ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11593785 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◢ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX11593784: Trophoblast stem cells

◣ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Hoxc5
Ifi205
Hoxd4
1700029F12Rik
Kmt2a
Rnase2b
Zc3hav1l
Trim2
Hoxb4
Zfp996
Cltc
Fzd10
Rnf214
Stra6l
Serpinb9e
Tfrc
Tbce
Dennd1b
Cdca7
Prl6a1
Ogdhl
Nck2
Gm29802
Upk1a
Stard10
Hoxb9
Reep3
Smarcad1
Fgd4
Rin2
Pccb
Cdk18
Mtf2
Fem1al
Zfp982
Gm829
Shmt1
Saa3
Utrn
Gm13212
Atp6ap1l
Ptprs
Slc40a1
Traf3ip2
Itprip
Dsc2
Mllt1
Atf7ip2
Rpe
Tnnt3
Upp1
Rgs5
Nlrc3
Klhl24
Snx24
Rnf128
Tbc1d2
D630023F18Rik
Pdik1l
Trp53bp2
Lrrn4
Tmem11
Micu2
Nr6a1
Dao
Grip1
Xntrpc
Fbp2
Morc3
Tmod3
Sema4d
Rock2
Morc2a
Ift46
Slco1a6
Sh2d5
Exoc6
Pou5f1
Ffar4
Sgms1
Stag3
Gpc2
Dppa1
Olfr368
Krt9
Pth1r
Hoxc4
Mid1
Gcnt3
Cst9
Mgat4b
Sdf4
B3galt6
Supt6
Sdf2
Fasl
Tpd52
Otx1
Ogt
Eif2b5
Sh2d4b
Dusp6
Zfp512b
Vps37c
Cwh43
Gsdma3
Mmp27
Tsen54
Caskin2
Gpr4
Zyg11a
Arpc2
Serpinb9g
Tmem185b
Slc25a24
Tph1
Zfp280d
Scmh1
Wnt11
Ube2q1
Tes
Terf1
Tdrd7
Hdac2
Zfp568
Snx12
Zfp821
Ist1
Cd2bp2
Dnm2
Tkfc
Ddb1
Zfp976
Foxred2
Arg1
Gcnt2
Usp1
Sycn
Hsd17b2
Meis1
Zcwpw1
Bpifc
Osbpl9
Alpk3
Ints6
Zdhhc21
Amt
Trim44
Bmp4
Pygb
Eif5a2
Efna4
Neto2
Mcm3
Gid4
Gabpb2
Sdc4
Depdc7
Gm12789
Thpo
Rrm2
Alyref2
Triml2
Atl3
1700067K01Rik
Hoxa4
Hes1
Zfp91
Lpxn
Larp1
C130073F10Rik
Gjb3
Ak1
Zfp975
Ehd4
Ccl20
Prnp
Prn
Tasor
Pogk
Vrk1
Tnfrsf9
Rab8a
Serf1
Abcg2
Lgsn
Tmem59
Ciart
Elf5
Mdfic
Kcnip2
Kcmf1
Ptk2
Tspan9
Deptor
Zscan20
Slc7a9
Epb41l5
Pitpnm2
Arhgap12
Cacnb2
Gse1
Trim55
Plaur
Tgif1
Lmo4
Olfr1342
Zfp977
Praf2
Eci3
Zfp28
Krtap2-4
Ehbp1l1
Knl1
Mrps23
Baz1a
Cavin3
Acp6
Cop1
Vamp9
Kbtbd6
A430005L14Rik
Trim29
Plin3
Cdsn
Per3
Ccdc166
H2az2
Cep97
Tex14
Atp5mpl
Tex19.1
Olfr52
Cpne3
Foxo1
Oas3
Zfp408
Ccdc33
Taf5
Usf3
Bid
Ubxn2a
Vav3
Mgat4c
E2f6
Chac2
Gsto1
Fem1a
Mcrip1
Abcf3
Trmt44
Fhit
Ano8
Specc1
Cd38
Tdrkh
Asb8
Cd47
Sumo1
Cc2d1a
4930432K21Rik
Sae1
Sspn
Eif2ak4
Cyp2g1
Supt7l
Slc4a1ap
Cmc1
Rbm47
Rhox4g
Agfg1
Arhgap29
Gtf3c6
Nr1h3
Hdgf
Tafa3
Plin2
Cwc22
Mief2
Flii
Pcyox1l
Zmynd8
Sestd1
Hacd2
Rabep2
Cbx5
Tti2
Abhd17a
Iftap
Art5
Trim6
Cysltr1
Ccne2
Ankrd37
Tesmin
Prdm2
Ttc5
Zfp984
Pcbp4
AW549877
Rbm25
Rnf157
Uqcc2
Ldb1
Acot11
Zdhhc23
Cited4
Dmtn
Plekhg3
Dpysl2
Slc28a3
Gnas
Mga
Syt8
Relch
Agpat1
Usp38
Sptbn1
Zcchc7
Cdkn2aipnl
Maf
Calu
Mfge8
Grpel2
Cdkl3
Arhgap32
Nrde2
Nes
Dlst
Mllt6
Pcnx3
Map3k11
Eif3f
Tmcc1
Etv2
Mvd
Ly6c1
Hoxd3
Slc45a3
Eomes
Hbp1
Trip4
Csnk1g1
Myo18a
Agrp
Tmem40
Herpud2
Nuak2
Rdm1
Lcmt2
Adal
Ttll11
Senp2
Exosc10
Bin1
Cldn4
Wsb2
H4f16
Stx4a
Nup107
Mgat5
Noct
Dyrk3
Dennd2c
Ascc1
Smim40
Ppat
Zkscan5
Anapc11
Alyref
Pus3
Ddx25
Insl3
Prim1
Slco2b1
Chdh
Hoxa7
Rnf130
Fam107a
Tufm
Smad6
Acp5
Fbxl5
Ifnz
Tcea3
Rps6ka2
Olfr222
Asap2
Rbbp8nl
1700008O03Rik
Znrf1
Epcam
Vcl
Nabp1
Luzp1
Tmem144
Syce2
Gypa
Gchfr
Ltbr
Eid2b
Slc20a1
Rpp25
Sgo1
P2rx4
Phlpp2
Shroom3
Dcun1d1
Pdxp
Fzd3
Hook1
D630045J12Rik
Zfp78
Psap
Duoxa2
Duox2
Nfkb1
Rangap1
Sfi1
Dapk3
Tlr4
Chst2
Ccdc90b
Gm11545
Nin
Spop
F2r
Nvl
Tdrd1
Ezh2
Pcsk1n
Tfpi
Atg10
Cecr2
Dhx40
Nppb
Brf2
AU018091
Tjp2
Klf16
Tpd52l2
Morc1
Srf
Madcam1
Jag2
Wfdc2
Cacna1h
Lama3
Aip
Zbtb39
E2f4
Zfp947
Ttc32
Dusp23
Oacyl
Arhgef2
Dag1
Dnajb1
Acot7
Pcnx4
Sfn
Tpbg
Rmi1
Hnrnpk
Pcbp2
Vwa5a
Dynll1
Triobp
Cep41
Plekhm1
Metap1
Kap
Itgb2
Tbx3
Cdc42ep4
Dph5
Fancd2os
Ptpdc1
Zfp524
Fiz1
Aven
Nae1
Car7
Cradd
Sec23a
Niban1
Mr1
Nlrx1
Tinagl1
Arf6
Mlana
Dhrs13
Sumf1
Nptx2
Efr3a
Slf1
Erlin1
Epb41
Depp1
2210408I21Rik
Mat2a
B9d1
Commd1
Zfp148
Camk1d
Hdac7
Cutc
Cox15
Rrn3
Slc35f5
Eapp
Hibadh
Pih1d1
Plet1
Mageb16
Plag1
Nmi
Zfp385b
Vax2
Kbtbd7
Tcp11l1
Mkx
Lipe
Glipr1
Cops7a
Arap2
Ifitm1
Fam107b
Tyw1
Aox1
Echdc3
Pou2f1
Sbds
Nans
Rnf125
Sugt1
4931408C20Rik
Jmjd1c
Fbxo15
Tssk6
Ndufa13
Ivns1abp
Wiz
Syne3
Trank1
Rab42
Erbb3
Fryl
Polr3b
Hmgn2
H4c11
Kmt5c
Ercc6
Cabcoco1
Timp2
Rpl37a
Cluap1
1700037C18Rik
Tmem252
Scrn2
Msantd3
Swsap1
Speg
Taf15
Cntln
Atp1a1
Cnih3
Pdp2
Gm13285
Retreg2
Cnppd1
Gm13290
Gm13289
Adgrl1
Sertad2
Slc25a53
Urgcp
Tatdn2
Pira7
Pira6
Pira4
Pira11
Gm14548
Gm13275
Rasd2
Vmn1r213
Radil
Hdgfl3
Gm13276
Sparc
Zpbp
Prkar2a
Otub1
Dux
Mpp4
Tmem109
Rnf8
Zfp692
Uggt1
Cmss1
Kctd5
Adnp
Pdcd6
Smad7
Ccdc107
Dusp2
Gm973
Prkag2
Olfr298
Gm3411
Cyb5r1
Nfat5
Asmt
Oasl1
Hnrnpa0
Nfyb
Kat6a
Vmn2r4
Ctnna1
Zfp341
Hsp90aa1
Stat3
Vangl2
Hspe1
Hspd1
Stat1
Syp
Tlx2
Mob4
Vil1
Prr14l
Pfdn4
Cyp24a1
Papss1
Hsp90ab1
Tff3
Dmbx1
Tmem69
Gpbp1l1
1810037I17Rik
Tas2r114
Raver1
Ski
Vmn1r15
Serpinb12
Hoxb3
Wdr11
Clcn4
Ppp2r3a
Ssbp2
Xpnpep3
St13
Cdx1
Eif4b
H2-T3
Clca3b
Rtn4
Vmn1r232
Tbc1d14
Prl7d1
Olfr849
Nepn
Phc2
Bnip2
Raet1e
Raet1a
Dyrk1a
Smco4
H3c6
Kifc1
Zdhhc7
Malrd1
Gtpbp2
Slc35e2
Elf3
Mepce
Olfr1240
Spam1
Ttc28
Ltv1
H3c15
H3c14
Tal1
Tecrl
Ddx5
Cep95
Sis
Olfr702
Nudcd3
Sult3a2
Poldip3
Uimc1
Tmem267
Lpar1
Zfp523
Ifna9
Phf11d
Ttc17
Prepl
Mrps18c
Helq
Camkmt
Hsph1
Plekhf2
Hoxc6
Sil1
Olfr1054
Akt2
Ccdc194
H2ac19
H2ac18
Bnip3
Vxn
Polr2a
Bcl7b
Pth
Fcer1a
H2bc8
H2ac8
Lrig3
Hspa8
Fam90a1b
Apoo
Kifc5b
Vmn1r180
Olfr73
Fbxl2
E4f1
Prdm14
Zfp518b
Zcwpw2
Crebzf
Azi2
Uspl1
Prb1
Cstdc6
Asz1
Akr1c6
Fam135a
Mta2
Olfr178
Vps36
Igf2
Eloc
St3gal4
Nr5a1
Amd2
Amd1
Tbx2
Olfr688
Miga1
Dlat
Cmklr1
Bahcc1
4930563M21Rik
Tma7
Fer
Ccdc51
Tfap2c
Ubb
Il12rb2
Setdb1
Gm5622
Fam53c
Clrn3
Themis
Ppil4
Serpinh1
Utp15
Arpp21
Ankra2
Tspan15
Tfec
Ostf1
Nmrk1
Fzd9
Lpp
Mon1b
Taf4
Scyl1
Cyp17a1
Ccdc120
Vmn1r120
Stk38l
Spink5
Slc22a14
Lrrc2
Gpr34
Gad1
Foxi3
Eml6
Cnep1r1
Tmbim7
Ppp1r2
Dnaja1
Rcan1
Pradc1
Mrgpra4
Cct7
1110002E22Rik
Setx
H2bc6
H1f4
Kctd9
H4c18
Cdca2
Olfr992
Olfr281
Lin28a
Olfr1026
Bhmg1
Zfp87
Abca8b
Olfr1195
Olfr1029
Mettl15
Btn1a1
Slc5a12
Klrk1
Hoxa2
Tceanc2
Popdc3
Atp5l
Olfr983
Alg9
Zfp251
Washc5
Vmn1r254
Vmn1r244
Rhot2
Palm
Nsmce2
Impa1
Cp
0610009B22Rik
Fus
Ubfd1
Tsc22d1
Ears2
Slc10a2
Calm1
Hspa1b
Slc7a1
Marchf7
Hnrnpa2b1
Cbx3
Pkdcc
Lce3b
Ctla2b
Mnd1
Tjp3
Tcaf1
Pofut1
Plagl2
Pip5k1c
Olfr194
Kir3dl2
H1f2
Chrnb3
Cd86
Gm8764
Gm6763
Gm4340
Gm21312
Gm21304
Gm21293
Gm20765
Scaper
Csrnp2
Pip4k2b
Opcml
Epha4
Ccpg1os
Ccpg1
Paics
Mpnd
Capns1
Aig1
Stk25
Gtf2a1
Actb
Polk
Gm8978
Cert1
Prkra
Mtap
Gm4791
Vmn2r2
Vmn1r103
Steap3
Srsf11
Slc7a4
Rfxank
Pttg1
Olfr898
Olfr815
Lingo2
Krtap27-1
Kat8
Gm45929
Borcs8
Acoxl
Ndufa12
Rnaset2b
Rnaset2a
Ppp2r5a
Ndst1
Tlx3
Yy1
Shisa3
Klra7
Gucy2c
Aldh1a2
Zfp663
Stip1
Rps29
Pik3r2
Trmt61a
Olfr655
Tent5d
Slc41a3
Ncoa7
Mettl1
Eef1akmt3
2610002M06Rik
Tmem245
Adipor2
AF366264
Scd1
Mink1
Etfrf1
Casc1
Vmn1r91
Vmn1r151
Prss38
Paqr3
Olfr1453
Crb1
1700019D03Rik
Rita1
Ddx54
Tnfsf13b
Rnpep
Nlrp4a
Zfp281
Ube2b
Rsrp1
Ppig
Olfr1193
Napepld
Vmn2r111
Srsf7
Nanp
Mesp2
Klra1
Tomm7
Magohb
Fubp3
Prss30
Tnrc18
Pm20d1
Plau
Ostm1
Kdm3a
Epc2
Chmp3
Pcif1
Nup43
1810065E05Rik
Usp47
St6galnac6
Snx15
Pgam1
Olfr1220
Olfr1047
Nid2
Mbnl1
Kcnk2
Gm3776
Coq3
Cds1
Srsf3
Ikzf3
Hnf1b
H3c2
Dnajb9
Smarcd2
Grhl2
Dph3
Adora1
Zfp689
Tpcn1
Lrrc19
Iqcd
Eif1ad
Dnah5
Chordc1
Banf1
Aasdh
Speer4f2