ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

MTRNR2L8
MTRNR2L2
MSH3
DHFR
KDM6B
ACSL5
NDUFS1
EEF1B2
SCRT2
CRYBG2
MTRNR2L1
RGPD1
RGPD2
NEK2
PHF12
PRR3
GNL1
LTB4R2
LTB4R
CIDEB
MIA2
SKIV2L
NELFE
SLC9A3R1
ATXN7L1
CCDC90B
SH3D21
SFRP5
INAVA
MTRNR2L9
SEPTIN4
RPS3A
CCDC107
SCARB1
GPX4
URGCP-MRPS24
URGCP
CSTF1
AURKA
CDC14B
KNL1
WDR36
RAPGEF1
CPLX2
CENPVL2
CENPVL1
DNAJC25-GNG10
DNAJC25
DKK4
MMACHC
CCDC163
ERBB3
SF3A3
PTP4A1
ABLIM1
LBX2
LASP1
RPL34
NEK6
SELENOP
PPIP5K2
GIN1
PHC2
ZSWIM3
ACOT8
CERS2
TNFRSF10B
NCOA4
PRKCD
C19orf12
SPON1
TMEM169
PECR
NQO2
PTPRF
SMARCD2
RPP25L
MRPS28
NR1I3
B3GNT3
FAM3C
RAB17
ROCK2
IST1
YARS1
S100PBP
EXOC1
C11orf24
ZBED9
RBBP5
USP2
SAXO1
RRAGA
LENG8
ACY1
MVP
CD2BP2
NCS1
GAB1
CLCF1
CEP128
DBP
SPATA18
ULK4
SP2
MEAK7
SEC13
ARPIN-AP3S2
ARPIN
SIAH2
C1QTNF1
HDGF
KRTAP5-7
UBE2R2
COPS4
GJB1
ADAMTS6
KDM3A
ADI1
KIAA2013
TNFRSF1A
TRIM2
TNPO3
CHST11
MMADHC
AFF1
NUP107
RBP2
SH3D19
SEC23A
ERICH3
RFX2
SLC20A1
TJP3
FAM228B
SF3B6
CDHR2
RBKS
BABAM2
PRDM10
NFIL3
CSNK1A1
YJU2
INTS4
RFFL
MAP1LC3C
MAN2C1
ADGRF3
SELENOI
CLASP1
METTL7B
RARA
VPS54
CAMK2G
PAX2
GOLGA4
PGLYRP2
FUT5
ARNT
TTC31
LOC100509620
RIPK4
GUCA2A
ZC3H12D
GUCD1
OCIAD2
TIGD3
SPTBN1
ATL1
MAP4K5
AMN1
TMEM120A
PRXL2A
EIF1AD
BANF1
TINAGL1
PDXP
MBD3
S100A16
GDPD1
ZNF827
PRKCI
RABGGTB
NUDCD1
ABCC3
APBA2
EIF4A2
PRKCSH
CCDC151
TDP2
ACOT13
PEX11G
CA7
ALG10B
ALDH3A2
SLC27A5
BAAT
CCND2
BORCS7
CYP17A1
CCNI
JUND
LSG1
TLCD4-RWDD3
TLCD4
CIBAR2
BCL9L
POLD4
HOXA3
SMAGP
ABR
RPS7
CA9
ARHGEF39
U2SURP
YAP1
MYRF
PEMT
PSMA5
CD86
PJA2
ACAA2
POLDIP3
POLR1H
RPL7
RDH10
P3H4
FKBP10
SHTN1
TKFC
DDB1
STK40
SLC7A5
LSM5
SLC1A3
RAB30
RCOR1
RNF121
LOC100133315
C2CD2L
RAB11FIP4
SCNM1
LYSMD1
RPS26
HEXIM1
TIMM9
KIAA0586
MRPL2
KLC4
CPHXL
PTS
NDRG1
RPL23A
RAB34
TTI2
MYL3
C1orf174
PPP1R9B
FAM43A
LAPTM4A
VGLL4
DHX36
TTC9B
ZFP36
PLEKHG2
MPI
SPDYE14
SPDYE10P
MLLT10
TMCO1
DGKD
C2CD2
MLF2
PIM3
TBC1D10A
HAAO
PKP4
CCDC148
GET1
ZNF232
USP6
HNF1A
AGMAT
IQANK1
FAM83H
SPATA25
NEURL2
CTSA
CNNM3
VIL1
SCAF11
ZNF567
CARHSP1
TATDN3
NSL1
PCNX3
MAP3K11
ABCC6
KIF21A
SMG5
GLMP
APOB
PCYT2
AQP11
VTN
SARM1
SEBOX
FGFR3
PINK1
DENND2B
F10
SHISA5
EDEM1
PABPN1
GCLC
ORC2
AHCY
SLCO2B1
CDKN2AIP
RAB37
GSDMD
ABCD3
VAMP5
HADHB
HADHA
NRL
DCAF11
SRSF11
LRRC40
ECHS1
RHEX
ENTPD8
GAMT
PCGF1
AP1AR
PPP5D1
CALM3
MGST2
ACY3
F7
UBR4
PLEKHG6
SMPDL3A
SLC7A7
ACOX2
CTDSP1
ZNF219
NUMB
ZBTB48
ERBB2
AHSG
SUCLA2
C9orf64
XYLB
FYB2
SECTM1
DENND5B
RAP1GAP
ATXN7
DOK4
C1GALT1
NDUFA6
PLXNB2
KIF1C
INCA1
NID1
ZNF214
NLRP14
DNAJC22
LARP1
CREB3L3
NR0B2
AP1M1
EPS8L2
DEAF1
GPR171
PDE11A
EPHX2
KANK1
GDI2
PHETA1
PDGFB
HEXB
GLRX
IGSF23
MMP15
TRAF7
ISOC1
LRRC1
PRUNE1
MINDY1
LOC102724265
MLXIPL
CDK3
NEK4
ITIH1
PRMT1
ANKS4B
PANK1
CDIP1
PPIL2
RAB32
CFB
BCAR1
DOCK6
SLC45A4
ASGR2
WEE1
AKAP1
SLC2A14
CHST13
SLC19A3
MSH5
CLIC1
ANXA9
PUS10
PEX13
FCHO2
UGDH
EPS8L3
TCIRG1
TMEM177
CBS
CLIP2
AJUBA
RIN3
ATP7B
PSPN
ALKBH7
ZFAND2A
IFNGR1
TRIM14
FASTKD1
C3
GATA3
HSPE1-MOB4
HSPE1
HSPD1
IL32
LURAP1L
IQGAP2
TBC1D22A
MGAT1
ALG11
NEU4
PPP1R27
MCRIP1
STARD7
GNG4
AGT
HMGCS1
TMEM253
ZNF184
SDCBP2
APOA1
LSM1
BAG4
CPPED1
GIPC2
OSBP
PERP
CPNE7
KLHDC2
PDF
RGS3
NR1D1
RAB43
MAN1A1
CA5A
IL11RA
CYB5R3
ETFA
SLC35D1
PALM3
HJV
INF2
SCLY
SEPTIN9
TRPM1
DOCK5
GNAT1
CORO1C
TMBIM1
HNMT
DMAP1
ZNF710
GLYCTK
GALT
ASL
TM4SF5
PEPD
PALM2AKAP2
PDLIM2
TST
MPST
IL7
LRRC3
DHRS3
RBMS1
TRIM15
TRIM10
MYD88
ACAA1
RBP5
VEGFA
VWCE
FNIP1
APOC3
CBY3
PAAF1
COA4
SARDH
DPP6
ZNF764
MACC1
ETFB
MRPL20
C2orf88
SMLR1
LRP1
TACR2
STAT5B
KHNYN
CBLN3
UHRF1BP1L
CAPN2
PIEZO1
DONSON
PXYLP1
GPT
STAP2
MPND
POLR3H
CDR2
IRF2BPL
MBL2
RNF126
INHBE
DZIP1
TRIM47
DNMT3A
SLC28A1
KIAA1522
GTF2I
TRAF4
SLC6A12
MOV10L1
SERPINB1
PTPA
CRAT
TADA1
LOC100129484
ENTPD2
PLEC
LZTS3
MAF
MYL12B
LIME1
CSRNP1
IGF2BP3
PLEKHB2
UBA6
NGEF
SLC2A4RG
ERF
HSD17B11
CLDN14
TFR2
RCAN1
FGFR4
AGPAT3
OTOG
ABAT
B4GAT1
KDELR2
SNTG1
SMIM19
SLC20A2
HGD
RBIS
PLA2G4C
PROZ
SCN9A
GPER1
LCAT
H4C3
H1-6
USH1C
AFP
ZFAND2B
TMEM254
SPATA2
CRK
PRAP1
RASSF5
UCKL1
MST1
TK1
RUVBL1
ADRB3
MFN2
SLC36A1
SERINC2
SNRPD3
MAGI2
CCL16
DPYSL4
CAMSAP3
SPPL2A
PLG
CPNE6
TPRN
USP18
FRG2C
GGT1
ZDHHC19
SLC51A
ARHGAP27
AMACR
LINS1
ASB7
EFNA1
JOSD2
ASPDH
PTGDR2
GNA11
PHACTR4
PKLR
LY6E
BAIAP2L2
SPPL2B
LSM7
LRP5L
LPP
LOC102723360
SPAAR
TNXB
RBFOX2
CLDN19
SH3BGRL2
HINT1
ANK3
AHDC1
SEC16B
KRT8
CCDC142
NRXN2
TMPRSS2
CCNL2
APOE
QPRT
MUC20
ACO1
TJAP1
PTMS
GRTP1
BLOC1S5
VANGL1
EEFSEC
PAK4
SMARCB1
LAG3
SOD2
N4BP2L1
MYADM
PDPK1
IDH1
NPPA
C11orf86
ADGRG1
NIPSNAP1
IL1R1
SNRPA
C19orf54
SMAD3
TCAF1
TAOK3
SUDS3
ZNF512B
PGPEP1
SLC9B2
SERPINF1
POLR2H
TECTB
SH3YL1
ACP1
ADD3
RNF217
SOS1
CLCN2
SLC12A7
ITPKC
COQ8B
ZBTB4
VTA1
NMBR
SLC12A9
EPHB4
SLC35G6
POLR2A
SPON2
EFNA2
COBL
SLC22A3
F12
GCHFR
ERGIC1
ITPKA
HRCT1
SHFL
TMEM203
NDOR1
CSRNP3
TRMT2A
RANBP1
GPR35
PNOC
PRKAR1B
MIDN
ZNF362
ADGRG7
HPCAL1
NR1H3
ACP2
HAGH
FAHD1
NUP210
GPRC5C
ATP5F1D
ANXA6
AK3
ZHX3
INTS9
HMBOX1
MIA3
OXCT2
WDR90
MRPS11
MRPL46
C1orf210
PLIN1
EIF4G3
TRAF3IP2
PLXNC1
C18orf21
CALML3
GALK1
MTFMT
TMEM127
CIAO1
MRGPRF
CNOT1
TACO1
PRR35
GPBAR1
SLC31A1
FKBP15
RNF103-CHMP3
RMND5A
TMEM17
LOC644090
NUDT16
GAL3ST3
ZNF444
SF3B2
SLC17A9
EGLN1
AAMP
TNFAIP8L1
TRAPPC10
RFX8
TECPR1
TMEM139
CASP2
C5
C2orf42
UMPS
SLC47A1
NCR3LG1
REEP6
PCSK4
DIDO1
DIP2C-AS1
BMF
DOK7
SLC39A14
NFATC2
KCNJ15
TNS3
WFDC3
DNTTIP1
SLC2A9
SLC10A1
AIFM2
APOC4
APOC2
IQCN
SORBS2
WDR81
PNPLA3
MBLAC1
CYB5A
ANKRD39
ZBED4
ZNF564
UBA5
IL17RB
CHDH
ASGR1
DNAJB1
WDR97
MAF1
CCDC71
FTCDNL1
TM6SF2
VMO1
GLTPD2
NR2F6
LOXHD1
DRG2
ATXN1
PLA2G12B
TMEM71
PHF20L1
CYP8B1
OPA3
DAO
BLCAP
THAP12
GVQW3
MIEF1
PDZK1
ASAH1
UGGT2
SERTAD2
DLX2
MTARC1
TMEM150A
AKT2
MIDEAS
GLB1L3
ZFYVE27
TECR
NFATC3
FST
PACSIN3
IRF2
DLC1
CALML4
TREH
GFM1
CPT1A
TLCD2
IQSEC1
BRIP1
APOA4
ACAD11
ZC3H3
PIK3R2
PDXK
SUN2
CAMK1
CLSTN3
ZBED1
DHRSX
RWDD3
NT5C3A
COMTD1
SCYL1
PLXNB1
IL20RB
CLDN3
LEAP2
TBCCD1
DNAJB11
LTV1
DCBLD1
POMGNT1
LURAP1
METTL8
DCAF17
PIPOX
DECR2
C1QTNF6
TRIM25
POLR2E
PCDH1
FETUB
NQO1
MTMR4
COL13A1
OTULIN
CTSO
GDF15
AMT
PMVK
SPG7
ITPK1
SLC30A1
SLC39A5
FBXO31
RDH5
BLOC1S1
PROCR
C4BPB
STK24
ACOT2
CDC42BPA
E2F5
NOXO1
GFER
MRPL40
HIRA
PELO
ITGA1
C1orf115
SUSD3
TMEM63A
CMIP
RXRA
DNAJB3
PPFIBP2
TUBG1
RETREG3
F2
ACACB
LMNA
NSUN5
MTMR11
AMBP
POLRMT
RASAL3
SLC35D2
PLIN4
PTK7
PLK2
CACNB2
BIRC2
ADAP1
PRM2
PRM1
RIPK3
SENP1
PFKM
SMIM11B
SMIM11A
CAMKK2
TOB2
EIF4EBP3
LY75-CD302
LY75
COMT
SLC26A1
ZNF839
TMEM220
ZNF747
VPS28
TDRD10
GATA4
SLC22A7
CHD1
RHBG
MBNL2
AMN
CRTC2
CEP43
ACSF2
SLC25A38
GLI1
GPR37
OGFR
NECTIN4
FAM20A
CRPPA
KDM2A
ATXN2
SRSF4
FUT10
FBLN1
SOX10
RASA4B
CRYBG1
MEX3A
MAP2K3
MSRB1
KIAA0754
SLC46A1
VARS2
FOXP1
RNF220
MLANA
TTC38
ATP11A
BCL2L1
MARK2
MOGAT3
PICALM
PYROXD1
ATOX1
NUDT8