ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748434 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◣ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

SCRT2
MIA2
SEPTIN4
MTRNR2L8
CRYBG2
ACSL5
URGCP-MRPS24
URGCP
SKIV2L
NELFE
LENG8
CCDC107
PHF12
NEK2
EPS8L2
DEAF1
NCS1
NR1I3
ATXN7L1
C2CD2L
ADAMTS6
CLCF1
LTB4R2
LTB4R
CIDEB
NDUFS1
EEF1B2
CDHR2
C11orf86
GPX4
C19orf33
CSTF1
AURKA
PCNX3
MAP3K11
HDGF
SLC20A1
CYP17A1
CHST11
SIAH2
SEC13
SPON1
KDM6B
SLC27A5
SPAAR
HRCT1
SLC9A3R1
PLXNB2
ERICH3
MTRNR2L2
MSH3
DHFR
TIGD3
RAPGEF1
ABCC3
EXOC1
SLC41A2
SNTB2
CFL1
FCHO2
RGS3
SFRP5
AP1AR
IRX4
CAMK2G
LOC100509620
CREB3L3
S100A16
KPNA7
INAVA
FHL2
SCARB1
KIAA2013
PEMT
ITGA3
PTP4A1
ANKRD66
RAB17
TDP2
ACOT13
ERBB3
PLA2G2E
B3GNT3
SERINC2
GNAL
INTS4
CCDC90B
ACY1
ABHD12B
ROCK2
BMP1
SYT12
ZFP36
PLEKHG2
POLD4
SPG7
TOB2
CDC14B
LASP1
IL20RB
KIF4B
PCBP1
FUT5
PRKCD
C19orf12
PEX11G
RCOR2
SMIM29
CITED2
ZNF764
TJP3
ADRA1B
USP37
CNOT9
ENDOD1
ERBB2
SMAD3
RBKS
BABAM2
ARHGAP27
MTFMT
C1QTNF1
DHRS3
TNFRSF10B
ABLIM1
MIDN
ATP5F1D
PAX2
PIM3
DNAJC25-GNG10
DNAJC25
DYRK1A
TINAGL1
PLIN1
ACAA2
TMEM214
TLCD4-RWDD3
TLCD4
BAAT
ROMO1
NFS1
SLC38A10
SHTN1
INPP5J
TAB2
OXCT2
UBE2R2
ZC3H12D
SH3D21
GUCA2A
ARNT
KMT5A
PPP1R12B
PLK2
RAD50
DOCK5
MBD3
CD86
CA9
ARHGEF39
USP2
IST1
SECTM1
SH3D19
RPS3A
ATL1
MAP4K5
SMIM19
SLC20A2
ZFAND3
GPR171
SPTBN4
BLVRB
MEAK7
PHOSPHO1
GAB1
PTPRF
STAP2
MPND
ALDH3A1
ALDH2
GOLGA4
ZNF696
PRMT2
CENPVL2
CENPVL1
RASSF5
KRTAP5-7
NGRN
CCL20
KNL1
CEP152
GNB1
MTRNR2L1
TOGARAM1
KLHL28
SLC39A6
EDEM1
RIPK4
ERCC6L
ZNF219
MTMR4
TRIM55
NQO2
AFF1
PABPN1
GJB1
LHB
LBX2
MYD88
ACAA1
C2CD2
SESTD1
IGF2BP3
RASSF2
ELL
ZNF564
RNF217
METTL7B
DENND5B
CTSO
SH2D5
ZSWIM7
TTC19
C10orf90
SEC23A
RARA
TMEM171
PLCXD2
PHETA1
TMEM169
PECR
PRDM10
MPI
TBC1D10A
SH3BP5L
CORO1C
PLEKHG3
FBXO46
MLLT10
TTC31
CCDC142
RBP2
PRUNE1
MINDY1
CREBRF
DIS3L
ALDH3A2
PPP1R27
MCRIP1
SDC1
ARPIN-AP3S2
ARPIN
VGLL4
IQGAP2
SPDYE14
SPDYE10P
MVP
UBTF
OCIAD2
SGO1
DENND1B
PCYT1A
SPINT2
RGPD1
RGPD2
SELENOP
SLC19A3
TRIM2
PDE11A
SLC7A5
MTMR11
COPZ1
MYOG
VTN
SARM1
PDGFB
MGST2
PYY
NAGS
PRAP1
MRPS11
MRPL46
MIA3
SF1
TRAPPC4
RPS25
CHCHD2
CERS2
IGSF23
TACR2
BIRC2
NRCAM
WDR27
C6orf120
GSTM5
MLF2
MMACHC
CCDC163
RCOR1
PRR7
BAZ1B
LAMP3
MAFG
ADI1
NR1D1
IQCN
DCLK1
SHISA5
SERPINB1
PIKFYVE
DBP
PRR3
GNL1
SCAF11
NR6A1
HOXA3
KDM4B
BEND7
AHCY
CLASP1
PLAAT3
NEDD4L
NUDCD1
PNPLA1
ATG16L1
BORCS7
ARHGDIA
METTL27
KRT86
MIIP
LIPK
IFRD1
SRSF11
LRRC40
TRMT11
DOT1L
ANO1
GPR137
C11orf24
TDRD1
CCDC186
CD2BP2
OAF
FAM3C
IL32
POLRMT
CTSE
DHRS7B
EPS8L3
MBLAC1
KLF6
RFFL
APOA1
SPTBN1
SF3A2
PLEKHJ1
RPL23A
RAB34
APBA2
HERC5
EEPD1
RBIS
MXD3
TTI2
GFM1
FAM185A
ALDH3B1
TMEM120A
IFT74
PLAA
COPS4
PLEC
MBNL2
CPLX2
PERP
BLVRA
MOV10L1
SH3BGRL2
TIRAP
MTFR2
DNAJC22
RAB43
ALDH4A1
PYCARD
DKK4
SHPK
CTNS
VWA7
EMP1
GNPDA1
AHSP
KLRC3
MSLN
CRPPA
SMYD5
NIBAN2
C10orf105
PTS
SOD2
LY75-CD302
LY75
SLC25A28
SMARCA4
PPP1R9B
PPM1D
CDC42EP4
C2orf88
TMEM71
PHF20L1
PYGL
ASB2
MYBPH
GLTP
MFAP4
PDXP
UNK
H3-3B
PTPN23
RABGGTB
IRF2BP2
GADD45A
BEST3
FHDC1
ARHGAP32
IDH1
KRT18
IRAK2
INTS9
HMBOX1
YARS1
S100PBP
TEAD4
APOL4
TBC1D23
GLRX
UBR4
TKFC
DDB1
C1orf174
SPATA18
ROM1
EML3
PANK1
TRIM14
AMN1
DKK1
CDK11A
TPD52
PPP1R15B
BLCAP
SMARCD2
SLCO2B1
PGLYRP2
PACSIN2
ZC3H10
RPL41
SQSTM1
MGAT4B
NOSTRIN
ARTN
CPHXL
ASAP2
TUBAL3
CDC6
CBY3
RCAN1
TECTB
SFXN3
PDZD7
HPS5
GTF2H1
COQ5
CEBPG
PHC2
SOS1
PLXDC1
NCSTN
COPA
PEPD
PTK7
PRSS8
CLRN3
ISL2
CIBAR2
TNFRSF1A
MRPS30
LSM1
BAG4
WDR81
ANXA11
ERICH4
DMAC2
APOBEC1
FIGNL1
UGDH
GPT
ZDHHC8
RPL34
TBP
PSMB1
IRAG1
NECTIN1
CSNK1A1
TTI1
RPRD1B
KIF21B
TCTEX1D4
BTBD19
EGLN1
TTC36
TMEM25
GABARAPL1
ZNF512B
UFL1
KRT19
MSH5
CLIC1
PPIP5K2
GIN1
HNMT
CDKN1A
AFAP1
LOC389199
ENTPD2
U2SURP
PNPLA2
SSTR5
KIAA1549L
CIDEC
INF2
SEMA3B
WDR77
ATP5PB
LRRC1
HMOX1
PITPNM1
PRMT1
POMGNT1
LURAP1
PDGFRL
LRP1
CMPK1
ETV4
ADGRF3
SELENOI
ARSA
RPL13
EREG
HSPE1-MOB4
HSPE1
HSPD1
TMEM254
SPAG8
HINT2
CDC25A
YAP1
SFR1
PHACTR4
RNF5
AGPAT1
ADGRB1
MRPL2
KLC4
PRKAR1A
GRAMD4
HCN3
CLK2
TBCA
ACOX2
ACSL1
CHMP4B
CASTOR2
ZNF326
AWAT1
PMVK
CNOT2
KLRC2
MYRF
RSPH3
ARHGAP29
LINS1
ASB7
PARP4
IDNK
CAPN2
BLOC1S5
BRCA1
TMEM120B
IER5L
NAE1
STN1
RHOC
NFXL1
HDHD5
HKDC1
FDXACB1
C11orf1
JUND
C6orf132
CCND2
RPS15
LAMB2
CLNS1A
ARHGAP45
PSPN
ALKBH7
FRG2
GATAD1
RAB30
RUNDC3A
BEGAIN
ZBTB47
GCLC
TIMMDC1
NFIB
MAPK8
MICAL1
SLF1
KIAA0825
MLXIPL
SLC38A3
CYP26B1
NFE2L1
PPIH
SLC2A9
USH1G
ABCC2
ACIN1
C14orf119
HPCAL1
SRSF4
GAL3ST1
KIF16B
ZP3
LPIN1
TRIM6-TRIM34
TRIM6
TAGLN2
P2RY4
VPS54
TMEM17
H1-0
GCAT
PPP2R5B
FGF23
SIVA1
PJA2
CLDN4
RAB5IF
RPGRIP1L
FTO
PDPK1
OVOL1
STX18
PTK6
G6PC2
ABHD2
AQP1
MYL12B
HSD17B4
ATP5MC3
DAD1
PRXL2A
DNMBP
ZNF367
FAM86B1
SFT2D3
GADD45G
SLC35F4
SNRPF
ARPP19
TES
PNOC
ASAH1
GBGT1
RNF125
TLN2
CORO2A
MTHFS
STK11
HSPA5
KRT7
SLC26A6
DAPP1
DTX4
ZMYND8
PTGR2
SMARCE1
ACTG2
CRK
DIDO1
FAM102A
RPL26L1
PRKCSH
CCDC151
RTL10
GNB1L
DCLRE1C
LRCOL1
IBTK
C3orf52
GDA
TBX1
SCARA5
RPL27
PHF5A
ACO2
ARHGAP10
DEFB128
TRIM15
TRIM10
CERS4
KATNB1
PFN1
ENO3
KCTD14
MLPH
RASSF1
KIF21A
SLC31A1
FKBP15
USP16
OSGIN1
HAO1
CCNI
MUC5AC
IRF2BPL
FLVCR2
HNRNPH1
OGFOD2
RAB37
ZFAND2A
ZNF184
PELO
ITGA1
CMIP
RENBP
MMP20
TRPC4AP
RFT1
RFX2
PLIN4
SMARCD1
STK40
CYFIP1
GOLGA8B
VPS28
MTIF2
PPP1CC
SUCO
TRIM29
TAOK3
SUDS3
LSM14A
TOMM70
LNP1
FLVCR1
UBA5
B4GALT1
POT1
KREMEN2
PAQR4
TCP1
MRPL18
OGA
LRRC6
SLC6A9
KRT8
KDM2A
PRR5
PTDSS2
ANO9
TUBG2
SMIM14
GATAD2A
SPATA25
NEURL2
CTSA
NAT2
PWP1
PRDX6
RBM7
C11orf71
CEP128
MRPL4
STAT6
SPO11
GPD2
EFNA1
EPS8
PDSS2
CLDN14
POLR2H
CLCN2
C1QTNF6
REG4
MOGAT2
SAXO2
EFL1
ELFN2
NRL
DCAF11
PSMA5
PLA2G4C
MUC20
SLC26A1
MAP2K3
TOMM40
MRPS28
NUB1
CNIH3
PMEPA1
CYB5R3
PCGF5
WWC1
RNF114
PPP1R2
LARP1
CLIP2
LAPTM4A
CDC14A
TLN1
CREB3
RPP25L
ANGPTL4
ARHGEF5
TMOD1
IGSF9B
UGGT2
BCL9L
LOC730098
CCL27
CISD3
GLIPR1L1
CAPS2
ARHGAP12
UBC
ZBTB20
SLC50A1
RBM8A
NUAK2
SEBOX
NFKBIB
ATP13A1
RNF113B
CLPX
UBN2
DENND1A
ATXN7L3
DOCK6
PALM3
BAIAP2
SAXO1
RRAGA
POLDIP3
PPID
AP3S2
MBIP
UCK2
ISCA1
GM2A
BTBD16
MTRNR2L9
SP2
NR2E1
PRX
NQO1
SHBG
SAT2
HCAR3
USP36
KATNBL1
NDRG1
NR2F1
TRAF4
ACADM
AQP3
PPP1R37
TYSND1
RNF169
MKNK2
PLIN3
CD200R1L
TSHZ1
FAM169A
AP1M1
NUP107
FBXW5
C8G
NT5DC1
BOLA1
SPAG7
ADM
LAMA3
PLEKHB2
GLI4
FADS2
NOP9
DHRS1
FADS1
BCL2L13
MAP1LC3C
ATP6V1E1
NCOA4
ZNF230
MEF2C
FAM43A
OTOP3
SLC28A1
AMT
KIFC3
CFLAR
MYBL2
ITGA6
NEDD4
APOBEC3B
ZNF362
LMNA
ZNF747
UQCRC2
FZD5
C1orf105
ZNF207
TMEM260
RB1CC1
EVA1B
PRSS12
CA7
NEIL1
IFNGR1
LTBP3
GTPBP1
JOSD1
ATP8A1
PUS10
PEX13
SECISBP2
MLLT6
RNF212B
VEZF1
HBEGF
SLC7A8
GUCD1
SEPTIN9
COL13A1
SENP1
PFKM
CCNL1
PPME1
C2CD3
NIP7
COG8
CLU
ID3
MFSD10
C6orf47
GAPDH
GPANK1
CSNK2B
ESCO2
LGALS1
FAM184A
MRGPRF
SNRPA
C19orf54
ZSWIM8
CHCHD1
LDHA
ST3GAL4
HEPH
RUVBL1
EEFSEC
CCDC71
KIAA0754
KLHDC8B
CCDC93
PLGLB2
PLGLB1
ANKRD6
CEP85
ATAD1
BCL2L15
SHF
AMDHD2
CRYAB
C11orf52
H4C12
USP3
ST6GALNAC4
ATP6V0C
SGPP1
SLC35F3
TMC1
CCDC88B
NUMB
PPP5D1
CALM3
HSCB
ZSWIM3