ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◣ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
MTRNR2L2
MTRNR2L8
SP2
TNFRSF19
ADAMTSL1
DNM2
EVI5L
H4C3
CLPB
UNK
FEM1A
H4C15
H4C14
H4C11
RFX1
DDX49
COPE
UCKL1
BOD1
KATNB1
PAFAH2
PHF12
IFRD2
RWDD1
CHMP4B
POLR3F
DZANK1
SP1
RBBP5
KHSRP
AP2S1
VPS50
HEPACAM2
FBXL19
CIC
PHB
CALCOCO1
TCEA2
RAB5B
SCNM1
LYSMD1
MMACHC
CCDC163
H4C2
SUCLG1
MRPL24
DDX23
H2BC4
IFTAP
HIKESHI
YJU2
SLX1B
SLX1A
BOLA2B
BOLA2
TEPSIN
NDUFAF8
TMEM115
SLC25A25
NAIF1
MAPKAPK5
ANKHD1-EIF4EBP3
ANKHD1
WDPCP
MDH1
BOLA2-SMG1P6
PAK1IP1
C6orf52
WDR74
PES1
DFFA
NEBL
THRAP3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCLN
TBL1X
PPP1R12B
ING4
GSPT1
CALR3
C19orf44
BANP
PRCC
TSN
H4C12
ZFYVE1
AURKAIP1
TSNAXIP1
RANBP10
RPS7
RPS20
VIPAS39
AHSA1
OSBP
TOM1L2
DRC3
PEMT
GALM
SMPD3
FAP
GTF2H4
C16orf91
TSC2
NTHL1
PPRC1
MTOR
LARS1
TMEM208
PNKD
LRRC29
AAMP
SYMPK
FOXA3
INTS9
HMBOX1
ELOC
RPL32
PNPLA6
ZNF225
RPS3
NUP205
NDUFS3
KBTBD4
C19orf53
ST3GAL2
SF3B6
FAM228B
CCAR2
INVS
ERP44
ZNF268
CCDC90B
HNRNPC
LRCH4
FBXO24
UBQLN4
LAMTOR2
ZNF547
TRAPPC2B
TSSC4
PRR14
ORMDL3
SCAF1
NUF2
BUB1B
SLC35B1
POLDIP3
SIRT4
COMMD1
CCT4
ZNF687
ZNF143
LSG1
SF3A3
RGPD2
RGPD1
SUPV3L1
HDAC9
C1orf159
FASTKD1
SLC35E2B
RANBP2
ZNF165
FAM168A
NUDCD1
PRRG2
NOSIP
ZNF17
PSMD11
CCDC146
DSTYK
GPR137
TACO1
NDC80
METTL4
H4C5
GPR108
UFD1
OAZ3
MRPL9
CDC45
TBL3
SNX17
EIF2B4
GBA
DYNC1I2
ZNF383
TMEM94
NPRL2
CYB561D2
SSR3
CRTC2
SPSB3
ZSCAN22
SUPT7L
SLC4A1AP
G3BP1
BMF
STAM
TFPT
PRPF31
PIN4
STT3A
CACTIN
GATB
SSBP1
SP5
UFSP2
SART3
ISCU
VCPIP1
C8orf44-SGK3
SCRIB
SIRT2
NFKBIB
ZNF140
CYCS
UBAC1
TSNAX
SNX16
ACTR1A
HRCT1
MICOS13
HSD11B1L
FARSB
STIP1
NLK
HEXIM2
RNASEH2A
AK2
FLAD1
NUP107
COMMD9
NR6A1
TIMM21
MTRNR2L9
FBXO15
TMEM60
PHTF2
VTI1B
COX16
DDX39B
CCDC174
ING3
ZNF235
THOC6
HCFC1R1
ALKBH7
KHDC4
LMAN2
WDR46
PFDN6
RPIA
ZNF417
SPHK2
RPL18
RAB11B
CNIH4
EHF
E2F4
PANK4
MRPL53
UBR2
ZNF335
ZC3H10
SEC61B
ALG2
ZNF444
POLR2E
TRDMT1
KRR1
REXO1
PIGL
ANAPC5
EFTUD2
CCDC103
H2AC6
SEC11C
RBM42
TRAF7
ZNF576
IRGQ
DDX41
KBTBD6
PNN
TMTC3
CEP290
CAND1
GOSR2
NMT1
DCAKD
MRPL21
IGHMBP2
SMG8
METTL3
STX16
ISY1-RAB43
ISY1
NUCB1
LIN37
EIF3F
SRSF11
LRRC40
C19orf48
INTS1
NDUFS7
MED27
AHCYL2
NME1-NME2
NME1
ZBTB45
SLX4IP
TTI2
PWWP2A
TMEM242
ZSWIM3
ACOT8
RNF121
LOC100133315
ZFYVE19
DNAJC17
DCAF7
UTP11
UBE2I
HNRNPL
CDK5RAP2
EIF2AK3
CCP110
ZFPL1
CDCA5
SLC8A1
TATDN3
NSL1
COX7C
NUDT13
NFIB
TBC1D10B
RPL27
PSMB6
MYLPF
TCERG1
MTRNR2L10
ATP5F1B
GSK3A
ZMAT2
H4C8
GTF3C3
VWA5A
RPS27A
IPO13
CLHC1
PHB2
BUB3
NEDD8-MDP1
NEDD8
GMPR2
GET3
SUFU
SUDS3
PCBP1
KRT15
CLN3
RPS6KB2
EXOSC5
BCKDHA
MRPS7
GGA3
ZNF337
SUGP1
MAU2
C12orf43
MRPL28
SEL1L
PPP5D1
CALM3
BABAM1
RPL35A
JOSD2
IQCG
HNRNPUL1
ZNF384
SHPK
CTNS
CAPN15
NOC4L
NDUFAF5
ESF1
DDX51
NDUFB5
MRPL47
C1orf109
CTDP1
ZNF691
MITD1
RHOT2
KMT2B
ZNF500
RPL9
LIAS
CTU1
ZNF776
EXOC4
STK36
RNF25
RBL1
ZNF605
EXD2
SMARCAL1
PPP1R12C
ARHGEF1
PPP6R1
SRD5A1
EMC4
TRIP4
RPL18A
KRT23
MRPS23
SEC13
COPS7A
TRMO
GSTO2
VPS25
TOP2A
SMARCD2
SELENOH
PABPN1
DLGAP1
DHX8
RPAIN
NUP88
TXNRD1
CD2BP2
PEAK1
NOP16
HMG20A
HIGD2A
LYRM4
FARS2
AP2M1
SSBP2
MRPS18C
HELQ
TMEM160
USP48
CIAO2A
VEZT
FGD6
BPNT1
SMAD3
RPL37
EPS15
CRADD
STAM2
FBXW11
INO80C
COPS7B
ATP5MG
H2AC19
H2AC18
CCNL1
ZNF211
SYT7
SLC39A9
MTMR9
ERH
SLC25A19
NDUFA10
CAPS2
USP30
PRORP
PPP2R3C
RCAN1
KLLN
CCL3
MARS1
ARHGAP9
H4C4
DMAC1
NDUFB3
MTRF1
INTS10
FAM126B
ZCCHC4
MYOM2
TPRKB
MAF1
METTL26
LTN1
TM9SF4
STK25
GABPB2
DYNC2I2
RABAC1
ZNF688
XAB2
SESN1
GUF1
CEP57L1
TOMM40L
ARHGEF2
TBP
PSMB1
ZNF420
ZCCHC8
TRAPPC9
VARS1
VRK1
PSMC5
FTSJ3
FCF1
AREL1
TOR1AIP1
GORAB
PLEKHM3
SF3B3
COG4
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
LTA4H
HSPA9
CWC27
HEMK1
ZNF628
NR1H3
ACP2
API5
ZSCAN5A
RPL21
BMERB1
NFATC2IP
EIF4A1
ABT1
TJP3
SF3B5
NVL
ZC3H6
PROSER3
HSPB6
ZNF286A
UTP3
RBM28
RPGRIP1L
FTO
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
CGGBP1
ACTL6A
NMNAT1
LZIC
ALKBH3
ZSCAN32
ZNF174
XPNPEP3
ST13
ZNF548
LNPEP
ATP6V1G1
ATP2C1
PEX3
ADAT2
KLF6
TMEM256
FLOT1
ABCF2
CENPA
HBP1
RPL14
MED24
ADPRS
FUT10
CCDC59
TMEM63C
RAB5C
RAP2B
PRDM15
CCL5
TXNL4B
TIMMDC1
DHX38
ASXL1
ALG10B
SMCO1
CXCR5
MPV17L2
MCAT
DPP9
CNOT1
ADO
UQCRC2
TPGS1
PEX26
ZNF56
RTRAF
RTF2
KCTD5
MTRNR2L1
ILF2
NCOA7
KANSL3
VPS52
RPS18
PDE6D
TTC33
TRMT10C
TGIF1
COX7A2L
TRAPPC3
USP3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
HEXA
FSD2
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
NUP153
MED23
MAP2K3
CELF3
SLC33A1
ZNF608
CMSS1
PARP2
BTRC
SNRPD3
LAMP1
GUCD1
EML2
DOLPP1
LRRC14B
GCLC
FMO4
DHX33
AQR
AP1G1
MNT
POLG
MRM3
GLOD4
SNX15
MRPL1
DCP1B
C2orf42
HSD11B1
INSR
PXMP2
POLE
FAAP24
CEP89
TPST1
RPS13
IFIT1
COPS8
TP63
LAS1L
CCDC77
ZNF26
WBP1L
MRPL20
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
ZNF451
WAPL
GALK2
COPS2
TYK2
SMG5
RTEL1
PSMD4
KDSR
TLR5
TIMM22
SMARCE1
RAD51AP1
NR1H2
MPND
CWC25
C12orf4
UBB
RBM25
PRPF18
WDR83OS
WDR83
TUT1
TMX2
SPTLC3
MED19
KIF16B
FDPS
ZNF749
ZNF609
ZBTB38
EPRS1
ZNF565
ZNF146
SCYL3
MRPL44
ZNF552
RAP2A
GEMIN6
CRB1
C16orf72
KIF22
COPZ1
ARNTL
ZMYND8
SPC25
RAD51AP2
FOS
ZNF226
SAP30BP
RECQL5
FAM156B
FAM156A
NFKBIL1
MYCBP2
ATP6V1G2
NCDN
MFAP3L
KIAA0319L
CDK8
ATP5MC2
TSC1
TDRKH
RPL29
RAB40B
GFI1B
DVL2
ZNF584
ZNF419
RANGAP1
RABL2A
MAMSTR
FOXP2
DHX16
WBP2
KLHL20
CLEC7A
SART1
ATG4C
ACBD4
UNC93B1
TBCK
STOML2
MED6
AIMP1
RARB
HAX1
C3orf38
ATXN2L
CYP2R1
TMEM109
SNAPC3
PSMD1
IFI44L
DDR2
TLDC2
CSTF1
AURKA
SH3GL1
GABARAP
PSAP
NDUFAB1
NDUFA2
IK
ECT2
TOMM40
TFB2M
MTR
KCNN3
FBXW9
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
SLMAP
HIRIP3
CHD6
TAF6
PTGES2
PNISR
IDH3B
DESI2
CNPY4
ASB4
ABCB8
TCF3
PPP1R37
GPR89A
GOLPH3L
FAM207A
ADRM1
PPIL3
NSMCE3
NIF3L1
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
RPS12
CDC23
ARL1
TTC21A
MTBP
MRPL13
GORASP1
AP3S2
AMOTL2
VPS4B
UBQLN1
SOD1
CEP128
SACM1L
CWC22
MAPK14
TMED10
NSA2
NCBP2AS2
NCBP2
GFM2
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
JMJD4
DUS3L
RNF43
RFC4
PTBP1
PRMT1
MRPS15
DPH2
DMAP1
CDKN2D
ATG101
ZNF112
ZMPSTE24
THADA
NUCKS1
NGDN
ISOC2
FRYL
EHMT2
CLEC16A
CCDC61
C2
SPNS1
POLR2J3
KEAP1
FBXO8
CEP44
UBE2T
TAF3
PTCD3
POLR1A
NDUFAF1
MVB12A
INO80B
GTF2H2C_2
GTF2H2C
DNAJC14
DCP1A
C10orf143
NUP214
NOLC1
LOC101927572
CCNC
C12orf73
ALKBH6
ZNF570
RPS26
PGP
OPA3
NOXA1
MORC3
HARBI1
GGCT
DAPK3
ATG13
SSU72
PRKCI
LY9
HSPA13
EIF4A2
BCAS2
ZNF571
ZNF540
TMEM101
SH3BP4
RPL26
RNF187
PDE12
LRRC45
CENPX
TPD52L2
TNFRSF17
PRICKLE4
NPIPB2
KAT7
INTS4
FRS3
C12orf57
BET1
TDP2
SPAG7
RPS27
RER1
MORN1
FLT3LG
ACOT13
TRAPPC6A
TLR4
RBM6
N4BP2L2
GTPBP3
FDXR
EXOSC4
BLOC1S3
B4GALT5
ANKRD40
ZC3HC1
UCHL5
TRNAU1AP
TRMT2A
TIPRL
RO60
RANBP1
KLHDC10
KDM4D
KAT6A
DARS2
CWC15
CHMP2A
CENPL
PSMD5
MLLT1
KNL1
KCNH1
ZNF76
U2SURP
TIMM13
SLC4A2
RPA2
RBSN
RABEP1
NOP53
MRPL54
CREM
CHD8
CDK5
APBA3
UQCRH
TSACC
LRRC41
FBXO38
CXXC1
CCT3
RABL2B
RAB11A
WDR53
WASF1
SPRY1
RNF5
HEXIM1
GOT1
FBXO45
CDC40
AGPAT1
ZNF830
VPS72
TRAF3IP3
NOL6
MKNK2
MIS18A