ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX360007 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◢ SRX10477188: Hep G2

◣ SRX360007: LoVo

◢ HOXD1: STRING

RGPD2
RGPD1
MTRNR2L8
MTRNR2L2
NPAS4
XKR7
IQSEC3
ING3
DEPP1
NRL
DCAF11
HTR5A
CELSR3
GLRA1
L1CAM
CPLX2
RAB37
SH2D3C
EPHA10
BARHL1
TBC1D10B
MYLPF
SCRT1
CHGB
OTX1
MAPK8IP2
RANBP3
IL11RA
RIN2
SNAP25
LHFPL5
ITGB1BP1
CPSF3
STX16
OPA3
UNC80
VGF
SCRT2
HES3
ZNF670
HPCA
KCNH6
SST
SRRM3
KCNK12
GRM1
ANK1
OGDHL
MMP24
CHRNB2
CCDC92B
SH3BGRL2
PLEKHM3
NPPB
CYB5R4
PCNA
NTSR2
MRPL44
INTS12
GSTCD
SLC7A6OS
PTPRN
PRMT7
STMN3
PPP3CA
SLC45A4
WDR74
NDUFAF5
ESF1
GCFC2
TMEM242
IPO4
CDK5RAP1
PSMF1
H4C12
GTF3C3
METTL9
DNAJC6
ABCC6
MRPL39
SLC39A3
SLC12A5
SCGN
PIH1D1
EXT1
RBM28
USPL1
HMGB1
CHRM4
AAR2
SCFD1
MTF2
RPS7
MED23
RANBP2
RAD54L2
COPS7B
DCP1A
MARCHF4
SEZ6
PTGDR2
NUF2
NME1-NME2
NME1
LEMD3
SP2
PGBD5
TRIP4
MFF
PRMT5
FAM227B
DTWD1
PET117
KAT14
CDIP1
CWC25
MITD1
TMEM181
TIGD1
EIF4E2
DDX1
TM9SF1
SLC35A3
PDE4C
HDAC2
MAP1LC3B
FBXO31
DTD2
PEX3
ADAT2
SF3A3
DPY19L4
KLF11
RABGGTA
COMMD1
CCT4
STX18
IRF9
SAR1B
KANSL3
VWC2L
MOB4
SLC25A21
NSFL1C
HEATR5A
TSPAN10
PHF3
NPLOC4
HBQ1
KDM3A
CCDC88A
WTAP
SOD2
LRRC37A3
NOL7
DUS1L
FOXJ3
SNAP47
JMJD4
CCNC
RFC1
USP14
PMS2
NOC3L
AIMP2
CPPED1
LRRC59
SLC30A6
CCNL1
CALM1
KATNA1
PGRMC2
NHLRC1
TRMT61B
POLR3E
SNRPB2
TANK
TACO1
SEZ6L2
GRIA2
ASPHD1
UBE2Q1
MRPL58
PTPRS
AP3S2
XRN2
COPS8
PKP4
IKZF3
APOB
TMEM222
MRPL40
HSPE1-MOB4
HSPE1
HSPD1
HIRA
CLVS1
ANKRD36
CNPY3
TMEM186
PMM2
EXOC2
ACTL6B
RSPH3
MTIF2
WASHC2C
LAMP1
PRR13
FRA10AC1
PIK3R3
HDAC4
TPH2
ZNFX1
DRG2
STAT3
RTF2
NDUFAF1
GPR158
EPM2A
BICDL1
SF3B6
FAM228B
AKAIN1
PSMD3
USP30
CHGA
GRM2
TSEN54
SNRPC
CASKIN2
ZNF165
RBL1
H4C3
TEFM
SEC23A
ZNF23
PPP4R3B
LTV1
SRSF2
NDUFS3
MFSD11
KBTBD4
SLC44A1
NDUFA12
FUS
PTP4A2
TMEM41A
TUBGCP3
NCOA5
NUS1
AIP
AATF
MDP1
CTNNB1
POLDIP3
EVI5
SNRPB
PDE1C
STK4
CCDC59
ZFYVE27
TSN
TMEM230
ABCA3
WDR36
OPA1
TOB1
HECTD1
NEURL2
MRPS31
HS3ST2
CTSA
TTI2
ODC1
NFAT5
NET1
RPTOR
PREPL
CAMKMT
TBC1D19
TRMT6
SVOP
RNF130
MCM8
ATIC
TBCD
SMG8
RGMB
MRPL21
IGHMBP2
SYP
GORASP2
PRKDC
MCM4
MRM3
GOT2
GLOD4
DUS2
DDX28
MRPL3
STK25
RTEL1
NXF1
EFTUD2
CCDC103
ZNF473
VRK3
CSTF1
AURKA
EXOSC6
TRAF6
RAG1
NUP54
FAN1
ZNF451
PHF14
MRPL53
RRP1B
PRDX1
HSF2BP
HDDC2
SNRPD1
KIZ
ATP6V1B2
KIAA1958
DMAP1
DHRS4L2
C9orf147
ZBTB45
SCAMP5
TMEM106B
BRMS1L
PMVK
NDUFC2-KCTD14
NDUFC2
LONP2
H2BC17
H2AC17
ACSL3
ABCC11
ZNF292
THUMPD1
EBAG9
DCAF10
CALM2
ACIN1
NUP153
NDUFS7
KIAA1586
PALB2
DCTN5
ALG10B
MARCHF8
POLR2J3
MIA2
E2F3
DDX18
USP42
PTPN4
MAT2A
GEMIN2
CMTR2
XKR9
LDAH
LACTB2
FABP1
MMAA
GGA2
TRIB1
SRP54
RUVBL1
RPS6
RPL31
RFT1
EEFSEC
VTA1
NMBR
MRPS23
EIF2D
MTHFD1L
COQ9
CIAPIN1
CCT8
FAM207A
SPOP
GPCPD1
RMND1
POLR2C
HEXA
ARMT1
SPTSSA
NCOA3
GTF2H2C_2
FITM2
ZC3H6
PHF1
TTC4
KCTD5
FAM133B
PPP1R3C
UCHL5
RO60
FAM53C
CDC25C
PPIL4
NFKBIA
HMGA1
PSMD7
ITGB3BP
FANCL
EFCAB7
BMS1
ZER1
TCTE3
ERMARD
DHDDS
CRH
ZGPAT
OPRM1
NOC4L
H4C11
DDX51
ARFRP1
WDR43
HSP90AB1
HM13
ALG1
EDC4
CPNE9
TRIM67
TMEM101
PYURF
PIGY
HERC3
FN1
STRADA
SLBP
RBM45
PTDSS1
MTERF3
SOS1
SIRT4
RPS15A
GINS1
ERN1
AURKAIP1
ZBTB4
RBM12
POLR2A
CPNE1
RARS1
H4C15
H4C14
FAM98B
SGTA
RMND5A
DNAH14
CHEK1
CDKN2AIPNL
PUM2
HAAO
GDAP1L1
ADGRG6
THUMPD2
N6AMT1
ZC3H7A
XYLB
FZD5
TOX4
TMEM167B
RAB2B
NAA20
IDH3B
GTF2H2C
DHRS2
THAP4
PCK2
ATG4B
AP3B2
MAGOHB
INSIG2
EFCAB13
CERS6
TRDMT1
TOP3B
SLC37A4
LOC112694756
C16orf72
TRIAP1
TOMM22
ENO1
E2F6
C19orf53
C14orf119
ANO10
ABHD5
TOMM5
SLC25A10
RRN3
PIGU
EEF1AKMT4-ECE2
EEF1AKMT4
DNMT3A
ALG3
ZFP1
RTTN
RAB5IF
WDR35
TMEM14B
MAP2K2
ZNF337
H1-4
WDR45B
TMEM179
SNX17
KCNH4
G2E3
EIF2B4
CDCA7
TBL3
RPL27
MRPS5
COPS6
NID1
NFE2L2
NABP1
MRPS18C
HELQ
FAM177A1
C10orf88
TTPAL
CCT2
PIGL
FAAH
DNAJC24
DCDC1
CBWD2
AARS2
UBAP2
TVP23B
TRMT2A
RANBP1
PYGB
PSME3
LGR5
PPP5C
FGA
POLR3D
GJA10
TUBD1
TDP2
SLC24A1
RPS6KB1
INTS14
ACOT13
TTLL4
SYN1
SCG3
ID2
ERLEC1
ASB3
AKAP10
THNSL1
SPECC1
BCL2L11
ARL6IP1
ZMPSTE24
UTP4
SLC35F5
PPM1H
DSTYK
DERPC
COPS7A
CHTF8
BCL7B
TATDN3
SNX18
PNPT1
PMS1
PEDS1-UBE2V1
PEDS1
ORMDL1
NSL1
DDX19A
HNRNPD
ANAPC11
ALYREF
AGPS
YARS1
SRSF6
S100PBP
NUP62
LTBR
IL4I1
ATF5
TTI1
SNX5
RPRD1B
MGME1
KIF15
KIAA1143
CRNKL1
CFAP61
ANKRD36C
AASDH
ZSCAN30
NUP160
RUSF1
PUM3
FAM162A
CCDC58
WDFY1
SEC14L1
NBPF1
RBM18
NSG2
MRRF
KNOP1
H4C4
CCDC174
BIRC2
ASNSD1
ASDURF
POLE4
PLAG1
GZF1
EIF2B3
CHCHD7
APOA2
NUDT1
NOL10
MRM2
VPS25
TINF2
THOC3
POLR3G
P4HA1
MRPS15
MBLAC2
GTF2H2
GDAP1
FBXO4
EAPP
ZNF425
ZNF398
WASHC1
USP40
SSBP1
NCL
ZNF770
TF
MARCHF7
GOSR2
FAM163B
EPHX2
UNC50
TAMM41
SLC25A51
ENOSF1
COA5
TMEM248
TMEM169
PECR
MANBAL
LEAP2
G6PC3
COPS4
ACAD9
STAT1
RPL10A
RNF149
RNASEH1
MTHFD2
BIRC6
ANKAR
USP4
LAMTOR5
H4C5
POLR1H
PCF11
NSA2
NOP9
MC1R
GFM2
FEM1C
DHRS1
API5
CCN2
ARFGAP3
STOML2
SNF8
KIF16B
CCDC83
BIRC5
KRR1
CCDC107
TOB2
SLC25A13
RRP15
PRRC2B
GINS3
GEMIN7
ZNF461
POR
NGDN
MNAT1
MLLT1
MCAT
LATS1
ENTPD6
CENPA
ADAM17
TBC1D13
FAM161A
COX16
TRIM26
SLC38A2
SEC13
ROMO1
PARL
NFS1
CLUAP1
ATF2
ALG6
WDR70
TAB1
MMADHC
KRCC1
GMCL1
TIGD6
RPL12
MRPL16
LRSAM1
HMGXB3
H1-2
EEF1AKMT2
ABT1
NDUFA10
LRP6
ETV4
ZDHHC7
TSEN15
TAF5
TAF3
LRRC57
HAUS2
GLO1
DNAJC10
ATP5F1E
SRFBP1
KCTD18
EEF2K
CETN3
AGMAT
TIPARP
SUMF1
PNN
MTX2
EIF3B
ZC3H15
TRIM44
SRSF11
SAAL1
PRORP
PPP2R3C
EDEM2
AHCY
TTC30A
SPNS1
REX1BD
LDHA
ITPRID2
HAL
CNTRL
CLK1
C5
TRIM74
SMG1
SHQ1
SARAF
PCNX4
NMS
KHK
CEBPZ
STARD4
PDXDC1
CRLS1
ARFGEF2
USP34
TXNDC9
KPNA5
EIF5B
CLEC16A
SERPINB1
PUS10
PEX13
MKS1
HEXIM1
ERCC5
CNN3
C16orf46
ZNF8
SEC24A
ACY1
WFDC3
TRMT11
TOMM34
RDH14
PIKFYVE
MDM2
HEXB
H3-3B
DNTTIP1
COMMD2
CLCN7
AP3S1
ALKBH3
ABCF1
PCID2
FBXW2
CUL4A
ATP5MC2
TTC23L
NOCT
GTF3C6
DNAJC25-GNG10
DNAJC25
ARSB
TDRD7
PBK
KDM8
GPT2
CHPT1
USP31
UCKL1
RUNDC3A
R3HDM2
PCIF1
KRI1
CITED2
UQCC1
TMA16
SPAG16
IARS1
G3BP1
DIABLO
CTBS
TGOLN2
SMARCD2
RPL37
PRKRA
PJVK
LOC100287896
LIPT2
ATG16L1
ZNF721
TRAPPC6B
TMEM208
TDRKH
PPM1D
PPIP5K2
PIGG
MRPL33
LRRC29
GIN1
CEP295
BTG1
ATXN2L
VAMP4
NUBP1
HPS5
GTF2H1
CFL2
BBS1
ABCB6
TTC26
SUPT3H
SMIM8
SAYSD1
NFYC
GXYLT1
GDF15
DIDO1
CDC73
ARHGEF12
ZNF843
RPS15
MIPOL1
H4C2
DDX56
WDR11
THOC1
SULT1A1
PPARD
PAFAH2
NSRP1
ANKRD34C
ALKBH2
UGGT1
TRMU
PIGO
NUP107
LYSMD3
HUS1
ESCO1
CCDC57
CCDC43
C2orf42
ZSCAN9
VIRMA
RFXANK
NAT10
MRPL41
CUL7
BORCS8
SRSF5
SEC62
PXT1
NUDT4
MESP2
KCTD20
ASF1A
ACOX3
ZSCAN25
DIS3L2
CEP192
TEX10
SLC33A1
SEH1L
ORC4
MOGAT1
MBD5
DCP1B
CCAR2
USP37
SPTLC1
NAGK
GOPC
CNOT9
ANKHD1-EIF4EBP3
ANKHD1
PRRT1B
PRADC1
NPRL2
CYB561D2
CCT7
CASC3
ACYP2
ABCD4
VRK2
SUMF2
MPHOSPH6
MEMO1
LIMS1
ERLIN2
EPB41L4B
CUL9
COG7
CLN5
BLOC1S6
AP1G2
ZNF341
VARS2
TRIM33
PPP1CB
NRSN1
KIAA1841
FEM1B
C17orf75
ZSCAN12
ZNF354B
UTP3
TIMM22
STAU1
SNRNP35
KMT2D
HADHB
HADHA
EMC9
EIF3CL
EIF3C
DDX27
CBWD1
AMZ2
ZNF248
TUFM
TSFM
TRPC4AP
SH2B1
MED31
LUC7L
GPR78
EIF2B5
DHRS4
DBI
C2orf76
C17orf100
ATP7B
ARL14EP
ALG11