ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MTRNR2L8
MTRNR2L2
MSH3
DHFR
KDM6B
ACSL5
NDUFS1
EEF1B2
SCRT2
CRYBG2
MTRNR2L1
RGPD1
RGPD2
NEK2
PHF12
PRR3
GNL1
LTB4R2
LTB4R
CIDEB
MIA2
SKIV2L
NELFE
SLC9A3R1
ATXN7L1
CCDC90B
SH3D21
SFRP5
INAVA
MTRNR2L9
SEPTIN4
RPS3A
CCDC107
SCARB1
GPX4
URGCP-MRPS24
URGCP
CSTF1
AURKA
CDC14B
KNL1
WDR36
RAPGEF1
CPLX2
CENPVL2
CENPVL1
DNAJC25-GNG10
DNAJC25
DKK4
MMACHC
CCDC163
ERBB3
SF3A3
PTP4A1
ABLIM1
LBX2
LASP1
RPL34
NEK6
SELENOP
PPIP5K2
GIN1
PHC2
ZSWIM3
ACOT8
CERS2
TNFRSF10B
NCOA4
PRKCD
C19orf12
SPON1
TMEM169
PECR
NQO2
PTPRF
SMARCD2
RPP25L
MRPS28
NR1I3
B3GNT3
FAM3C
RAB17
ROCK2
IST1
YARS1
S100PBP
EXOC1
C11orf24
ZBED9
RBBP5
USP2
SAXO1
RRAGA
LENG8
ACY1
MVP
CD2BP2
NCS1
GAB1
CLCF1
CEP128
DBP
SPATA18
ULK4
SP2
MEAK7
SEC13
ARPIN-AP3S2
ARPIN
SIAH2
C1QTNF1
HDGF
KRTAP5-7
UBE2R2
COPS4
GJB1
ADAMTS6
KDM3A
ADI1
KIAA2013
TNFRSF1A
TRIM2
TNPO3
CHST11
MMADHC
AFF1
NUP107
RBP2
SH3D19
SEC23A
ERICH3
RFX2
SLC20A1
TJP3
FAM228B
SF3B6
CDHR2
RBKS
BABAM2
PRDM10
NFIL3
CSNK1A1
YJU2
INTS4
RFFL
MAP1LC3C
MAN2C1
ADGRF3
SELENOI
CLASP1
METTL7B
RARA
VPS54
CAMK2G
PAX2
GOLGA4
PGLYRP2
FUT5
ARNT
TTC31
LOC100509620
RIPK4
GUCA2A
ZC3H12D
GUCD1
OCIAD2
TIGD3
SPTBN1
ATL1
MAP4K5
AMN1
TMEM120A
PRXL2A
EIF1AD
BANF1
TINAGL1
PDXP
MBD3
S100A16
GDPD1
ZNF827
PRKCI
RABGGTB
NUDCD1
ABCC3
APBA2
EIF4A2
PRKCSH
CCDC151
TDP2
ACOT13
PEX11G
CA7
ALG10B
BAAT
SLC27A5
ALDH3A2
CCND2
BORCS7
CYP17A1
CCNI
JUND
LSG1
TLCD4-RWDD3
TLCD4
CIBAR2
BCL9L
POLD4
HOXA3
SMAGP
ABR
RPS7
CA9
ARHGEF39
U2SURP
YAP1
MYRF
PEMT
PSMA5
CD86
PJA2
ACAA2
POLDIP3
POLR1H
RPL7
RDH10
P3H4
FKBP10
SHTN1
TKFC
DDB1
STK40
SLC7A5
LSM5
SLC1A3
RAB30
RCOR1
RNF121
LOC100133315
C2CD2L
RAB11FIP4
SCNM1
LYSMD1
RPS26
HEXIM1
TIMM9
KIAA0586
MRPL2
KLC4
CPHXL
PTS
NDRG1
RPL23A
RAB34
TTI2
MYL3
C1orf174
PPP1R9B
FAM43A
LAPTM4A
VGLL4
DHX36
TTC9B
ZFP36
PLEKHG2
MPI
SPDYE14
SPDYE10P
MLLT10
TMCO1
DGKD
C2CD2
MLF2
PIM3
TBC1D10A
HAAO
PKP4
CCDC148
HNF1A
VIL1
IQANK1
FAM83H
AGMAT
ABCC6
CNNM3
SPATA25
NEURL2
CTSA
GET1
ZNF567
ZNF232
USP6
CARHSP1
KIF21A
TATDN3
NSL1
SCAF11
VTN
SARM1
PCYT2
SEBOX
PCNX3
MAP3K11
SMG5
GLMP
FGFR3
AQP11
APOB
EDEM1
PINK1
DENND2B
F10
SHISA5
RAB37
ORC2
GCLC
ECHS1
SLCO2B1
PABPN1
PCGF1
AHCY
NRL
DCAF11
GSDMD
F7
MGST2
HADHB
HADHA
SRSF11
LRRC40
AHSG
CDKN2AIP
AP1AR
ACY3
ACOX2
RHEX
SMPDL3A
ERBB2
NUMB
SLC7A7
PPP5D1
CALM3
GAMT
ZBTB48
PLXNB2
PLEKHG6
VAMP5
SECTM1
KIF1C
INCA1
C9orf64
ENTPD8
AP1M1
GPR171
FYB2
CTDSP1
NID1
SUCLA2
ZNF219
CREB3L3
EPS8L2
DEAF1
PDGFB
DNAJC22
EPHX2
NR0B2
GLRX
LOC102724265
DENND5B
UBR4
C1GALT1
DOK4
CDK3
PRUNE1
MINDY1
KANK1
ZNF214
NLRP14
IGSF23
RAP1GAP
PHETA1
PANK1
ASGR2
SLC2A14
NEK4
ITIH1
CBS
XYLB
HEXB
SLC45A4
TRAF7
LARP1
ANKS4B
NDUFA6
PDE11A
PSPN
ALKBH7
MLXIPL
CFB
ATXN7
WEE1
AJUBA
ZFAND2A
SLC19A3
AKAP1
FCHO2
PRMT1
ISOC1
PPIL2
PUS10
PEX13
DOCK6
LRRC1
GDI2
TRIM14
BCAR1
RAB32
MMP15
ABCD3
CDIP1
FASTKD1
TCIRG1
TMEM177
CHST13
C3
RIN3
IQGAP2
ANXA9
PPP1R27
MCRIP1
IL32
EPS8L3
LSM1
BAG4
CLIP2
LURAP1L
HSPE1-MOB4
HSPE1
HSPD1
MSH5
CLIC1
MGAT1
OSBP
GATA3
IFNGR1
AGT
ATP7B
TBC1D22A
SDCBP2
CA5A
PDF
HJV
NEU4
UGDH
GALT
RAB43
APOA1
ZNF184
KLHDC2
PERP
HMGCS1
TRPM1
SCLY
ALG11
ASL
NR1D1
RGS3
ZNF710
LRRC3
GLYCTK
GNG4
GNAT1
PEPD
IL11RA
HNMT
TM4SF5
PALM3
ETFA
DOCK5
TRIM15
TRIM10
CPNE7
ETFB
SEPTIN9
TMEM253
DMAP1
CPPED1
SLC35D1
PIEZO1
CAPN2
CYB5R3
KHNYN
CBLN3
RBP5
DHRS3
MAN1A1
TST
MPST
CDR2
VWCE
TACR2
SARDH
DPP6
MYD88
ACAA1
INF2
SMLR1
CBY3
MBL2
CORO1C
LRP1
PXYLP1
PLEC
RBMS1
SLC28A1
INHBE
TMBIM1
APOC3
VEGFA
MRPL20
MAF
DZIP1
STARD7
PAAF1
COA4
TADA1
STAT5B
MACC1
SLC6A12
POLR3H
PALM2AKAP2
IL7
CLDN14
PDLIM2
GIPC2
MOV10L1
PLEKHB2
TRAF4
GTF2I
AGPAT3
ZNF764
GPT
STAP2
MPND
IRF2BPL
FNIP1
TRIM47
DONSON
LOC100129484
KDELR2
SCN9A
RNF126
RASSF5
B4GAT1
MST1
LZTS3
ERF
SMIM19
SLC20A2
CRK
SERINC2
SNRPD3
TFR2
LCAT
H4C3
H1-6
UHRF1BP1L
PLG
AFP
PLA2G4C
FRG2C
MYL12B
PROZ
NGEF
UBA6
ADRB3
KIAA1522
LIME1
SLC36A1
TMEM254
CPNE6
TK1
SPATA2
MAGI2
SLC2A4RG
HGD
CCL16
LOC102723360
RUVBL1
DPYSL4
RCAN1
ENTPD2
PTGDR2
C2orf88
NRXN2
LY6E
ZDHHC19
SLC51A
USP18
PRAP1
RBFOX2
AMACR
DNMT3A
RBIS
LRP5L
SNTG1
LPP
MUC20
OTOG
HINT1
PDPK1
SPAAR
CCNL2
APOE
LINS1
ASB7
GGT1
EEFSEC
TJAP1
SERPINB1
PTMS
LAG3
ZFAND2B
C11orf86
QPRT
TMPRSS2
IDH1
FGFR4
SEC16B
USH1C
HSD17B11
PKLR
PHACTR4
IGF2BP3
ANK3
SH3YL1
ACP1
SPPL2A
RNF217
MYADM
SLC9B2
CLDN19
GPER1
SMAD3
CCDC142
JOSD2
ASPDH
SPPL2B
LSM7
PTPA
CRAT
PAK4
SLC12A9
EPHB4
NPPA
F12
BLOC1S5
ZNF512B
BAIAP2L2
ARHGAP27
AHDC1
TAOK3
SUDS3
SOD2
ERGIC1
IL1R1
ADGRG7
GRTP1
PGPEP1
ABAT
N4BP2L1
EFNA2
SH3BGRL2
INTS9
HMBOX1
SHFL
TRMT2A
RANBP1
OXCT2
VTA1
NMBR
MRPS11
MRPL46
EIF4G3
SLC22A3
SOS1
SERPINF1
HRCT1
ZNF362
MRGPRF
SNRPA
C19orf54
GPRC5C
PLIN1
GPR35
RNF103-CHMP3
RMND5A
SMARCB1
NR1H3
ACP2
MIDN
PNOC
GNA11
HPCAL1
ADGRG1
SLC12A7
EFNA1
TRAF3IP2
ATP5F1D
TECTB
UCKL1
MTFMT
TMEM139
CASP2
ADD3
TNFAIP8L1
CSRNP3
KRT8
CALML3
NIPSNAP1
BMF
TACO1
C1orf210
EGLN1
TCAF1
SLC47A1
RFX8
ZNF444
TNXB
SLC2A9
KCNJ15
SLC10A1
AK3
SLC17A9
MIA3
C5
C2orf42
SPON2
ANKRD39
TMEM17
GPBAR1
CAMSAP3
PRKAR1B
SORBS2
TPRN
MBLAC1
REEP6
PCSK4
UBA5
AAMP
DIDO1
LOC644090
NFATC2
HAGH
FAHD1
ANXA6
POLR2H
GALK1
VANGL1
CYP8B1
ITPKA
PNPLA3
ZBTB4
VMO1
GLTPD2
APOC4
APOC2
IL17RB
CHDH
ZNF564
THAP12
GVQW3
CLCN2
GCHFR
COBL
WDR81
TMEM127
CIAO1
GAL3ST3
WDR90
SF3B2
AKT2
TNS3
CNOT1
ZBED1
DHRSX
FST
SLC35G6
POLR2A
SLC39A14
GLB1L3
TMEM71
PHF20L1
PACSIN3
CLDN3
CPT1A
OPA3
PRR35
SERTAD2
MIEF1
MFN2
PLXNC1
ITPKC
COQ8B
FETUB
CLSTN3
ACAD11
ZFYVE27
COMTD1
DAO
DOK7
PLA2G12B
NR2F6
TMEM150A
IQSEC1
MTMR4
ZBED4
CAMK1
CCDC71
C18orf21
CYB5A
TLCD2
UMPS
DIP2C-AS1
NUP210
GFM1
CTSO
POMGNT1
LURAP1
PLXNB1
BLCAP
PCDH1
LEAP2
ACOT2
CDC42BPA
TRAPPC10
RWDD3
PDXK
UGGT2
PDZK1
SPG7
MIDEAS
ASGR1
ASAH1
DLX2
POLR2E
APOA4
C4BPB
AIFM2
SCYL1
FTCDNL1
NCR3LG1
BRIP1
DCBLD1
RASAL3
CALML4
TRIM25
PELO
ITGA1
DNAJB3
C1QTNF6
PIK3R2
FBXO31
F2
PLK2
LOXHD1
RIPK3
SMIM11B
SMIM11A
GDF15
E2F5
DNAJB1
TMEM203
NDOR1
STK24
TUBG1
RETREG3
NQO1
TDRD10
SLC39A5
DRG2
CACNB2
DLC1
TM6SF2
IL20RB
OTULIN
TMEM220
NECTIN4
NSUN5
CSRNP1
AMT
TOB2
RASA4B
BIRC2
FOXP1
COL13A1
CRPPA
PRM2
PRM1
PPFIBP2
FAM20A
PTK7
ATXN1
TECR
WDR97
MAF1
ACO1
KDM2A
ACSF2
LMNA
PLIN4
GPR37
TMEM63A
ITPK1
POLRMT
DOLPP1
SUSD3
PICALM
NOXO1
GFER
CRTC2
NT5C3A
SOX10
RASA4
CMIP
PYROXD1
DECR2
SLC26A1
RDH5
BLOC1S1
ABCA5
PIPOX
PMVK
ANXA2
ATP11A
KIF21B
EPHX1
ZC3H3
IQCN
CAMKK2
TREH
NHSL1
ATOX1
PROCR
PUS3
DDX25
GLI1
MTMR11
GATA4
SENP1
PFKM
C4B
C4B_2
MLANA
COMT
METTL8
DCAF17
AMBP
MBNL2
PTTG1IP
LCE2D
ZNF747
C19orf33
MEX3A
SLC46A1
MTFR2
PROS1
NET1
UGT1A1
CSF3R
C8orf58
SHF
KIAA0754
ZNF839
OGFR
VPS28
RNF220
FUOM
ATXN2
SLC25A38
SLC22A7
NFATC3
TRIP10
GPR108
TBCCD1
DNAJB11
AMN
WFDC3
DNTTIP1
ACACB
IRF2
SH3BP2
SERPINA1
CYP4F3
NUDT8
MRPL40
HIRA
ABCA4
GPD1
DTX4