ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11593784 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◢ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◣ SRX11593784: Trophoblast stem cells

◢ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Ifi205
Hoxc5
Kmt2a
1700029F12Rik
Hoxd4
Trim2
Cltc
Hoxb4
Zc3hav1l
Rnase2b
Rnf214
Serpinb9e
Cdk18
Fem1al
Stard10
Cdca7
Tbce
Zfp996
Gm13212
Stra6l
Fzd10
Nck2
Prl6a1
Slc40a1
Shmt1
Dennd1b
Gm29802
Tmem11
Saa3
Itprip
Pccb
Mtf2
Ogdhl
Tnnt3
Upp1
Tfrc
Rin2
Upk1a
Dsc2
Fgd4
Atp6ap1l
Zfp512b
Ptprs
Tmod3
Hoxb9
Stag3
Gpc2
Traf3ip2
Zfp982
Rnf128
Ift46
Hoxc4
Gm829
Nlrc3
Tbc1d2
Fasl
Smarcad1
Mllt1
Rpe
Sema4d
Utrn
Efna4
Reep3
Rock2
Olfr368
Grip1
Hdac2
Ffar4
Lrrn4
Ints6
Ogt
Eif2b5
Micu2
Dao
Mdfic
Sgms1
Gsdma3
Xntrpc
Snx24
Klhl24
Pdik1l
Mid1
Pth1r
Nr6a1
Exoc6
Rgs5
C130073F10Rik
Meis1
Vps37c
Fbp2
Slco1a6
Sh2d4b
Tsen54
Caskin2
Serpinb9g
Mgat4b
Tmem40
Tmem185b
Neto2
Ccl20
Cst9
Pou5f1
Morc3
Terf1
Prl7d1
Bmp4
Tpd52
Kbtbd6
Pygb
Gid4
H2az2
Scmh1
Atf7ip2
Arpc2
D630023F18Rik
Arg1
Trp53bp2
Gabpb2
Zdhhc21
Hsd17b2
Dppa1
Abcg2
Zfp91
Lpxn
Tdrd7
Arhgap12
Zfp280d
Atl3
Sycn
Dnm2
Rrm2
Zyg11a
Dusp6
Sh2d5
Zcwpw1
Mepce
Mmp27
Slc25a24
Olfr52
Gcnt3
Tex14
Gcnt2
Chac2
Slc7a9
Tspan9
Cwc22
Morc2a
Tes
Zfp821
Ist1
Ube2q1
Gtf3c6
Gm12789
Acp6
Cd38
Zbtb39
Amt
Ly6c1
Ak1
Foxo1
Foxred2
Osbpl9
Ehbp1l1
Cep97
Eif5a2
Zfp568
Arhgap32
Bpifc
Plin3
Ehd4
Wnt11
Tgif1
Sdf4
B3galt6
Trim44
Tasor
Zfp408
Zfp976
Mcm3
Olfr1342
Rbbp8nl
Phf11d
Ciart
Pogk
Otx1
1700067K01Rik
Dmtn
Hes1
Knl1
H4f16
Atp5mpl
Vrk1
Oas3
Hoxa4
Tti2
Rbm47
Cldn4
Tkfc
Ddb1
Specc1
Agfg1
Alpk3
Alyref2
A430005L14Rik
Olfr222
Eci3
Gchfr
Tnfrsf9
Praf2
Iftap
Eid2b
Kcnip2
Gse1
Nuak2
Cyp2g1
Pcbp4
Hacd2
Sfi1
1700008O03Rik
Sfn
Taf5
Zfp28
Fem1a
Brf2
Zscan20
Rabep2
Lama3
Cradd
Mcrip1
Cd47
Krtap2-4
Hdgf
Dlst
Myo18a
Cacnb2
Krt9
Pcnx3
Map3k11
Tex19.1
Eif3f
Abcf3
Pcyox1l
Sumo1
Mief2
Flii
Rnf130
Ivns1abp
Anapc11
Alyref
Vamp9
Sptbn1
Gsto1
Nlrx1
Elf5
Olfr298
B9d1
Zcchc7
Ifnz
D630045J12Rik
Cd2bp2
Tafa3
Calu
Lpp
Hibadh
Usp1
Gpr4
Pitpnm2
Ptk2
Trmt44
Snx12
Tlr4
Mageb16
Ccdc120
Chst2
Mrps23
Art5
AU018091
Rcan1
Zfp975
Zfp78
Plet1
1110002E22Rik
Pus3
Ddx25
Wiz
Cmc1
Tmcc1
Psap
Usf3
Depdc7
Per3
Kmt5c
Syt8
Lin28a
Thpo
Triml2
Lgsn
Nr1h3
E2f4
Ptpdc1
Herpud2
Serf1
Zkscan5
Ldb1
Znrf1
Vav3
Zfp87
Hoxa7
Nrde2
Ltbr
Tmem59
Pcbp2
Nans
Tceanc2
Alg9
Wsb2
Tpbg
Cutc
Cox15
Zfp984
Pcnx4
Abhd17a
Cdsn
AW549877
Baz1a
Plekhg3
Tph1
Fhit
Asb8
Morc1
0610009B22Rik
Eapp
Sdc4
Trip4
Csnk1g1
Duoxa2
Duox2
Insl3
Rbm25
Zmynd8
Urgcp
Trim6
Agrp
Slc7a1
Gjb3
Ctla2b
Rdm1
Plaur
Hook1
Acot11
Cd86
Slc28a3
Plag1
Ccpg1os
Ccpg1
Ppat
Zfp518b
Paics
Cop1
Arhgef2
Supt7l
Slc4a1ap
Klf16
Capns1
Uqcc2
Stk25
Eif2ak4
Ttc5
Nppb
Eomes
Tcea3
Dusp23
Lcmt2
Adal
Mtap
Senp2
Cavin3
Nudcd3
Ccdc90b
Aven
Commd1
Hbp1
Ppp2r5a
Ndst1
Plin2
Ttll11
Lmo4
Ccdc166
Gnas
Poldip3
Srf
Rrn3
Yy1
Kctd5
H4c11
Hoxd3
Gm11545
Vwa5a
Sumf1
Tent5d
Ncoa7
2610002M06Rik
Dyrk3
Aip
Tbx3
Tmem245
Adipor2
Larp1
Exosc10
Scd1
Mink1
Ccdc33
Fam107a
Dynll1
Mga
Tufm
Smad6
Deptor
Mgat5
Cdc42ep4
Rnpep
Rhox4g
Ubxn2a
Zfp281
Nes
Prim1
Atg10
Cabcoco1
Tatdn2
Hspe1
Hspd1
Raver1
Pira7
Pira6
Pira4
Pira11
Gm14548
Nanp
Relch
Tomm7
Fubp3
Dapk3
Rnf157
Mfge8
Cpne3
Mta2
Kdm3a
Epc2
Mgat4c
Cysltr1
Sgo1
Zfp148
Adnp
Usp47
St6galnac6
Gm3776
Ano8
Dag1
Epb41l5
Trim55
Ascc1
Smarcd2
Grhl2
Adora1
Agpat1
Zfp689
Eif1ad
Banf1
Trim29
Grpel2
Zfp523
Nmi
Swsap1
Gm973
Mrpl11
Kif2a
E2f6
Usp38
Nfkb1
Aox1
Fbxo15
St3gal2
Cecr2
Pemt
Dnajb1
Bid
Noct
Timp2
Setdb1
Ube2f
Slc16a5
Zfp524
Fiz1
Faf1
Cc2d1a
4930432K21Rik
Ccdc194
Rtn2
Etv2
Rack1
Ank1
Abcc1
Pih1d1
Aldh16a1
Mr1
Erbb3
Ythdf1
Prnp
Prn
Amd2
Amd1
Sertad2
Tctex1d4
Csnk1a1
Btbd19
Slc45a3
Nptx2
Zfp385b
Gas2
Fancf
Gm13285
Gm13275
Gm13287
Epcam
Tdrd1
Mlana
Slc33a1
Asf1a
P2rx4
Tssk6
Ndufa13
Glce
Dph5
Zfp143
Tdrkh
Ddx5
Cep95
Smarcal1
Klhdc4
Ptpn12
Pcsk1n
Eloc
Echdc3
Znrd1as
Znrd1
Nhsl1
Ndufs7
Cenpj
Pou2f1
Akap17b
Thg1l
H1f3
Agfg2
Vil1
Speg
Gpr180
Stx4a
Madcam1
Hdac7
Tmem101
Gpn3
Fam216a
Eef1aknmt
Jmjd1c
Luzp1
Mllt6
Phlpp2
Frrs1
Retreg2
Cnppd1
Trub2
Sdr39u1
Rbm46
Poglut3
Adora2b
Fancd2os
Mon1b
Rpl37a
Cnih3
Rbbp5
Iars2
Triobp
Hps5
Gtf2h1
Cdk6
Ajuba
Nae1
Car7
Atg16l1
2310030G06Rik
Sae1
Nin
Atp5l
Rab5b
Gpx1
Bhmg1
Zfp37
Tmem126a
H3c15
H3c14
Taf15
Zfp54
Tspan14
Shc1
Cks1b
Alms1
Tmem144
Cluap1
1700037C18Rik
Abca8b
Ypel1
Tram1
Nt5c2
Lta4h
Ina
Ifi204
Brd3
Dpysl2
Uggt1
Nrarp
Cep41
Plec
Ccne2
Utp15
Ankra2
Rps11
Ezh2
Gm2a
Zfp977
Trmt2a
Snx5
Ranbp1
Mgme1
Sec23a
Nup107
Oacyl
Gm13290
Gm13289
Wdr45
Tbc1d10c
Ppp1ca
Dennd2c
Rgs3
Prorp
Pus10
Mrpl44
Ap1g1
Dhrs13
Efr3a
Pcf11
Hnrnpa1
Diaph3
Rnf8
Tgfbrap1
Hrh1
Ank3
AI597479
Rybp
Gli2
Arhgap29
Tmem138
Cyb561a3
Tmem109
Haus6
Clta
Clic4
Slc35e4
Mrpl45
H2ac21
Zdhhc23
Tinagl1
Rpia
Plekhm3
Etv6
Clasp1
Cited4
Vax2
Smad7
Rabl6
Pdzrn3
Nfkbil1
Gm21190
Ccnj
Bnip3l
Atp6v1g2
Tmem69
Gpbp1l1
Ankrd37
Kmt2d
Hmgn2
Tfpi
Kxd1
Bud13
4931408C20Rik
Ier5
Cfap20
Pdp2
Ttc21a
Trip12
Fbxo36
H4c18
Fryl
Zpbp
Rab15
Dad1
Abhd4
Maf
Sil1
Ube3c
H3c6
Snrnp35
Arap3
Zfp612
H2-Eb2
Syne3
Pcgf5
Tiam1
Chchd5
Fam135a
Asap2
Mat2a
Ppil3
Nif3l1
Rab8a
Vps4b
Trappc5
Top3a
Smcr8
Dst
Bend6
Kctd9
Cdca2
Timm17a
Daam1
Rtn4
Acot7
Jag2
Mdk
Hoxa5
Gpr19
Rmi1
Hnrnpk
Dux
Psors1c2
Mrs2
Rnf125
Ovol1
Nup54
Zfp947
Clns1a
Cntln
Rasd2
Tmem181a
B4galt1
Arhgef3
Vps36
Igsf9
Tsc22d1
Rnf185
Lair1
Kin
Atp5c1
Piezo1
H4c14
Acvr2a
H1f2
Kbtbd7
Kmt2b
Tead1
Rsrc2
Kntc1
Tyw1
Sbds
Rab24
Prelid1
Grb2
Snai3
Ing4
Incenp
H4c8
Grcc10
Mpc1
Snx18
Enkd1
4933405L10Rik
Acp5
H2ac19
H2ac18
Adgrl1
Mat2b
Usp40
Gpbp1
Birc6
Ppp1r7
Pask
Nedd8
Gmpr2
Nfat5
Sspn
Asmt
Oasl1
Hnrnpa0
Nfyb
Kat6a
Vmn2r4
Ctnna1
Zfp341
Hsp90aa1
Stat3
Vangl2
Stat1
Nabp1
Syp
Tlx2
Mob4
Prr14l
Pfdn4
Cyp24a1
Papss1
Hsp90ab1
Tff3
Dmbx1
1810037I17Rik
Tas2r114
Ski
Vmn1r15
Serpinb12
Hoxb3
Wdr11
Clcn4
Ppp2r3a
Ssbp2
Xpnpep3
St13
Cdx1
Eif4b
H2-T3
Clca3b
Supt6
Sdf2
Vmn1r232
Tbc1d14
Olfr849
Nepn
Phc2
Cwh43
Bnip2
Raet1e
Raet1a
Dyrk1a
Smco4
Kifc1
Zdhhc7
Malrd1
Gtpbp2
Slc35e2
Elf3
Olfr1240
Spam1
Ttc28
Ltv1
Tal1
Tecrl
Sis
Olfr702
Sult3a2
Uimc1
Tmem267
Lpar1
Ifna9
Ttc17
Prepl
Mrps18c
Helq
Camkmt
Hsph1
Plekhf2
Sestd1
Hoxc6
Olfr1054
Akt2
Bnip3
Vxn
Polr2a
Bcl7b
Pth
Fcer1a
H2bc8
H2ac8
Lrig3
Hspa8
Fam90a1b
Apoo
Kifc5b
Vmn1r180
Olfr73
Fbxl2
E4f1
Prdm14
Zcwpw2
Crebzf
Azi2
Uspl1
Kcmf1
Prb1
Cstdc6
Asz1
Akr1c6
Olfr178
Igf2
St3gal4
Nr5a1
Tbx2
Olfr688
Miga1
Dlat
Cmklr1
Bahcc1
4930563M21Rik
Tma7
Fer
Ccdc51
Tfap2c
Ubb
Il12rb2
Gm5622
Fam53c
Clrn3
Themis
Ppil4
Serpinh1
Arpp21
Tspan15
Tfec
Ostf1
Nmrk1
Fzd9
Taf4
Scyl1
Cyp17a1
Vmn1r120
Stk38l
Spink5
Slc22a14
Lrrc2
Gpr34
Gad1
Foxi3
Eml6
Cnep1r1
Tmbim7
Ppp1r2
Dnaja1
Pradc1
Mrgpra4
Cct7
Setx
H2bc6
H1f4
Olfr992
Olfr281
Olfr1026
Olfr1195
Olfr1029
Mettl15
Btn1a1
Slc5a12
Klrk1
Hoxa2
Popdc3
Olfr983
Zfp251
Washc5
Vmn1r254
Vmn1r244
Rhot2
Palm
Nsmce2
Impa1
Cp
Fus
Ubfd1
Ears2
Slc10a2
Ifitm1
Calm1
Hspa1b
Cbx5
Tesmin
Prdm2
Marchf7
Hnrnpa2b1
Cbx3
Pkdcc
Lce3b
Mnd1
Tjp3
Tcaf1
Pofut1
Plagl2