMEM186
PMM2
SLC43A2
DDX19A
LIN9
ERI3
ZNF367
CDC23
TOP2A
NUDCD2
HMMR
PRKAR1B
TPRA1
MCM2
CENPA
FNTB
VPS53
PXMP2
POLE
PEPD
UBE2T
PPP1R12B
RRP15
STMN3
RTEL1
ZNF680
TTLL5
ERG28
FBXL20
MALT1
RAB24
PRELID1
MXD3
RER1
MORN1
PRR5L
COMMD9
NDUFAF6
CCNE2
ATR
TWNK
MRPL43
LZTS2
NAGPA
RPAIN
NUP88
PPIG
GINS4
MIS18BP1
TBRG4
WASHC2C
TMEM231
RFK
GABARAPL2
FZR1
DOHH
MRTO4
EMC1
RUVBL1
RNMT
FAM210A
CFAP69
NOC4L
DDX51
AARS2
CCDC77
PAK1IP1
C6orf52
VPS33A
EXOSC5
BCKDHA
POLR3D
SETD4
CBR1
ATIC
VAC14
PCNP
LOC101928764
C17orf97
RNF220
ZNF66
MARS2
NCL
TMED8
SAMD15
CFAP410
INO80
AP5Z1
SLC12A9
UGGT1
TTF1
CFAP77
AAAS
ZNF687
TIMM21
FBXO15
SNAPC4
THADA
TFB2M
CNST
LSM5
AVL9
FAM161B
COQ6
RCC1
USP2
HTR5A
NUP35
KAZALD1
FAM174A
ZNF92
LYRM4
FARS2
SLC25A10
MRPL12
UBE2G2
PIP4P1
OSGEP
APEX1
RFC5
CCDC28A
LOC102724770
DGCR6
CDC37
POLL
DPCD
WDR73
NMB
APTX
IFT57
DNAJA1
C12orf66
NSUN6
ARL5B
MUL1
LOC390877
GTF2F1
SLC37A1
RSPH1
ZWILCH
SNAPC5
RPL4
NAA25
NOL12
SSNA1
ANAPC2
MZF1
AP3D1
CALCOCO1
SNX15
ETFDH
C4orf46
POLD2
TMEM120B
SPATA5
NUDT6
PPP1R7
PASK
H3C3
H2BC3
BCAS3
MPDU1
LOC100996842
EIF4A1
CD68
ESPL1
SLC25A46
FANCC
DDX49
COPE
POLR1B
BNIP3L
TOM1
MMS22L
TMEM192
CELSR3
RHBDD2
CCDC34
ATG5
TMEM258
FEN1
GPD1
COX14
BBS1
OSCP1
URB1
TCTEX1D4
PLK3
BTBD19
TCTN1
RNASEH2C
KAT5
DCLRE1B
AP4B1
H4C7
H3C7
H2BC9
TPRKB
VCP
FANCG
TSPO
MCAT
NHP2
EXOSC6
RTBDN
MAST1
PSMC3IP
CNNM2
YEATS4
MFSD1
RAC3
DCXR
PYCR3
GFUS
ZFYVE1
KIF22
HSPA9
TCTN2
GTF3C4
DDX31
TRIP4
PCLAF
FANCF
PIF1
PDE12
TRUB2
COQ4
TIMM44
HBP1
FIGNL1
PACSIN3
ARFGAP2
TPRG1L
SIRT3
PSMD13
PALB2
DCTN5
RPS29
ZBTB9
SLC25A26
DDX47
MRE11
ANKRD49
BRIX1
LRR1
USP19
ZNF273
TPRN
TMEM203
NDOR1
TAF4B
ANAPC7
WASHC5
NSMCE2
MYO9B
HAUS8
RPL6
PTPN11
LMNB2
TMEM9B
PPWD1
CENPK
NXF1
CCDC107
ARHGEF39
CA9
MIS12
DERL2
MED20
BYSL
EIF3CL
EIF3C
LARP4
FAM186A
ING2
ZNF808
PNRC2
MDN1
CASP8AP2
RPIA
MRPL24
PSMD3
CBWD5
LMTK2
HSPBP1
BRSK1
NME2
UTP15
ANKRA2
SLC39A6
TTC31
CCDC142
WIPI1
GADD45GIP1
TERT
EPB41L5
IARS1
PFAS
CHEK1
NCAPD2
MRPL51
WFIKKN1
METTL26
DPP3
SDAD1
NARS2
MPHOSPH10
MCEE
GBA
CDT1
APRT
TXNDC17
KIAA0753
SLC35A5
ATG3
DHDDS
FARSB
SUV39H2
TTLL11
CSNK1G1
TK1
RPL27A
MRPS18B
ATAT1
SLC35C2
INTS8
CLPB
MRNIP
BMPR2
SNRPE
RRP9
PARP3
MON1A
MRPL3
LMLN
IQCG
TRIT1
RPL35A
RPL22
RNF207
MAK16
CMSS1
PPAT
PAICS
DHX40
ABCB6
PPIL2
TIGD2
RMC1
SMC6
GEN1
ZCCHC3
C20orf96
GMNN
ZNF557
NGRN
NOL7
RBM28
RGS20
ATP6V1H
ZNF85
UBN2
NOP2
NUDT1
MRM2
MAD1L1
RACGAP1
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
SPPL2B
LSM7
TTLL4
POLN
HAUS3
C6orf226
SNX25
CFAP97
RPS19
PINX1
ENDOV
EFCAB6
SURF4
COG7
IQCH
AAGAB
UROD
HECTD3
IGF2BP3
DDX19B
AARS1
CCS
CCDC87
TP53INP1
ARFGAP3
FBXL3
THBS3
MTX1
C10orf143
DEPDC1B
ETF1
PRKDC
MCM4
ABHD17A
TOMM40